| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN003L15 | Sequence | 620 | 013007 (10) | gb|EYU46011.1| | 2e-37 | hypothetical protein MIMGU_mgv1a016321mg [Erythranthe guttata] | |||||
| JMFN010B22 | Sequence | 626 | 013007 (10) | gb|EYU46011.1| | 3e-37 | hypothetical protein MIMGU_mgv1a016321mg [Erythranthe guttata] | |||||
| JMFN029L21 | Sequence | 589 | 013007 (10) | gb|EYU46011.1| | 2e-37 | hypothetical protein MIMGU_mgv1a016321mg [Erythranthe guttata] | |||||
| JMFN032I02 | Sequence | 613 | 013007 (10) | gb|EYU46011.1| | 2e-37 | hypothetical protein MIMGU_mgv1a016321mg [Erythranthe guttata] | |||||
| JMFN033A11 | Sequence | 484 | 013007 (10) | ref|XP_009772886.1| | 3e-26 | PREDICTED: 40S ribosomal protein S26-3-like [Nicotiana sylvestris] | |||||
| JMFN039A19 | Sequence | 606 | 013007 (10) | gb|EYU46011.1| | 2e-37 | hypothetical protein MIMGU_mgv1a016321mg [Erythranthe guttata] | |||||
| JMSF001K08 | Sequence | 345 | 013007 (10) | gb|EYU46011.1| | 1e-44 | hypothetical protein MIMGU_mgv1a016321mg [Erythranthe guttata] | 587 | 013007 (10) | gb|EYU46011.1| | 2e-37 | hypothetical protein MIMGU_mgv1a016321mg [Erythranthe guttata] |
| JMSF009M03 | Sequence | 349 | 013007 (10) | gb|EYU46011.1| | 4e-45 | hypothetical protein MIMGU_mgv1a016321mg [Erythranthe guttata] | 146 | 013007 (10) | ref|XP_009615153.1| | 5e-20 | PREDICTED: 40S ribosomal protein S26-3-like [Nicotiana tomentosiformis] ref|XP_0 |
This contig is upended
. : . : . : . : . : . :
JMFN033A11+ TCAAAAATAATATTTCATAG
JMFN032I02+ AAGGTTCTCAAAAATAATATTTCATAG
JMFN039A19+ CAAAAATAATATTTCATAG
JMFN010B22+ TCAAAAATAATATTTCATAG
JMFN003L15+ TCAAAAATAATATTTCATAG
____________________________________________________________
consensus AAGGTTCTCAAAAATAATATTTCATAG
. : . : . : . : . : . :
rJMSF001K08- AATAGAACAATTTGATAATTAGTCTGAACTGA
JMFN033A11+ AACAAGAATCTCTTTGTTTTCCATACTAAATAGAACAATTTGATAATTAGTCTGAACTGA
JMFN032I02+ AACAAGAATCTCTTTGTTTTCCATACTAAATAGAACAATTTGATAATTAGTCTGAACTGA
JMFN039A19+ AACAAGAATCTCT-TGTTTTCCATACTAAATAGAACAATTTGATAATTAGTCTGAACTGA
JMFN029L21+ TTGTTTTCCATACTAAATAGAACAATTGNATAATTAGTCTGAACTGA
JMFN010B22+ AACAAGAATCTCTNTGTTTTCCATACTAAATAGAACAATTTGATAATTAGTCTGAACTGA
JMFN003L15+ AACAAGAATCTCTNTGTTTTCCATACTAAATAGAACAATNTGATAATTAGTCTGAACTGA
