Contig 013019:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF044I23-                                                          CCTTATGGCGGA
                      ____________________________________________________________
consensus                                                             CCTTATGGCGGA
 
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rJMFF044I23-          TCCACCTGGAGAGTTTTTTTTTTTTTTTTGCAAGTAGCTAGTGGATTGAATACATTGAAT
                      ____________________________________________________________
consensus             TCCACCTGGAGAGTTTTTTTTTTTTTTTTGCAAGTAGCTAGTGGATTGAATACATTGAAT
 
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rJMFF044I23-          AGATAGATGCATCTATACATTACCAAAGTCCAGACGTATAGTATAAGTCAAGACTTATAA
                      ____________________________________________________________
consensus             AGATAGATGCATCTATACATTACCAAAGTCCAGACGTATAGTATAAGTCAAGACTTATAA
 
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rJMFF044I23-          TTAATTTGCTGCAAATTAAAATCAACAAGAAATTGAAATTTCTACGCTCCCATGGCCATG
JMFF044I23+                  GCTGCAAATTAAAATCAACAAGAAATTGAAATTTCTACGCTCCCATGGCCATG
JMFN011B04+                                                      ACGCTCCCATGGCCATG
                      ____________________________________________________________
consensus             TTAATTTGCTGCAAATTAAAATCAACAAGAAATTGAAATTTCTACGCTCCCATGGCCATG
 
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rJMFF044I23-          AAATTATCAGAACATCTCATCATGACCACAAAATGAATCACAGAAAAACCTAAAAGATCA
JMFF044I23+           AAATTATCAGAACATCTCATCATGACAACAAAATGAATCACAGAAAAACCTAAAAGATCA
JMFN011B04+           AAATTATCAGAACATCTCATCATGACAACAAAATGAATCACAGAAAAACCTAAAAGATCA
                      ____________________________________________________________
consensus             AAATTATCAGAACATCTCATCATGACAACAAAATGAATCACAGAAAAACCTAAAAGATCA
 
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rJMFF044I23-          GAGGCTAAGAGCTTAGTTACACAGGTAGGACAAAACTAAAAGACTTAAGTCTAATAAAAA
JMFF044I23+           GAGGCTAAGAGCTTAGTTACACAGGTAGGACAAAACTAAAAGACTTAAGTCTAATAAAAA
JMFN011B04+           GAGGCTAAGAGCTTAGTTACACAGGTAGGACAAAACTAAAAGACTTAAGTCTAATAAAAA
                      ____________________________________________________________
consensus             GAGGCTAAGAGCTTAGTTACACAGGTAGGACAAAACTAAAAGACTTAAGTCTAATAAAAA
 
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rJMFF044I23-          GGCACAGTAAAAGCAATGAAGAACAGAGCGGCGGCGGCGACCGCCGTCATGGCCGTGGGT
JMFF044I23+           GGCACAGTAAAAGCAATGAAGAACAGAGCGGCGGCGGCGACCGCCGTCATGGCCGTGGGT
JMFN011B04+           GGCGCAGTAAAAGCAATGAAGAACAGAGCGGCGGCGGCGACCGCCGTCATGGCCGTGGGT
                      ____________________________________________________________
consensus             GGCACAGTAAAAGCAATGAAGAACAGAGCGGCGGCGGCGACCGCCGTCATGGCCGTGGGT
 
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rJMFF044I23-          GCTCGGAGAGTTCTTGAAGACGACGACCATTGATCTCCGTGGGGAGGCTTTCGGAAGTAG
JMFF044I23+           GCTCGGAGAGTTCTTGAAGACGACGACGATTGATCTCCGTGGGGAGGCTTTCGGAAGTAG
JMFN011B04+           GCTCGGAGAGTTCTTGAAGACGACGACGATTGATCTCCGTGGGGAGGCTTTCGGAAGTAG
                      ____________________________________________________________
consensus             GCTCGGAGAGTTCTTGAAGACGACGACGATTGATCTCCGTGGGGAGGCTTTCGGAAGTAG
 
