Contig 012992:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF048N17-                                                        CCTTATGGCGGATC
                      ____________________________________________________________
consensus                                                           CCTTATGGCGGATC
 
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rJMFF048N17-          ACCCTGGAGAGTTTTTTTTTTTTTTTTGCCAATCAAATCAACAAAAGAGTTTTCACAACA
JMFN028L12+                                     TGCCAATCAAATCAACAAAAGAGTTTTCACAACA
                      ____________________________________________________________
consensus             ACCCTGGAGAGTTTTTTTTTTTTTTTTGCCAATCAAATCAACAAAAGAGTTTTCACAACA
 
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rJMFF048N17-          CCATTCACTTCACATTATCTATTATTGCTCTCAAACATAGTATAAAAATTCCAAAACTCC
JMFN028L12+           CCATTCACTTCACATTATCTATTATTGCTCTCAAACATAGTATAAAAATTCCAAAACTCC
                      ____________________________________________________________
consensus             CCATTCACTTCACATTATCTATTATTGCTCTCAAACATAGTATAAAAATTCCAAAACTCC
 
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rJMFF048N17-          AACAAAGCAACATTGATGGGACCGAGTAGCAATACACTCCACTCCAAAAGGATATAATAC
JMFN028L12+           AACAAAGCAACATTGATGGGACCGAGTAGCAATACACTCCACTCCAAAAGGATATAATAC
                      ____________________________________________________________
consensus             AACAAAGCAACATTGATGGGACCGAGTAGCAATACACTCCACTCCAAAAGGATATAATAC
 
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rJMFF048N17-          AATAAAAATTTTCGAGCATAAAAGATAAAGATGTGACATTTACCAAAGATTTGATGGATC
JMFN028L12+           AATAAAAATTTTCGAGCATAAAAGATAAAGATGTGACATTTACCAAAGATTTGATGGATC
JMFF048N17+                        GAGCATAAAAGATAAAGATGTGACATTTACCAAAGATTTGATGGATC
                      ____________________________________________________________
consensus             AATAAAAATTTTCGAGCATAAAAGATAAAGATGTGACATTTACCAAAGATTTGATGGATC
 
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rJMFF048N17-          TATCGACGGAAGAGGGATCATACGGGGAGCTTTTCAACGGAGGCCGCTAGGGTGTCAGGT
JMFN028L12+           TATCGACGGAAGAGGGATCATACGGGGAGCTTTTCAACGGAGGCCGCTAGGGTGTCAGGT
JMFF048N17+           TATCGACGGAAGAGGGATCATACGGGGAGCTTTTCAACGGAGGCCGCTAGGGTGTCAGGT
                      ____________________________________________________________
consensus             TATCGACGGAAGAGGGATCATACGGGGAGCTTTTCAACGGAGGCCGCTAGGGTGTCAGGT
 
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rJMFF048N17-          TTAGGGTTAGGGCTCAAGCTGTCAGGGTCGATGTGAGAAGGAGTGAGGGAATTGATCATG
JMFN028L12+           TTAGGGTTAGGGCTCAAGCTGTCAGGGTCGATGTGAGAAGGAGTGAGGGAATTGATCATG
JMFF048N17+           TTAGGGTTAGGGCTCAAGCTGTCAGGGTCGATGTGAGAAGGAGTGAGGGAATTGATCATG
                      ____________________________________________________________
consensus             TTAGGGTTAGGGCTCAAGCTGTCAGGGTCGATGTGAGAAGGAGTGAGGGAATTGATCATG
 
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rJMFF048N17-          AGGGGGACATTCTTGGCCTCTTCATCATCCTC                            
JMFN028L12+           AGGGGGACATTCTTGGCCTCTTCATCATCCTCGTCGTCGCTGTCGAAGGTGTTAAGGTGG
JMFF048N17+           AGGGGGACATTCTTGGCCTCTTCATCATCCTCGTCGTCGCTGTCGAAGGTGTTAAGGTGG
                      ____________________________________________________________
consensus             AGGGGGACATTCTTGGCCTCTTCATCATCCTCGTCGTCGCTGTCGAAGGTGTTAAGGTGG
 
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JMFN028L12+           ACACAGGAGCAACGCTCCAAGGAGGCGAAGAACGCCGACGCGACGCTTGAGCCAAACCAC
JMFF048N17+           ACACAGGAGCAACGCTCCAAGGAGGCGAAGAACGCCGACGCGACGCTTGAGCCAAACCAC
                      ____________________________________________________________
consensus             ACACAGGAGCAACGCTCCAAGGAGGCGAAGAACGCCGACGCGACGCTTGAGCCAAACCAC
 
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JMFN028L12+           CGAGCCAGACCGTCCAGCTTATCGATGTTGGTGTTCTCCATATCTATCCAGCGGAGATTC
JMFF048N17+           CGAGCCAGACCGTCCAGCTTATCGATGTTGGTGTTCTCCATATCTATCCAGCGGAGATTC
                      ____________________________________________________________
consensus             CGAGCCAGACCGTCCAGCTTATCGATGTTGGTGTTCTCCATATCTATCCAGCGGAGATTC
 
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JMFN028L12+           AC                                                          
JMFF048N17+           ACAAAACCCTACAGAGAATTTCTGGAGTAAGGTTTCCCTTTGTCTCAATCCAACGCGATT
                      ____________________________________________________________
consensus             ACAAAACCCTACAGAGAATTTCTGGAGTAAGGTTTCCCTTTGTCTCAATCCAACGCGATT
 
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JMFF048N17+           TAGAGCGACAAAGAAGTGGAAGAAGGAGAAGAATACAACAAGGCACTCTACAGACAGAAT
                      ____________________________________________________________
consensus             TAGAGCGACAAAGAAGTGGAAGAAGGAGAAGAATACAACAAGGCACTCTACAGACAGAAT