____________________________________________________________
consensus AACAAGAATCTCTTTGTTTTCCATACTAAATAGAACAATTTGATAATTAGTCTGAACTGA
. : . : . : . : . : . :
rJMSF001K08- AACAGAACATAATGAAAAAAACTAGCAGCATCTATAACTTGCATAACCTTAAAGGAATGC
JMFN033A11+ AACAGAACATAATGAAAAAAACTAGCAGCATCTATAACTTGCATAACCTTAAAGGAATGC
JMFN032I02+ AACAGAACATAATGAAAAAAACTAGCAGCATCTATAACTTGCATAACCTTAAAGGAATGC
JMFN039A19+ AACAGAACATAATGAAAAAAACTAGCAGCATCTATAACTTGCATAACCTTAAAGGAATGC
JMFN029L21+ AACAGAACATAATGAAAAAAACTAGCAGCATCTATAACTTGCATAACCTTAAAGGAATGC
JMFN010B22+ AACAGAACATAATGAAAAAAACTAGCAGCATCTATAACTTGCATAACCTTAAAGGAATGC
JMFN003L15+ AACAGAACATAATGAAAAAAACTAGCAGCATCTATAACTTGCATAACCTTAAAGGAATGC
____________________________________________________________
consensus AACAGAACATAATGAAAAAAACTAGCAGCATCTATAACTTGCATAACCTTAAAGGAATGC
. : . : . : . : . : . :
rJMSF001K08- CAAAAACTCTCATAATAAGGCAAATCAATCAGTGAGCATCC-TCTAAGTTCTGGGAGCCG
JMFN033A11+ CAAAAACTCTCATAATAAGGCAAATCAATCAGTGAGCATCCTTCTAAGTTCTGGGAGCCG
JMFN032I02+ CAAAAACTCTCATAATAAGGCAAATCAATCAGTGAGCATCCTTCTAAGTTCTGGGAGCCG
JMFN039A19+ CAAAAACTCTCATAATAAGGCAAATCAATCAGTGAGCATCCTTCTAAGTTCTGGGAGCCG
JMFN029L21+ CAAAAACTCTCATAATAAGGCAAATCAATCAGTGAGCATCCTTCTAAGTTCTGGGAGCCG
JMFN010B22+ CAAAAACTCTCATAATAAGGCAAATCAATCAGTGAGCATCCTTCTAAGTTCTGGGAGCCG
JMFN003L15+ CAAAAACTCTCATAATAAGGCAAATCAATCAGTGAGCATCCTTCTAAGTTCTGGGAGCCG
____________________________________________________________
consensus CAAAAACTCTCATAATAAGGCAAATCAATCAGTGAGCATCCTTCTAAGTTCTGGGAGCCG
. : . : . : . : . : . :
rJMSF001K08- TTGGAGCTCCAGCGGGCCTTGGAGCTTGACCAGGCTTTGGCTGATCATCCCTAGGGCGTC
JMFN033A11+ TTGGAGCTCCAGCGGGCCTTGGAGCTTGACCAGGCTTTGGCTGATCATCCCTAGGGCGTC
JMFN032I02+ TTGGAGCTCCAGCGGGCCTTGGAGCTTGACCAGGCTTTGGCTGATCATCCCTAGGGCGTC
JMFN039A19+ TTGGAGCTCCAGCGGGCCTTGGAGCTTGACCAGGCTTTGGCTGATCATCCCTAGGGCGTC
JMFN029L21+ TTGGAGCTCCAGCGGGCCTTGGAGCTTGACCAGGCTTTGGCTGATCATCCCTAGGGCGTC
JMFN010B22+ TTGGAGCTCCAGCGGGCCTTGGAGCTTGACCAGGCTTTGGCTGATCATCCCTAGGGCGTC
JMFN003L15+ TTGGAGCTCCAGCGGGCCTTGGAGCTTGACCAGGCTTTGGCTGATCATCCCTAGGGCGTC
____________________________________________________________
consensus TTGGAGCTCCAGCGGGCCTTGGAGCTTGACCAGGCTTTGGCTGATCATCCCTAGGGCGTC
. : . : . : . : . : . :
rJMSF001K08- TGAAGCGTTGTGGAGCTTCACGGATCCTTCTATCGGTACGAGAGCGGACCCTGACAACCT
JMFN033A11+ TGAAGCGTTGTGGAGCTTCACGGATCCTTCTATCGGTACGAGAGCGGACCCTGACAACCT
