Contig 013016:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009M17Sequence621013016 (2)ref|XP_006415664.1|6e-05hypothetical protein EUTSA_v10009434mg [Eutrema salsugineum] gb|ESQ34017.1| hypo
JMFN016L19Sequence559013016 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN009M17- CGAGACTTAACCATTCTATTT
                      ____________________________________________________________
consensus CGAGACTTAACCATTCTATTT
 
. : . : . : . : . : . :
JMFN009M17- CCATGATGCCAAGCCAAAAAGCGGGACAGTTGAGTCACACATTATGCATGACCACCTTCG
                      ____________________________________________________________
consensus CCATGATGCCAAGCCAAAAAGCGGGACAGTTGAGTCACACATTATGCATGACCACCTTCG
 
. : . : . : . : . : . :
JMFN009M17- TCATAGCGACAATGATGGTTGTGGCCATTGCAACACAATATCAATCACCAGAGATACAAC
                      ____________________________________________________________
consensus TCATAGCGACAATGATGGTTGTGGCCATTGCAACACAATATCAATCACCAGAGATACAAC
 
. : . : . : . : . : . :
JMFN009M17- CACAAGTCTTATTACCATCTTCGCGGAGAACCAAAACCTTCTACCAGCACAGAGAACAAT
                      ____________________________________________________________
consensus CACAAGTCTTATTACCATCTTCGCGGAGAACCAAAACCTTCTACCAGCACAGAGAACAAT
 
. : . : . : . : . : . :
JMFN016L19+ TACCTGCCAGGAAAATGTTTGAAGACT
JMFN009M17- GGAAAGATAGAGATGAGTCGAGAGATGGGGAGTTACCTGCCAGGAAAATGTTTGAAGACT
                      ____________________________________________________________
consensus GGAAAGATAGAGATGAGTCGAGAGATGGGGAGTTACCTGCCAGGAAAATGTTTGAAGACT
 
. : . : . : . : . : . :
JMFN016L19+ ACGGGACGTGGGATCCTGCGCCATACTTTGGTGGCGGCAGCTATCCAGCTCCAATTCCTC
JMFN009M17- ACGGGACGTGGGATCCTGCGCCATACTTTGGTGGCGGCAGCTATCCAGCTCCAATTCCTC
                      ____________________________________________________________
consensus ACGGGACGTGGGATCCTGCGCCATACTTTGGTGGCGGCAGCTATCCAGCTCCAATTCCTC
 
. : . : . : . : . : . :
JMFN016L19+ ATAGGCATGTGAAGGTAAAATGATGTAGAGCCAGGGGGGAACAAGTTAAGAGGATTCAAG
JMFN009M17- ATAGGCATGTGAAGGTAAAATGATGTAGAGCCAGGGGGGAACAAGTTAAGAGGATTCAAG
                      ____________________________________________________________
consensus ATAGGCATGTGAAGGTAAAATGATGTAGAGCCAGGGGGGAACAAGTTAAGAGGATTCAAG
 
. : . : . : . : . : . :
JMFN016L19+ AGCAAACTGA
JMFN009M17- AGCAAACTGAAGTGGAGAAGATATATTAGATATATTGCTGCAGAATAGTATTTTCAATAA
                      ____________________________________________________________
consensus AGCAAACTGAAGTGGAGAAGATATATTAGATATATTGCTGCAGAATAGTATTTTCAATAA
 
. : . : . : . : . : . :
JMFN009M17- TGGAAATGTTCTCCTATTTCCCCCAGTATCATTTTTACCTGATTTGAATACTCAAACACT
                      ____________________________________________________________
consensus TGGAAATGTTCTCCTATTTCCCCCAGTATCATTTTTACCTGATTTGAATACTCAAACACT
 
. : . : . : . : . : . :
JMFN009M17- TTTCGAGTGTTGGGTTATGCAATCCAGATAACCAAAGTTCTATGCTATGAATGTAAAAGT
                      ____________________________________________________________
consensus TTTCGAGTGTTGGGTTATGCAATCCAGATAACCAAAGTTCTATGCTATGAATGTAAAAGT
 
. : . : . : . : . : . :
JMFN009M17- AAAGGGCAATAACATACTGCTAGAGAACTAGAACCATGTAATAAATATTTGTCACAAATC
                      ____________________________________________________________
consensus AAAGGGCAATAACATACTGCTAGAGAACTAGAACCATGTAATAAATATTTGTCACAAATC