Contig 013017:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009N12Sequence420013017 (2)ref|XP_003635211.1|2e-45PREDICTED: beta-galactosidase 6 [Vitis vinifera] emb|CBI18606.3| unnamed protein
JMSF041B01Sequence777012123 (2)ref|XP_009789912.1|268PREDICTED: beta-galactosidase 6-like isoform X2 [Nicotiana sylvestris]802013017 (2)emb|CDO99618.1|1e-108unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF041B01+                                                                    GT
                      ____________________________________________________________
consensus                                                                       GT
 
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rJMSF041B01+          AGGCCTTGAAGGTGAACCACATTGGACTCGACAAAACTGCTCTTGCAAACAGTTCATTGT
                      ____________________________________________________________
consensus             AGGCCTTGAAGGTGAACCACATTGGACTCGACAAAACTGCTCTTGCAAACAGTTCATTGT
 
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rJMSF041B01+          GGATTCATGGAAAATTCTTTGCCAATAAACCAGAGCTTGACATGGTACAAGACGATGTTC
                      ____________________________________________________________
consensus             GGATTCATGGAAAATTCTTTGCCAATAAACCAGAGCTTGACATGGTACAAGACGATGTTC
 
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rJMSF041B01+          CTGGCTCCTGAGGGAAGCGGCCCGGTATCAATATACCTTGGCAGCATGGGGAAAGGTCAG
                      ____________________________________________________________
consensus             CTGGCTCCTGAGGGAAGCGGCCCGGTATCAATATACCTTGGCAGCATGGGGAAAGGTCAG
 
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rJMSF041B01+          GCATGGATTAATGGACAGAGCATAGGGAGATATTGGTCTGCCTATCATTCCTCATCAACA
                      ____________________________________________________________
consensus             GCATGGATTAATGGACAGAGCATAGGGAGATATTGGTCTGCCTATCATTCCTCATCAACA
 
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rJMSF041B01+          GGCTGTTCCAAAAAATGCGACTATCGGGGAACATATGATCCATTCAAATGTCTAAAGAAA
                      ____________________________________________________________
consensus             GGCTGTTCCAAAAAATGCGACTATCGGGGAACATATGATCCATTCAAATGTCTAAAGAAA
 
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rJMSF041B01+          TGTGGCCAACCTGCCCAAGTTTTGTATCACATACCTCGCAGCTGGTTACACCCGGGCGAA
                      ____________________________________________________________
consensus             TGTGGCCAACCTGCCCAAGTTTTGTATCACATACCTCGCAGCTGGTTACACCCGGGCGAA
 
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rJMSF041B01+          AATCTGCTTGTTCTTCATGAAGAGTTTGGGGGAGACCCTTCGAAGATTTCCCTGGCGACG
                      ____________________________________________________________
consensus             AATCTGCTTGTTCTTCATGAAGAGTTTGGGGGAGACCCTTCGAAGATTTCCCTGGCGACG
 
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rJMSF041B01+          CGAAATGGGGAAGAGATATGTGCGCACATATCACAGGCTGATCCTCCACCTGTAGGCTCC
JMFN009N12-           CGAAATGGGGAAGAGATATGTGCACACATATCACAGGCTGATCCTCCACCTGTAGGCTCC
                      ____________________________________________________________
consensus             CGAAATGGGGAAGAGATATGTGCGCACATATCACAGGCTGATCCTCCACCTGTAGGCTCC
 
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rJMSF041B01+          TGGAAGATGAACCAAGCTTTTGAATCTCAACACCCTGAGCTTCAGCTGAGCTGTGAAGGA
JMFN009N12-           TGGAAGATGAACCAAGCTTTTGAATCTCAACACCCTGAGCTTCAGCTGAGCTGTGAAGGA
                      ____________________________________________________________
consensus             TGGAAGATGAACCAAGCTTTTGAATCTCAACACCCTGAGCTTCAGCTGAGCTGTGAAGGA
 
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rJMSF041B01+          GGATGGAAGATCGGATCCATTCGTTTCGCGAGCTTTGGAACTCCGAGAGGAGAATGTGGA
JMFN009N12-           GGATGGAAGATCGGATCCATTCGTTTCGCGAGCTTTGGAACTCCGAGAGGAGAATGTGGA
                      ____________________________________________________________
consensus             GGATGGAAGATCGGATCCATTCGTTTCGCGAGCTTTGGAACTCCGAGAGGAGAATGTGGA
 
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rJMSF041B01+          ACACTCTCTCCAGGGAACTGCCATTCTAATGTCACATCAATCCTTCAGCAGGTCTGTGTA
JMFN009N12-           ACACTCTCTCCAGGGAACTGCCATTCTAATGTCACATCAATCCTTCAGCAGGTCTGTGTA
                      ____________________________________________________________
consensus             ACACTCTCTCCAGGGAACTGCCATTCTAATGTCACATCAATCCTTCAGCAGGTCTGTGTA
 
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rJMSF041B01+          GGGAAAACACAATGTTCAATTACAGTCACTGCAGCTAATCTTGGAGACCCTTGTCCTGGA
JMFN009N12-           GGGAAAACACAATGTTCAATTACAGTCACTGCAGCTAATCTTGGAGACCCTTGTCCTGGA
                      ____________________________________________________________
consensus             GGGAAAACACAATGTTCAATTACAGTCACTGCAGCTAATCTTGGAGACCCTTGTCCTGGA
 
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rJMSF041B01+          GTCATCAAGAGCTTAGCAGTTGAAGCCATTTGCAGTGCTTGAGCCACCATCTTCCATGGA
JMFN009N12-           GTCATCAAGAGCTTAGCAGTTGAAGCCATTTGCAGTGCTTGAGCCACCATCTTCCATGGA
                      ____________________________________________________________
consensus             GTCATCAAGAGCTTAGCAGTTGAAGCCATTTGCAGTGCTTGAGCCACCATCTTCCATGGA
 
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rJMSF041B01+          TTATCTCCTCTTCTTGTCTT                                        
JMFN009N12-           TTATCTCCTCTTCTTGTCTTTAAACTTCACATGATTGAATAAAGATGCAATCTTTCTAAA
                      ____________________________________________________________
consensus             TTATCTCCTCTTCTTGTCTTTAAACTTCACATGATTGAATAAAGATGCAATCTTTCTAAA