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rJMFF044I23-          TACGGGAACCACGGGAGGATGGGGTCCGGAGGCGGCGGCGTGAGGCCGCCGTTGGTGAAA
JMFF044I23+           TACGGGAACCACGGGAGGATGGGGTCCGGAGGCGGCGGCGTGAGGCCGCCGTTGGTGAAA
JMFN011B04+           TACGGGAACCACGGGAGGATGGGGTCCGGAGGCGGCGGCGTGAGGCCGCCGTTGGTGAAA
                      ____________________________________________________________
consensus             TACGGGAACCACGGGAGGATGGGGTCCGGAGGCGGCGGCGTGAGGCCGCCGTTGGTGAAA
 
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rJMFF044I23-          TCCGGCGGTGGGTTGTAGAAGTAGACGCCGCCGCCGCCGCCGCCGGGGGGAGTGTAAGTA
JMFF044I23+           TCCGGCGGTGGGTTGTAGAAGTAGACGCCGCCGCCGCCGCCGCCGGGGGGAGTGTAAGTA
JMFN011B04+           TCCGGCGGTGGGTTGTAGAAGTAGACGCCGCCGCCGCCGCCGCCGGGGGGAGTGTAAGTA
                      ____________________________________________________________
consensus             TCCGGCGGTGGGTTGTAGAAGTAGACGCCGCCGCCGCCGCCGCCGGGGGGAGTGTAAGTA
 
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rJMFF044I23-          GGGAGTGGGGGAGGATTGTTAGAGCCTGGTTGGGAGGGTGGAGTTGTAGTCGCCGGAGGG
JMFF044I23+           GGGAGTGGGGGAGGATTGTTAGAGCCTGGTTGGGAGGGTGGAGTNGTAGTCGCCGGAGGG
JMFN011B04+           GGGAGTGGGGGAGGATTGTTAGAGCCTGGTTGGGAGGGTGGAGTTGTAGTCGCCGGAGGG
                      ____________________________________________________________
consensus             GGGAGTGGGGGAGGATTGTTAGAGCCTGGTTGGGAGGGTGGAGTTGTAGTCGCCGGAGGG
 
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rJMFF044I23-          TTGTTGTTTCCGGGGCCGGT                                        
JMFF044I23+           TTGTTGTTTCCGGGGCCGGTTGGCGGTGGGTAGCACGGATAGGGGCACTCTTGGGCGGTG
JMFN011B04+           TTGTTGTTTCCGGGGCCGGTTGGCGGTGGGTAGCACGGATAGGGGCACTCTTGGGCGGTG
                      ____________________________________________________________
consensus             TTGTTGTTTCCGGGGCCGGTTGGCGGTGGGTAGCACGGATAGGGGCACTCTTGGGCGGTG
 
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JMFF044I23+           GTGGTGGTCGCCGGAAAAGTGAGGGCGGCGGCGAGAAGGAGGATGGCTTGGAAGAAAAGC
JMFN011B04+           GTGGTGGTCGCCGGAAAAGTGAGGGCGGCGGCGAGAAGGAGGATGGCTTGGAAGAAAAGC
                      ____________________________________________________________
consensus             GTGGTGGTCGCCGGAAAAGTGAGGGCGGCGGCGAGAAGGAGGATGGCTTGGAAGAAAAGC
 
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JMFF044I23+           TTGGAGGCCATGGGATGAGGAGTGAGGAGGAATAGTGGCATTTACAAAGTAT        
JMFN011B04+           TTGGAGGCCATGGGATGAGGAGTGAGGAGGAATAGTGGCATTTACAAAGTATGAGAGAAA
                      ____________________________________________________________
consensus             TTGGAGGCCATGGGATGAGGAGTGAGGAGGAATAGTGGCATTTACAAAGTATGAGAGAAA