Contig 013000:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS112F04+                                               TCCCCAAAAGCAGCTTTACAACTT
                      ____________________________________________________________
consensus                                                 TCCCCAAAAGCAGCTTTACAACTT
 
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JMFS112F04+           CTAACTTAGTGTCTCAACAAGAATTGCAAAATATTCCTACAAAAACCTTGTTCTAAGCAG
JMFF050O12+                               GAATTGCAAAATATTCNTACAAAAACC-TGTTCTAAGCAG
                      ____________________________________________________________
consensus             CTAACTTAGTGTCTCAACAAGAATTGCAAAATATTCCTACAAAAACCTTGTTCTAAGCAG
 
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JMFS112F04+           TTTCAGAGGTTTTTACAAATTTCCTGTAAGGGAATCTGGGAAATATATAGAGATTCAACA
JMFF050O12+           TTTCAGAGGTTTTTACAAATTTCCTGTAAGGGAATCTGGGAAATATATAGAGATTCAACA
                      ____________________________________________________________
consensus             TTTCAGAGGTTTTTACAAATTTCCTGTAAGGGAATCTGGGAAATATATAGAGATTCAACA
 
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JMFS112F04+           TCTTTCTCATGGGGTTACTGATAAACCTCAGAATTAACAGTCCAAGAAGGTCAAATCCAT
JMFF050O12+           TCTTTCTCATGGGGTTACTGATAAACCTCAGAATTAACAGTCCAAGAAGGTCAAATCCAT
                      ____________________________________________________________
consensus             TCTTTCTCATGGGGTTACTGATAAACCTCAGAATTAACAGTCCAAGAAGGTCAAATCCAT
 
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JMFS112F04+           AAGATTTGCACAAGTCAAGAAATCAAGGTTCACAGATCTGGTGATTTTCTGTAATCAATC
JMFF050O12+           AAGATTTGCACAAGTCAAGAAATCAAGGTTCACAGATCTGGTGATTTTCTGTAATCAATC
                      ____________________________________________________________
consensus             AAGATTTGCACAAGTCAAGAAATCAAGGTTCACAGATCTGGTGATTTTCTGTAATCAATC
 
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JMFS112F04+           AAAATTTAGCAGCAGCAACAGTGGTTTTAAGTTACCTTTGACTGATTGGTTGACGGAATC
JMFF050O12+           AAAATTTAGCAGCAGCAACAGTGGTTTTAAGTTACCTTTGACTGATTGGTTGACGGAATC
                      ____________________________________________________________
consensus             AAAATTTAGCAGCAGCAACAGTGGTTTTAAGTTACCTTTGACTGATTGGTTGACGGAATC
 
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JMFS112F04+           CAAAACTGGGGTTCTTGCAATTAGAATTTTCAGATCCAAGTTCACATCAATTGAAACCCT
JMFF050O12+           CAAAACTGGGGTTCTTGCAATTAGAATTTTCAGATCCAAGTTCACATCAATTGAAACCCT
                      ____________________________________________________________
consensus             CAAAACTGGGGTTCTTGCAATTAGAATTTTCAGATCCAAGTTCACATCAATTGAAACCCT
 
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JMFS112F04+           TCATCCAACTTCACCATCGTCATCACACAAAGTCCGAAAGATCAATGTTTAGCAAGATCT
JMFF050O12+           TCATCCAACTTCACCATCGTCATCACACAAAGTCCGAAAGATCAATGTTTAGCAAGATCT
                      ____________________________________________________________
consensus             TCATCCAACTTCACCATCGTCATCACACAAAGTCCGAAAGATCAATGTTTAGCAAGATCT
 
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JMFS112F04+           ATTAAGATGATCCGGGTCAATTTCATGCCCGGTACCCCCCCCAAAAAAATCTGTTAGGGC
JMFF050O12+           ATTAAGATGATCCGGGTCAATTTCATGCCCGGTACCCCCCCCAAAAAAATCTGTTAGGGC
                      ____________________________________________________________
consensus             ATTAAGATGATCCGGGTCAATTTCATGCCCGGTACCCCCCCCAAAAAAATCTGTTAGGGC
 
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JMFS112F04+           AAGATCAATCCGGGCAAATTTGTGTGTATGAATTCAAATCAACATGGCAGATCTACCTAC
JMFF050O12+           AAGATCAATCCGGGCAAATTTGTGTGTATGAATTCAAATCAACATGGCAGATCTACCTAC
                      ____________________________________________________________
consensus             AAGATCAATCCGGGCAAATTTGTGTGTATGAATTCAAATCAACATGGCAGATCTACCTAC
 
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JMFS112F04+           GAAACTATGGATATTAGTATTTTCATTGTTCTATTTATTCATCTTTCTTTTTTTCTTTTT
JMFF050O12+           GAAACTATGGATATTAGTATTTTCATTGTTCTATTTATTCATCTTTCTTTTTTTCTTTTT
                      ____________________________________________________________
consensus             GAAACTATGGATATTAGTATTTTCATTGTTCTATTTATTCATCTTTCTTTTTTTCTTTTT
 
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JMFS112F04+           T                                                           
JMFF050O12+           TCCTTTGTGATTTTGTGGAGTGAGAAAAAAGAAGAAAAATTGAGACGCAATAGCTGCTAC
                      ____________________________________________________________
consensus             TCCTTTGTGATTTTGTGGAGTGAGAAAAAAGAAGAAAAATTGAGACGCAATAGCTGCTAC