Contig 013002:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040A13Sequence477013002 (6)
JMFF042G14Sequence650013002 (6)602013113 (3)gb|KDO44819.1|5e-63hypothetical protein CISIN_1g0100012mg [Citrus sinensis]
JMFF051M18Sequence598013002 (6)
JMFS014B11Sequence574013002 (6)emb|CDP16058.1|3e-05unnamed protein product [Coffea canephora]
JMFS048A10Sequence485013002 (6)ref|XP_009777198.1|7e-05PREDICTED: probable polyamine oxidase 2 isoform X1 [Nicotiana sylvestris]
JMSF004K06Sequence391013002 (6)509013113 (3)gb|KDO44819.1|3e-53hypothetical protein CISIN_1g0100012mg [Citrus sinensis]

Alignment

This contig is upended


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JMFS048A10+                                         GAGCTCGGGCAGTTGCAAGTCTTGCAAAGC
JMFS014B11+                        AAATGAAGCATCATANAGAGCTCGGGCAGCTGCAAGTCCTGCAAAGC
                      ____________________________________________________________
consensus                          AAATGAAGCATCATANAGAGCTCGGGCAGTTGCAAGTCTTGCAAAGC
 
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JMFS048A10+           CGGCATCGATAACTATTACGGATGGAGAAGACTCATGCCTCCTCCTAGCATCTGAATAGC
JMFS014B11+           CGGCACCGATAACAATGACGGATGGAGAAGACTCATGCCTCCTCTCAGCATCTGAATAGC
                      ____________________________________________________________
consensus             CGGCATCGATAACTATTACGGATGGAGAAGACTCATGCCTCCTCTTAGCATCTGAATAGC
 
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JMFS048A10+           AAACAGCCCTTTGGATCTGGCGATTGTTATTACTCTTGTCTCGTGATTCCATGGTTAATG
JMFS014B11+           AAACAGCTCTTTGGATCTGGCGATTGTTATTACTCTTGTCTCGTGATTCCATGGTTAATG
                      ____________________________________________________________
consensus             AAACAGCTCTTTGGATCTGGCGATTGTTATTACTCTTGTCTCGTGATTCCATGGTTAATG
 
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JMFS048A10+           AACGACTATGATCGGCAATCGAGACGACACGTATGGTTCGAATTAATTAAATTAAAATTA
JMFS014B11+           AACGACGATGATCGGCAATCGAGACGACACGTATGGTTCGAATTAATTAAATTAAAATTA
JMFF040A13+                    GATCGGCAATCGAGACGACACGTATGGTTCGAATTAATTAAATTAAAATTA
JMFF042G14+                    GATCGGCAATCGAGACGACACGTATGGTTCGAATTAATTAAATTAAAATTA
JMFF051M18+             CGACGATGATCGGCAATCGAGACGGGACGTATGGTTCGAATTAATTAAATTAAAATTA
                      ____________________________________________________________
consensus             AACGACGATGATCGGCAATCGAGACGACACGTATGGTTCGAATTAATTAAATTAAAATTA
 
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JMFS048A10+           ATGTTGATTAACGTCATCAATCTTAACAATCTGAGGATTATCTTATTGANGGCGAGGCCN
JMFS014B11+           ATGTTGAGAAACGACAGCAATCTTAACAATCTGAGGATTAACGAATTGATGGCGAGGCCT
JMFF040A13+           ATGTTGAGAAACGACAGCAATCTTAACAATCTGAGGATTAACGAATTGATGGCGAGGCCT
JMFF042G14+           ATGTTGAGAAACGACAGCAATCTTAACAATCTGAGGATTAACGAATTGATGGCGAGGCCT
JMFF051M18+           ATGTTGAGAAACGACAGCAATCTTAACAATCTGAGGATTAACGAATTGATGGCGAGGCCT
                      ____________________________________________________________
consensus             ATGTTGAGAAACGACAGCAATCTTAACAATCTGAGGATTAACGAATTGATGGCGAGGCCT
 
