Contig 013015:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN038L21+                                                                      A
                      ____________________________________________________________
consensus                                                                        A
 
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JMFN038L21+           AGCAGATCAGATGTGCATTAATATAATGTGAGCTGAGAAATTACATGTACATAGACTCAT
                      ____________________________________________________________
consensus             AGCAGATCAGATGTGCATTAATATAATGTGAGCTGAGAAATTACATGTACATAGACTCAT
 
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JMFN038L21+           AATGAATATATATGTTGCATAAATACATGTATGCCTTTGTCATGCATGCATGCATGGTTA
                      ____________________________________________________________
consensus             AATGAATATATATGTTGCATAAATACATGTATGCCTTTGTCATGCATGCATGCATGGTTA
 
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JMFN038L21+           TCATCACTACTTCCAACGCTTGAAGCTGCGCTTTCCATACTTCCCTTGCTTGATCTTTCC
                      ____________________________________________________________
consensus             TCATCACTACTTCCAACGCTTGAAGCTGCGCTTTCCATACTTCCCTTGCTTGATCTTTCC
 
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JMFN038L21+           ATGCTTGAATTTTCCATGGTGCCCATAGTAACCACCATGCATATGATGATGACCATGTGC
                      ____________________________________________________________
consensus             ATGCTTGAATTTTCCATGGTGCCCATAGTAACCACCATGCATATGATGATGACCATGTGC
 
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JMFN038L21+           AAGATGGTGAGCTCCAATTGCAGCAGCTGCAGCTGCAGCACCTCCAGCTAACATTGTTCC
JMFN008B03+                  TGAGCTCCAATTGCAGCAGCTGCAGCTGCAGCACCTCCAGCTAACATTGTTCC
                      ____________________________________________________________
consensus             AAGATGGTGAGCTCCAATTGCAGCAGCTGCAGCTGCAGCACCTCCAGCTAACATTGTTCC
 
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JMFN038L21+           AAAGTTATTAGATCCTTGCCCCGCACCATGATGTGAAGTTGATGGGGGTGGATAGCCAGC
JMFN008B03+           AAAGTTATTAGATCCTTGCCCCGCACCATGATGTGAAGTTGATGGGGGTGGATAGCCAGC
JMFN009M01+           AAAGTTATTAGATCCTTGCNCCGCACCATGATGTGAAGTTGATGAGGGTGGATAGCCAGC
                      ____________________________________________________________
consensus             AAAGTTATTAGATCCTTGCCCCGCACCATGATGTGAAGTTGATGGGGGTGGATAGCCAGC
 
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JMFN038L21+           AGGAGGATAGCCATGTTGGGGAAATGCACCACTCGGCGGAGGATATACCGCCGGCGCCGG
JMFN008B03+           AGGAGGATAGCCATGTTGGGGAAATGCACCACTCGGCGGAGGATATACCGCCGGCGCCGG
JMFN009M01+           AGGAGGATAGCCATGTTGGGGAAATGCACCACTCGGCGGAGGATATACCGCCGGCGCCGG
                      ____________________________________________________________
consensus             AGGAGGATAGCCATGTTGGGGAAATGCACCACTCGGCGGAGGATATACCGCCGGCGCCGG
 
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JMFN038L21+           CGCCGGGTAGCCAGCCGGAGGGGGAGGGTGTGCACCGGCAGGAGGATACCCTTCCGGGCT
JMFN008B03+           CGCCGGGTAGCCAGCCGGAGGGGGAGGGTGTGCACCGGCAGGAGGATACCCTTCCGGGCT
JMFN037F14+                           GGAGGGGGAGGGTGTGCACCGGCAGGAGGATACCCTTCCGGGCT
JMFN009M01+           CGCCGGGTAGCCAGCCGGAGGGGGAGGGTGTGCACCGGCAGTAGGATACCCTTCCGGGCT
                      ____________________________________________________________
consensus             CGCCGGGTAGCCAGCCGGAGGGGGAGGGTGTGCACCGGCAGGAGGATACCCTTCCGGGCT
 
