Contig 013002:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040A13Sequence477013002 (6)
JMFF042G14Sequence650013002 (6)602013113 (3)gb|KDO44819.1|5e-63hypothetical protein CISIN_1g0100012mg [Citrus sinensis]
JMFF051M18Sequence598013002 (6)
JMFS014B11Sequence574013002 (6)emb|CDP16058.1|3e-05unnamed protein product [Coffea canephora]
JMFS048A10Sequence485013002 (6)ref|XP_009777198.1|7e-05PREDICTED: probable polyamine oxidase 2 isoform X1 [Nicotiana sylvestris]
JMSF004K06Sequence391013002 (6)509013113 (3)gb|KDO44819.1|3e-53hypothetical protein CISIN_1g0100012mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS048A10+ GAGCTCGGGCAGTTGCAAGTCTTGCAAAGC
JMFS014B11+ AAATGAAGCATCATANAGAGCTCGGGCAGCTGCAAGTCCTGCAAAGC
                      ____________________________________________________________
consensus AAATGAAGCATCATANAGAGCTCGGGCAGTTGCAAGTCTTGCAAAGC
 
. : . : . : . : . : . :
JMFS048A10+ CGGCATCGATAACTATTACGGATGGAGAAGACTCATGCCTCCTCCTAGCATCTGAATAGC
JMFS014B11+ CGGCACCGATAACAATGACGGATGGAGAAGACTCATGCCTCCTCTCAGCATCTGAATAGC
                      ____________________________________________________________
consensus CGGCATCGATAACTATTACGGATGGAGAAGACTCATGCCTCCTCTTAGCATCTGAATAGC
 
. : . : . : . : . : . :
JMFS048A10+ AAACAGCCCTTTGGATCTGGCGATTGTTATTACTCTTGTCTCGTGATTCCATGGTTAATG
JMFS014B11+ AAACAGCTCTTTGGATCTGGCGATTGTTATTACTCTTGTCTCGTGATTCCATGGTTAATG
                      ____________________________________________________________
consensus AAACAGCTCTTTGGATCTGGCGATTGTTATTACTCTTGTCTCGTGATTCCATGGTTAATG
 
. : . : . : . : . : . :
JMFS048A10+ AACGACTATGATCGGCAATCGAGACGACACGTATGGTTCGAATTAATTAAATTAAAATTA
JMFS014B11+ AACGACGATGATCGGCAATCGAGACGACACGTATGGTTCGAATTAATTAAATTAAAATTA
JMFF040A13+ GATCGGCAATCGAGACGACACGTATGGTTCGAATTAATTAAATTAAAATTA
JMFF042G14+ GATCGGCAATCGAGACGACACGTATGGTTCGAATTAATTAAATTAAAATTA
JMFF051M18+ CGACGATGATCGGCAATCGAGACGGGACGTATGGTTCGAATTAATTAAATTAAAATTA
                      ____________________________________________________________
consensus AACGACGATGATCGGCAATCGAGACGACACGTATGGTTCGAATTAATTAAATTAAAATTA
 
. : . : . : . : . : . :
JMFS048A10+ ATGTTGATTAACGTCATCAATCTTAACAATCTGAGGATTATCTTATTGANGGCGAGGCCN
JMFS014B11+ ATGTTGAGAAACGACAGCAATCTTAACAATCTGAGGATTAACGAATTGATGGCGAGGCCT
JMFF040A13+ ATGTTGAGAAACGACAGCAATCTTAACAATCTGAGGATTAACGAATTGATGGCGAGGCCT
JMFF042G14+ ATGTTGAGAAACGACAGCAATCTTAACAATCTGAGGATTAACGAATTGATGGCGAGGCCT
JMFF051M18+ ATGTTGAGAAACGACAGCAATCTTAACAATCTGAGGATTAACGAATTGATGGCGAGGCCT
                      ____________________________________________________________
consensus ATGTTGAGAAACGACAGCAATCTTAACAATCTGAGGATTAACGAATTGATGGCGAGGCCT
 
