Contig 012998:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050B12Sequence526012998 (2)ref|XP_004238532.1|7e-84PREDICTED: alcohol dehydrogenase-like 1 isoform X1 [Solanum lycopersicum]415012477 (2)gb|KJB64116.1|1e-24hypothetical protein B456_010G038400 [Gossypium raimondii] gb|KJB64117.1| hypoth
JMFN037M13Sequence608012998 (2)ref|XP_006363286.1|3e-44PREDICTED: alcohol dehydrogenase-like 1-like [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN037M13+                                                            AGTAATTTTTT
                      ____________________________________________________________
consensus                                                              AGTAATTTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN037M13+           AAGCTTTNTAATTGGAATGAAACGCTAGTATTTGTTATGAATATAACATATTAAGTGGAT
                      ____________________________________________________________
consensus             AAGCTTTNTAATTGGAATGAAACGCTAGTATTTGTTATGAATATAACATATTAAGTGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN037M13+           TTGATACTTGACGAGAGCTGGCGAAAGCGTCTTGCATCAAGGATGCTAAACCAATGCACT
                      ____________________________________________________________
consensus             TTGATACTTGACGAGAGCTGGCGAAAGCGTCTTGCATCAAGGATGCTAAACCAATGCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN037M13+           CGAAGCAATAGTCTGCCCCTCCATTGGTTATTTTTTTTTATGACCTCAGCTACTGAACTT
                      ____________________________________________________________
consensus             CGAAGCAATAGTCTGCCCCTCCATTGGTTATTTTTTTTTATGACCTCAGCTACTGAACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN037M13+           TCCCCACAATTAGTTGGATTGATAAAATCTGTTAGTCCAAACTTCTTCCCAAGTTCAAAC
                      ____________________________________________________________
consensus             TCCCCACAATTAGTTGGATTGATAAAATCTGTTAGTCCAAACTTCTTCCCAAGTTCAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN037M13+           TTTTCCGGAATCAAGTCAACCCCAATAATTTTGGATGCTCCACGTAGCCTTGCACCTTCA
                      ____________________________________________________________
consensus             TTTTCCGGAATCAAGTCAACCCCAATAATTTTGGATGCTCCACGTAGCCTTGCACCTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN037M13+           GCAACCGCAAGCCCCACAGCACCAAGTCCAAAAATTGCAACAGTAGAGCCTTCTTCAATC
                      ____________________________________________________________
consensus             GCAACCGCAAGCCCCACAGCACCAAGTCCAAAAATTGCAACAGTAGAGCCTTCTTCAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN037M13+           TTAGCAAATTCCAGGATGCCCCTATACCTGTAGTGACACCACAACTGAGCAAGCAAGCCA
                      ____________________________________________________________
consensus             TTAGCAAATTCCAGGATGCCCCTATACCTGTAGTGACACCACAACTGAGCAAGCAAGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN037M13+           TATCAATGGGGAAATCAGGGTTCATCTTAACAACATGAGTGATATCTACCACAGTGTACT
JMFF050B12+                         TCAGGGTTCATCTTAACAACATGAGTGATATCTACCTCAGTGTACT
                      ____________________________________________________________
consensus             TATCAATGGGGAAATCAGGGTTCATCTTAACAACATGAGTGATATCTACCTCAGTGTACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN037M13+           CAGAAAAGCTGGACACATTCAAAAGATGATGAATGCTTTGTCCATCCTTATCCTTGAACC
JMFF050B12+           CAGAAAAGCTGGACACATTCAAAAGATGATGAATGCTTTGTCCATCCTTATCCTTGAACC
                      ____________________________________________________________
consensus             CAGAAAAGCTGGACACATTCAAAAGATGATGAATGCTTTGTCCATCCTTATCCTTGAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN037M13+           GGCTTGTTCCATCTCTAGGCATTCCACTTTGATACCTAACTGCAAATTTTGTGCAAG   
JMFF050B12+           GGCTTGTTCCATCTCTAGGCATTCCACTCAGATACCTAACTGCAAATTTTGTGCAAGTGT
                      ____________________________________________________________
consensus             GGCTTGTTCCATCTCTAGGCATTCCACTTTGATACCTAACTGCAAATTTTGTGCAAGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050B12+           TACCTTTTGGGGATTTGCAATCCCTACATTCCCCGCAGTTCCTTATAAACACAGGGATTA
                      ____________________________________________________________
consensus             TACCTTTTGGGGATTTGCAATCCCTACATTCCCCGCAGTTCCTTATAAACACAGGGATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050B12+           CCAAATCCCCAAATCTCACTTCATCCACATTTTCACCCACACTCTCAACCACACCGGATG
                      ____________________________________________________________
consensus             CCAAATCCCCAAATCTCACTTCATCCACATTTTCACCCACACTCTCAACCACACCGGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050B12+           CTTCATGCCCTAGGATTCTTGGAAAAAAAGACAGTGGTCCAGACTTAAATTTCCAGTAAG
                      ____________________________________________________________
consensus             CTTCATGCCCTAGGATTCTTGGAAAAAAAGACAGTGGTCCAGACTTAAATTTCCAGTAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050B12+           TAAGATCAGAATGGCAGAGGGATGAACAGAGAATCTTAATCCGAACCTCCCCAGGCTTGG
                      ____________________________________________________________
consensus             TAAGATCAGAATGGCAGAGGGATGAACAGAGAATCTTAATCCGAACCTCCCCAGGCTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050B12+           GAGGAGCCACTTCGATTTCTTCTATCACAAGTGCCTCTCCAGCTCCTATACATACTGCAG
                      ____________________________________________________________
consensus             GAGGAGCCACTTCGATTTCTTCTATCACAAGTGCCTCTCCAGCTCCTATACATACTGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050B12+           CTTTGCATTTGATAGGTTTCCCTATCGTGTTTGGTGCAGACTTGAACTCCATCACACCGG
                      ____________________________________________________________
consensus             CTTTGCATTTGATAGGTTTCCCTATCGTGTTTGGTGCAGACTTGAACTCCATCACACCGG