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JMFN038L21+           GTATCCAGGTGAAGGAGGGGGAGGGTGTGCACCGGCAAGAGGAGGATACC          
JMFN008B03+           GTATCCAGGTGAAGGAGGGGGAGGGTGTGCACCAGCAAGAGGAGGATACCCTTCCGGCGG
JMFN037F14+           GTATCCAGGTGAAGGAGGGGGAGGGTGTGCACCGGCAAGAGGAGGATACCCTTCCGGCGG
JMFN009M01+           GTATCCAGGTGAAGGAGGGGGAGGGTGTGCACCGGCAAGAGCAGGATACCCTTCCGGCGG
                      ____________________________________________________________
consensus             GTATCCAGGTGAAGGAGGGGGAGGGTGTGCACCGGCAAGAGGAGGATACCCTTCCGGCGG
 
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JMFN008B03+           CATGTATCCAGGTGAAGGAGGAGGAGGATGGGGATATCCGGCAGGTGATGGGTATGCCCC
JMFN037F14+           CAGGTATCCAGGTGAAGGAGGAGGAGGATGGGGATATCCGGCAGGTGATGGGTATGCCCC
JMFN009M01+           CATGTATCCAGGTGAAGGAGGAGGAGGATGGGGATATCCGGCAGGTGATGGGTATGCCCC
                      ____________________________________________________________
consensus             CATGTATCCAGGTGAAGGAGGAGGAGGATGGGGATATCCGGCAGGTGATGGGTATGCCCC
 
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JMFN008B03+           TGCAGCAGGAGGAGGAGGATGAGGATATCCGGCAGCTGGTGGGTATGCCCCAGCAGGAGG
JMFN037F14+           TGCAGCAGGAGGAGGAGGATGAGGATATCCGGCAGCTGGTGGGTATGCCCCAGCAGGAGG
JMFN009M01+           TGCAGCAGGAGGAGGAGGATGAGGATATCCGGCAGCTGGTGGGTATGCCCCAGCAGGAGG
                      ____________________________________________________________
consensus             TGCAGCAGGAGGAGGAGGATGAGGATATCCGGCAGCTGGTGGGTATGCCCCAGCAGGAGG
 
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JMFN008B03+           AGAAGGATGAGGATATCCATGATGACCGCCGCCGTAGCCTCCCGGACGGTGATGACCGGC
JMFN037F14+           AAAAGGATGAGGATATCCATGATGGCCGCCGCCGTAGCCTCCCGGACGGTGATGACCGGC
JMFN009M01+           AGAAGGATGAGGATATCCATGATGACCGCCGCCGTAGCCTCCCGGACGGTGATGACCGGC
                      ____________________________________________________________
consensus             AGAAGGATGAGGATATCCATGATGACCGCCGCCGTAGCCTCCCGGACGGTGATGACCGGC
 
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JMFN008B03+           GCCGGCAAATCCGGCAAGGTTAGAAAGCAGCCCCCTTCCCTGGAACTCTGGCTTTCCCTT
JMFN037F14+           GCCGGCAAATCCGGCAAGGTTAGAAAGCAGCCCCCTTCCCTGGAACTCTGGCTTTCCCTT
JMFN009M01+           GCCGGCAAATCCGGCAAGGTTAGAAAGCAGCCCCCTTCCCTGGAACTCTGGCTTTCCCTT
                      ____________________________________________________________
consensus             GCCGGCAAATCCGGCAAGGTTAGAAAGCAGCCCCCTTCCCTGGAACTCTGGCTTTCCCTT
 
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JMFN008B03+           CCCCATTTTTATTCAGCTCCGGCGATAGATTACACACCTATAACTAGATAGATTCCTAGT
JMFN037F14+           CCCCATTTTTATTCAGCTCCGGCGATAGATTACACACCTATAACTAGATAGATTCCTAGT
JMFN009M01+           CCCCATTTTTATTCAGCTCCGGCGATAGATTACACACCTATAACTAGATAGATTCCTAGT
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consensus             CCCCATTTTTATTCAGCTCCGGCGATAGATTACACACCTATAACTAGATAGATTCCTAGT
 
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JMFN008B03+           TTAAGGAAAGGATAAAATCCTTCCTTGGTAGTGTAATCTAGAACCGAA            
JMFN037F14+           TTAAGGAAAGGATAAAATCCTTCCTTGGTAGTGTAATCTAGAACCGAA            
JMFN009M01+           TTAAGGAAAGGATAAAATCCTTCCTTGGTAGTGTAATCTAGAACCGAAGATTATGAAGGG
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consensus             TTAAGGAAAGGATAAAATCCTTCCTTGGTAGTGTAATCTAGAACCGAAGATTATGAAGGG