JMFN032I02+ TGAAGCGTTGTGGAGCTTCACGGATCCTTCTATCGGTACGAGAGCGGACCCTGACAACCT
JMFN039A19+ TGAAGCGTTGTGGAGCTTCACGGATCCTTCTATCGGTACGAGAGCGGACCCTGACAACCT
JMSF009M03+ TCTATCGGTACGAGAGCGGACCCTGACAACCT
JMSF001K08+ ATCGGTACGAGAGCGGACCCTGACAACCT
JMFN029L21+ TGAAGCGTTGTGGAGCTTCACGGATCCTTCTATCGGTACGAGAGCGGACCCTGACAACCT
JMFN010B22+ TGAAGCGTTGTGGAGCTTCACGGATCCTTCTATCGGTACGAGAGCGGACCCTGACAACCT
JMFN003L15+ TGAAGCGTTGTGGAGCTTCACGGATCCTTCTATCGGTACGAGAGCGGACCCTGACAACCT
____________________________________________________________
consensus TGAAGCGTTGTGGAGCTTCACGGATCCTTCTATCGGTACGAGAGCGGACCCTGACAACCT
. : . : . : . : . : . :
rJMSF001K08- TGGAATGAATTGCGCAGGAAACACAGTACTGCATCTTCAAGTAGAGCTTGGGAAGTGTGT
JMFN033A11+ TGGAATGAATTGCGCAGGAAACACAGTACTGCATCTTCAAGTAGAGCTTGGGAAGTGTGT
JMFN032I02+ TGGAATGAATTGCGCAGGAAACACAGTACTGCATCTTCAAGTAGAGCTTGGGAAGTGTGT
JMFN039A19+ TGGAATGAATTGCGCAGGAAACACAGTACTGCATCTTCAAGTAGAGCTTGGGAAGTGTGT
JMSF009M03+ TGGAATGAATTGCGCAGGAAACACAGTACTGCATCTTCAAGTAGAGCTTGGGAAGTGTGT
JMSF001K08+ TGGAATGAATTGCGCAGGAAACACAGTACTGCATCTTCAAGTAGAGCTTGGGAAGTGTGT
rJMSF009M03- GTACTGCATCTTCAANTACAGCTTGNGAAGTGTGT
JMFN029L21+ TGGAATGAATTGCGCAGGAAACACAGTACTGCATCTTCAAGTAGAGCTTGGGAAGTGTGT
JMFN010B22+ TGGAATGAATTGCGCAGGAAACACAGTACTGCATCTTCAAGTAGAGCTTGGGAAGTGTGT
JMFN003L15+ TGGAATGAATTGCGCAGGAAACACAGTACTGCATCTTCAAGTAGAGCTTGGGAAGTGTGT
____________________________________________________________
consensus TGGAATGAATTGCGCAGGAAACACAGTACTGCATCTTCAAGTAGAGCTTGGGAAGTGTGT
. : . : . : . : . : . :
rJMSF001K08- AACTTTCAAAAGCACAAGCCTCTTGGACATCCCTAACTGCTGCTTGTTCAACAATGTTCC
JMFN033A11+ AACTTTCAAAAGCATAAGCCTCTTGGACATCCCTAACTGCTGCTTGTTCAACAATGTTCC
JMFN032I02+ AACTTTCAAAAGCACAAGCCTCTTGGACATCCCTAACTGCTGCTTGTTCAACAATGTTCC
JMFN039A19+ AACTTTCAAAAGCACAAGCCTCTTGGACATCCCTAACTGCTGCTTGTTCAACAATGTTCC
JMSF009M03+ AACTTTCAAAAGCACAAGCCTCTTGGACATCCCTAACTGCTGCTTGTTCAACAATGTTCC
JMSF001K08+ AACTTTCAAAAGCACAAGCCTCTTGGACATCCCTAACTGCTGCTTGTTCAACAATGTTCC
rJMSF009M03- AACTTTCANAAGCACNANCCTCTTGGACATCCCTAACTGCTGCTTGTTCAACAATGTTCC
JMFN029L21+ AACTTTCAAAAGCACAAGCCTCTTGGACATCCCTAACTGCTGCTTGTTCAACAATGTTCC
JMFN010B22+ AACTTTCAAAAGCACAAGCCTCTTGGACATCCCTAACTGCTGCTTGTTCAACAATGTTCC
JMFN003L15+ AACTTTCAAAAGCACAAGCCTCTTGGACATCCCTAACTGCTGCTTGTTCAACAATGTTCC
