Contig 012999:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050N22Sequence632012999 (4)emb|CBI35858.3|8e-77unnamed protein product [Vitis vinifera]568008397 (8)emb|CDO97842.1|4e-68unnamed protein product [Coffea canephora]
JMSF004O04Sequence322012999 (4)emb|CBI35858.3|5e-36unnamed protein product [Vitis vinifera]320008397 (8)emb|CDO97842.1|1e-52unnamed protein product [Coffea canephora]
JMSF015O16Sequence481012999 (4)emb|CBI35858.3|4e-74unnamed protein product [Vitis vinifera]693008397 (8)ref|XP_004235547.1|9e-101PREDICTED: cytochrome P450 71A1-like [Solanum lycopersicum]
JMSF017B13Sequence484012999 (4)emb|CBI35858.3|3e-74unnamed protein product [Vitis vinifera]736008397 (8)emb|CDO97842.1|2e-115unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF017B13+                             AATTCATGGGTGCGGATATGCTCAAAAGAGTCGAGGCGCTTG
                      ____________________________________________________________
consensus                               AATTCATGGGTGCGGATATGCTCAAAAGAGTCGAGGCGCTTG
 
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JMSF017B13+           GCACTAAATACCTCCATGGTGAACATTCGCCGTGCTTGGTGCCAATATGGACCGTATTGT
                      ____________________________________________________________
consensus             GCACTAAATACCTCCATGGTGAACATTCGCCGTGCTTGGTGCCAATATGGACCGTATTGT
 
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JMSF015O16+                                              CTTTCCGGCAACATTTTTGGGTCTG
JMSF017B13+           GACCATGTGACGTTGGAATAGTTGTACGTTAGGTGCTTTCCGGCAACATTTTTGGGTCTG
JMFF050N22+                                              CTTTCCGGCAACATTTTTGGGTCTG
                      ____________________________________________________________
consensus             GACCATGTGACGTTGGAATAGTTGTACGTTAGGTGCTTTCCGGCAACATTTTTGGGTCTG
 
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JMSF015O16+           TCAACGAAGTTGATGTCCATGGTTTTGAGGAAGGTCTTGGCCATTTCTGCGGAAGATCCG
JMSF017B13+           TCAACGAAGTTGATGTCCATGGTTTTGAGGAAGGTCTTGGCCATTTCTGCGGAAGATCCG
JMSF004O04+                                                          TGCGGAAGATCCG
JMFF050N22+           TCAACGAAGTTGATGTCCATGGTTTTGAGGAAGGTCTTGGCCATTTCTGCGGAAGATCCG
                      ____________________________________________________________
consensus             TCAACGAAGTTGATGTCCATGGTTTTGAGGAAGGTCTTGGCCATTTCTGCGGAAGATCCG
 
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JMSF015O16+           ACCACCACCGGGAAGGACCCAAACTGGAGCTGCATGATGGGGCCATACTTCACCGACAAA
JMSF017B13+           ACCACCACCGGGAAGGACCCAAACTGGAGCTGCATGATGGGGCCATACTTCACCGACAAA
JMSF004O04+           ACCACCACCCGGAAGGACCCAAACTGGAGCTGCATGATGGGGCCATACTTCACCGACAAA
JMFF050N22+           ACCACCACCGGGAAGGACCCAAACTGGAGCTGCATGATGGGGCCATACTTCACCGACAAA
                      ____________________________________________________________
consensus             ACCACCACCGGGAAGGACCCAAACTGGAGCTGCATGATGGGGCCATACTTCACCGACAAA
 
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JMSF015O16+           TCGTGGATGGACCGGTGAGGGAGGCTTCCGATGAGGTTCAAGTTTCCGATGACCGGCCAT
JMSF017B13+           TCGTGGATGGACCGGTGAGGGAGGCTTCCGATGAGGTTCAAGTTTCCGATGACCGGCCAT
JMSF004O04+           TCGTGGATGGACCGGTGAGGGAGGCTTCCGATGAGGTTCAAGTTTCCGATGACCGGCCAT
JMFF050N22+           TCGTGGATGGACCGGTGAGGGAGGCTTCCGATGAGGTTCAAGTTTCCGATGACCGGCCAT
                      ____________________________________________________________
consensus             TCGTGGATGGACCGGTGAGGGAGGCTTCCGATGAGGTTCAAGTTTCCGATGACCGGCCAT
 
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JMSF015O16+           GGTTTTGGGCCCGGCGGTAGATGAAGTTTTCTCCGCCACCGGAGATGTTTTGCGAGGAGG
JMSF017B13+           GGTTTTGGGCCCGGCGGTAGATGAAGTTTTCTCCGCCACCGGAGATGTTTTGCGAGGAGG
JMSF004O04+           GGTTTTGGGCCCGGCGGTAGATGAAGTTTTCTCCGCCACCGGAGATGTTTTGCGAGGAGG
JMFF050N22+           GGTTTTGGGCCCGGCGGTAGATGAAGTTTTCTCCGCCACCGGAGATGTTTTGCGAGGAGG
                      ____________________________________________________________
consensus             GGTTTTGGGCCCGGCGGTAGATGAAGTTTTCTCCGCCACCGGAGATGTTTTGCGAGGAGG
 
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JMSF015O16+           AGAAGTGCAATGGTGGACACCCAGGCTGCTGCATAGGATATCCAAGTTGCAGTAGGTGAC
JMSF017B13+           AGAAGTGCAATGGTGGACACCCAGGCTGCTGCATAGGATATCCAAGTTGCAGTAGGTGAC
JMSF004O04+           AGAAGTGCAATGGTGGACACCCAGGCTGCTGCATAGGATATCCAAGTTGCAGTAGGTGAC
JMFF050N22+           AGAAGTGCAATGGTGGACACCCAGGCTGCTGCATAGGATATCCAAGTTGCAGTAGGTGAC
                      ____________________________________________________________
consensus             AGAAGTGCAATGGTGGACACCCAGGCTGCTGCATAGGATATCCAAGTTGCAGTAGGTGAC
 
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JMSF015O16+           TCCATTGAATCAAAAC                                            
JMSF017B13+           TCCATTGAATCAAAAC                                            
JMSF004O04+           TCCATTGAATCAAAACAATTTGTTTAATTGATAGAATGAGATTTTTATATATAGTAGCCT
JMFF050N22+           TCCATTGAATCAAAACAATTTGTTTAATTGATAGAATGAGATTTTTATATATAGTAGCCT
                      ____________________________________________________________
consensus             TCCATTGAATCAAAACAATTTGTTTAATTGATAGAATGAGATTTTTATATATAGTAGCCT
 
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JMSF004O04+           GGGGT                                                       
JMFF050N22+           GGGGTGTTGGGATTTGGGAGCATGCAGATGCTGCCGGTGATAATGGTGAGCGTCTAAGTC
                      ____________________________________________________________
consensus             GGGGTGTTGGGATTTGGGAGCATGCAGATGCTGCCGGTGATAATGGTGAGCGTCTAAGTC