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JMFS048A10+           NNTGTCTGGGAATTAAAATTANTGAAGAATTGAGGGCAGAAATGGGGATTGGATCCTTCG
JMFS014B11+           TTTGTCTGGGAATTAAAATTATTGAAGAATTGAGGGCAGAAATGGGGAACGGATCTTTCG
JMFF040A13+           TTTGTCTGGGAATTAAAATTATTGAAGAATTGAGGGCAGAAATGGGGAACGGATCTTTCG
JMSF004K06+                                           AGGGCAGAAATGGGGAACGGATCTTTCG
JMFF042G14+           TTTGTCTGGGAATTAAAATTATTGAAGAATTGAGGGCAGAAATGGGGAACGGATCTTTCG
JMFF051M18+           TTTGTCTGGGAATTAAAATTATTGAAGAATGAGGGGCAGAAATGGGGAACGGATCTTTCG
                      ____________________________________________________________
consensus             TTTGTCTGGGAATTAAAATTATTGAAGAATTGAGGGCAGAAATGGGGAACGGATCTTTCG
 
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JMFS048A10+           TCGGAGTTAGAGAAACCTATCTTCACCTAACAGTTCATGCGTATTCTGTAACNACCGCTG
JMFS014B11+           TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
JMFF040A13+           TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
JMSF004K06+           TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
JMFF042G14+           TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
JMFF051M18+           TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
                      ____________________________________________________________
consensus             TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
 
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JMFS048A10+           CCCTTGAGGAAGACAATCGGGCGGA                                   
JMFS014B11+           CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
JMFF040A13+           CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
JMSF004K06+           CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
JMFF042G14+           CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
JMFF051M18+           CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
                      ____________________________________________________________
consensus             CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
 
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JMFS014B11+           ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
JMFF040A13+           ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
JMSF004K06+           ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
JMFF042G14+           ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
JMFF051M18+           ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
                      ____________________________________________________________
consensus             ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
 
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JMFS014B11+           GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCT             
JMFF040A13+           GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCTTGTTGTTTGGTGT
JMSF004K06+           GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCTTGTTGTTTGGTGT
JMFF042G14+           GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCTTGTTGTTTGGTGT
JMFF051M18+           GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCTTGTTGTTTGGTGT
                      ____________________________________________________________
consensus             GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCTTGTTGTTTGGTGT
 
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JMFF040A13+           GGGTTT                                                      
JMSF004K06+           GGGTTTGGGTTTTTGGTGCGAAGGGAGCGGTTGGATTTTATAGACTTGGGGGGCCTAGTC
JMFF042G14+           GGGTTTGGGTTTTTGGTGCGAAGGGAGCGGTTGGATTTTATAGACTTGGGGGGCCTAGTC
JMFF051M18+           GGGTTTGGGTTTTTGGTGCGAAGGGAGCGGTTGGATTTTATAGACTTGGGGGGCCTAGTC
                      ____________________________________________________________
consensus             GGGTTTGGGTTTTTGGTGCGAAGGGAGCGGTTGGATTTTATAGACTTGGGGGGCCTAGTC
 
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JMSF004K06+           ATTACCCCTAGGGAGAAGAATTTTCATATTGAATTCTAACTAGGAACAAATCACTAGGGA
JMFF042G14+           ATTACCCCTAGGGAGAAGAATTTTCATATTGAATTCTAACTAGGAACAAATCACTAGGGA
JMFF051M18+           ATTACCCCTAGGGAGAAGAATTTTCATATTGAATTCTAACTAGGAACAAATCACTAGGGA
                      ____________________________________________________________
consensus             ATTACCCCTAGGGAGAAGAATTTTCATATTGAATTCTAACTAGGAACAAATCACTAGGGA
 
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JMSF004K06+           CT                                                          
JMFF042G14+           CTAGGGAGAATTAAT                                             
JMFF051M18+           CTAGGGAGAATTAATGAGATTTGAACCCATGAAATAAACATTTTATAACATAAAATTTAT
                      ____________________________________________________________
consensus             CTAGGGAGAATTAATGAGATTTGAACCCATGAAATAAACATTTTATAACATAAAATTTAT