. : . : . : . : . : . :
JMFS048A10+ NNTGTCTGGGAATTAAAATTANTGAAGAATTGAGGGCAGAAATGGGGATTGGATCCTTCG
JMFS014B11+ TTTGTCTGGGAATTAAAATTATTGAAGAATTGAGGGCAGAAATGGGGAACGGATCTTTCG
JMFF040A13+ TTTGTCTGGGAATTAAAATTATTGAAGAATTGAGGGCAGAAATGGGGAACGGATCTTTCG
JMSF004K06+ AGGGCAGAAATGGGGAACGGATCTTTCG
JMFF042G14+ TTTGTCTGGGAATTAAAATTATTGAAGAATTGAGGGCAGAAATGGGGAACGGATCTTTCG
JMFF051M18+ TTTGTCTGGGAATTAAAATTATTGAAGAATGAGGGGCAGAAATGGGGAACGGATCTTTCG
                      ____________________________________________________________
consensus TTTGTCTGGGAATTAAAATTATTGAAGAATTGAGGGCAGAAATGGGGAACGGATCTTTCG
 
. : . : . : . : . : . :
JMFS048A10+ TCGGAGTTAGAGAAACCTATCTTCACCTAACAGTTCATGCGTATTCTGTAACNACCGCTG
JMFS014B11+ TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
JMFF040A13+ TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
JMSF004K06+ TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
JMFF042G14+ TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
JMFF051M18+ TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
                      ____________________________________________________________
consensus TCGGAGTTAGAGAAACCTAACTTCACCAAACAGCTCATGCGTATTCCGAAACTACCGCTG
 
. : . : . : . : . : . :
JMFS048A10+ CCCTTGAGGAAGACAATCGGGCGGA
JMFS014B11+ CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
JMFF040A13+ CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
JMSF004K06+ CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
JMFF042G14+ CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
JMFF051M18+ CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
                      ____________________________________________________________
consensus CCCCTGAGGAAGACAATCGGGCGGAGGAGGAGACGGCGCCGTGGCGGAGGATGAGGACAA
 
. : . : . : . : . : . :
JMFS014B11+ ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
JMFF040A13+ ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
JMSF004K06+ ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
JMFF042G14+ ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
JMFF051M18+ ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
                      ____________________________________________________________
consensus ATCAGAAATCCGGCGACGGGAAGGACGAGACTCAATGGAAAGGGTTTAGACGAGGAAATC
 
. : . : . : . : . : . :
JMFS014B11+ GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCT
JMFF040A13+ GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCTTGTTGTTTGGTGT
JMSF004K06+ GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCTTGTTGTTTGGTGT
JMFF042G14+ GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCTTGTTGTTTGGTGT
JMFF051M18+ GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCTTGTTGTTTGGTGT
                      ____________________________________________________________
consensus GATCGACCGACACGGCGGCGCGTAATCCAAATCACACTTTTACTTCTTGTTGTTTGGTGT
 
. : . : . : . : . : . :
JMFF040A13+ GGGTTT
JMSF004K06+ GGGTTTGGGTTTTTGGTGCGAAGGGAGCGGTTGGATTTTATAGACTTGGGGGGCCTAGTC
JMFF042G14+ GGGTTTGGGTTTTTGGTGCGAAGGGAGCGGTTGGATTTTATAGACTTGGGGGGCCTAGTC
JMFF051M18+ GGGTTTGGGTTTTTGGTGCGAAGGGAGCGGTTGGATTTTATAGACTTGGGGGGCCTAGTC
                      ____________________________________________________________
consensus GGGTTTGGGTTTTTGGTGCGAAGGGAGCGGTTGGATTTTATAGACTTGGGGGGCCTAGTC
 
. : . : . : . : . : . :
JMSF004K06+ ATTACCCCTAGGGAGAAGAATTTTCATATTGAATTCTAACTAGGAACAAATCACTAGGGA
JMFF042G14+ ATTACCCCTAGGGAGAAGAATTTTCATATTGAATTCTAACTAGGAACAAATCACTAGGGA
JMFF051M18+ ATTACCCCTAGGGAGAAGAATTTTCATATTGAATTCTAACTAGGAACAAATCACTAGGGA
                      ____________________________________________________________
consensus ATTACCCCTAGGGAGAAGAATTTTCATATTGAATTCTAACTAGGAACAAATCACTAGGGA
 
. : . : . : . : . : . :
JMSF004K06+ CT
JMFF042G14+ CTAGGGAGAATTAAT
JMFF051M18+ CTAGGGAGAATTAATGAGATTTGAACCCATGAAATAAACATTTTATAACATAAAATTTAT
                      ____________________________________________________________
consensus CTAGGGAGAATTAATGAGATTTGAACCCATGAAATAAACATTTTATAACATAAAATTTAT