____________________________________________________________
consensus AACTTTCAAAAGCACAAGCCTCTTGGACATCCCTAACTGCTGCTTGTTCAACAATGTTCC
. : . : . : . : . : . :
rJMSF001K08- TAACAAGGAATCTCTTAATGGCCTTATCCTTTGGGCAGCATTTACCGCAGTTGGAGCAGC
JMFN033A11+ TAACAAGGAATCTCTTAATGGCCTTATCCTTTGGGCAG
JMFN032I02+ TAACAAGGAATCTCTTAATGGCCTTATCCTTTGGGCAGCATTTACCGCAGTTGGAGCAGC
JMFN039A19+ TAACAAGGAATCTCTTAATGGCCTTATCCTTTGGGCAGCATTTACCGCAGTTGGAGCAGC
JMSF009M03+ TAACAAGGAATCTCTTAATGGCCTTATCCTTTGGGCAGCATTTACCGCAGTTGGAGCAGC
JMSF001K08+ TAACAAGGAATCTCTTAATGGCCTTATCCTTTGGGCAGCATTTACCGCAGTTGGAGCAGC
rJMSF009M03- TAACAAGGAATCTCTTAATGGCCTTATCCTTTGGGCAGCATTTACCGCAGT
JMFN029L21+ TAACAAGGAATCTCTTAATGGCCTTATCCTTTGGGCAGCATTTACCGCAGTTGGAGCAGC
JMFN010B22+ TAACAAGGAATCTCTTAATGGCCTTATCCTTTGGGCAGCATTTACCGCAGTTGGAGCAGC
JMFN003L15+ TAACAAGGAATCTCTTAATGGCCTTATCCTTTGGGCAGCATTTACCGCAGTTGGAGCAGC
____________________________________________________________
consensus TAACAAGGAATCTCTTAATGGCCTTATCCTTTGGGCAGCATTTACCGCAGTTGGAGCAGC
. : . : . : . : . : . :
rJMSF001K08- GGATGAAGTTAACGTGGCCACGGCCGTGCTTGTTGCGGCCACCATTCCTTCGCTTGAATG
JMFN032I02+ GGATGAAGTTAACGTGGCCACGGCCGTGCTTGTTGCGGCCACCATTCCTTCGCTTGAATG
JMFN039A19+ GGATGAAGTTAACGTGGCCACGGCCGTGCTTGTTGCGGCCACCATTCCTTCGCTTGAATG
JMSF009M03+ GGATGAAGTTAACGTGGCCACGGCCGTGCTTGTTGCGGCCACCATTCCTTCGCTTGAATG
JMSF001K08+ GGATGAAGTTAACGTGGCCACGGCCGTGCTTGTTGCGGCCACCATTCCTTCGCTTGAATG
JMFN029L21+ GGATGAAGTTAACGTGGCCACGGCCGTGCTTGTTGCGGCCACCATTCCTTCGCTTGAATG
JMFN010B22+ GAATGAAGTTAACGTGGCCACGGCCGTGCTTGTTGCGGCCACCATTCCTTCGCTTGAATG
JMFN003L15+ GGATGAAGTTAACGTGGCCACGGCCGTGCTTGTTGCGGCCACCATTCCTTCGCTTGAATG
____________________________________________________________
consensus GGATGAAGTTAACGTGGCCACGGCCGTGCTTGTTGCGGCCACCATTCCTTCGCTTGAATG
. : . : . : . : . : . :
rJMSF001K08- TCATTTTT
JMFN032I02+ TCATTTTTGCGGTGTAGACGAAGGCAGCCGGTACAGCTCGGAACTC
JMFN039A19+ TCATTTTTGCGGTGTAGACGAAGGCAGCCGGTACAGCTCGGAACTCCA
JMSF009M03+ TCATTTTT
JMSF001K08+ TCATTTTT
JMFN029L21+ TCATTTTTGCGGTGTAGACGAAGGCAGCCGGTACAGCTCGGAACTC
JMFN010B22+ TCATTTTTGCGGTGTAGACGAAGGCAGCCGGTACAGCTCGGAACTCCAATGGCTGAACTC
JMFN003L15+ TCATTTTTGCGGTGTAGACGAAGGCAGCCGGTACAGCTCGGAACTCCAATGGCTGAACTC
____________________________________________________________
consensus TCATTTTTGCGGTGTAGACGAAGGCAGCCGGTACAGCTCGGAACTCCAATGGCTGAACTC