Contig 012990:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS055B03+                                                      AATGGCACCATCACCGT
                      ____________________________________________________________
consensus                                                        AATGGCACCATCACCGT
 
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JMFF050E21+               AGGTACTTCTCCAAGCAAACGCAAGGCCACATAGTTAAGTGCTGACCCAATCATGG
JMFS055B03+           CATCAGGTCCTTCTCCAAGCAAACGCAAGGCCACATAGTTGAGTGCTGACCCAATCATGG
                      ____________________________________________________________
consensus             CATCAGGTCCTTCTCCAAGCAAACGCAAGGCCACATAGTTGAGTGCTGACCCAATCATGG
 
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JMFF050E21+           TACTGTGTCCATCTATGTACAATCCCCATCCACCATCTTCATTTTGATGATTGTAAATGT
JMFS055B03+           TACTGTGTCCACCTATGTAGAATCCCCATCCACCATCTTCATTTTGATGATTGTAGAGAA
                      ____________________________________________________________
consensus             TACTGTGTCCATCTATGTAGAATCCCCATCCACCATCTTCATTTTGATGATTGTAGATGT
 
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JMFF050E21+           ATCGGACAATTTCTTTCGTGTGCTCTGAGGTTAAAACTGTATTGATTGCTCCACAAATGT
JMFS055B03+           ATCGAATTAATTCTTTCTTGTGTTCTGATGTCAGAATGGTATTCATTGCGCCACTTATGT
                      ____________________________________________________________
consensus             ATCGGATTATTTCTTTCTTGTGTTCTGATGTTAGAATTGTATTGATTGCTCCACTTATGT
 
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JMFF050E21+           ACAACGCAATAAGCAAGGGAGGAGTGAAAAACATAGGGCCAGCATTCAGAGCTGGCCAGT
JMFS055B03+           ACAACACAATCATCAAAGGAGGAATGAAAAACATTGGTCCAGAATGCTCAGCTGGCCAGT
                      ____________________________________________________________
consensus             ACAACGCAATCATCAAGGGAGGAGTGAAAAACATTGGTCCAGCATTCTGAGCTGGCCAGT
 
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JMFF050E21+           GTCCGTCTCTAGCTTGAAGTGCACGGTTCAATCGTACGGCTTTTCTAACAGCGGTTGTAA
JMFS055B03+           GCCCATCTTTGGCTTGAAGTGCACGGTTCAGCCGTACGGCTTTTCTAACTGCGGTTGTGA
                      ____________________________________________________________
consensus             GTCCGTCTTTGGCTTGAAGTGCACGGTTCAGTCGTACGGCTTTTCTAACTGCGGTTGTGA
 
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JMFF050E21+           CCGCCGAGTAGTTCACTTCTT---CGTCTCCTAGCCTTATTGGGGGAGTGTTCAACACGT
JMFS055B03+           CTGCCTCATAGTTCACTTCTTCTCCGTCTCTTAATCTTATTGCTGGAAGACTTAACACAT
JMFF037P01+                                                                 ACACAT
JMFF048K06+                                                                AACACAT
                      ____________________________________________________________
consensus             CTGCCTCGTAGTTCACTTCTTCTCCGTCTCTTAGTCTTATTGGTGGAGTGTTTAACACAT
 
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JMFF050E21+           CAATCCCACTTTCTTTGATCATCTGCATTCTCATTATCAAATCACCGCAGGCATGGGAAC
JMFS055B03+           CAACCCCACTTTCTTTGATCATCTGCATTCTCTTGAACAAATCACTGGAAGCACGGAAAC
JMFF037P01+           CAATCCCACTTTCTTTAATCATCTGCATTCTCATTAACAAATCACCGCAGGCACGGAAAC
JMFF048K06+           CAACCCCACTTTCTTTGATCATCTGCATTCTCTTGAACAAATCACTGGAAGCACGGAAAC
                      ____________________________________________________________
consensus             CAATCCCACTTTCTTTGATCATCTGCATTCTCTTTAACAAATCACTGGAGGCACGGAAAC
 
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JMFF050E21+           CTTTCTCCGGCCGGTTTTCTCTAAATTCTCGGCGGGCATTTTCAAGCGCTTCTCGTTCTT
JMFS055B03+           CTTTCTC---CCGGTTTTTTCTGAACTCTTGGCGGGCATTTTCAAGCGCTTCTCGTTCTT
JMFF037P01+           CTTTCTC---CCGGTTTTTTCTGAACTCTAGGCGGGCTTTTTCANCCGCTTCTCGTTCTT
JMFF048K06+           CTTTCTC---CCGGTTTTTTCTGAACTCTTGGCGGGCATTTTCAAGCGCTTCTCGTTCTT
                      ____________________________________________________________
consensus             CTTTCTC---CCGGTTTTTTCTGAACTCTTGGCGGGCATTTTCAAGCGCTTCTCGTTCTT
 
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JMFF050E21+           CCGGCGTGCCGGCGTTAGGGTCATACTCCCATATTTGTCTGCCGACGTAGTTGTTGGTAC
JMFS055B03+           CTGGCGTGCCGGCGTTAGGGTGGTACTCCCATATTTGTCGGCCGACATAGTTGTTGGTAC
JMFF037P01+           CCGGCGTACCGGCGCCAGGGTCGTACTCCCATGTTTGTCTGCCAACGTAGTTGTTTGTAC
JMFF048K06+           CTGGCGTGCCGGCGTTAGGGTGGTACTCCCATATTTGTCGGCCGACATAGTTGTTGGTAC
                      ____________________________________________________________
consensus             CTGGCGTGCCGGCGTTAGGGTGGTACTCCCATATTTGTCTGCCGACGTAGTTGTTGGTAC
 
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JMFF050E21+           TGTACATGTACGGCCCGCCACCTTCGGCAACCTTAAGCTTCCACATCT            
JMFS055B03+           TGTAAATGTACGGCCCGCCACCTTCGCCAATCTTAAGCTTCCACATCT            
JMFF037P01+           TGTACATGTACGGCCCGCCACCTTCGCCAACCTTAAGCTTCCACATCT            
JMFF048K06+           TGTAAATGTACGGCCCGCCACCTTCGCCAATCTTAAGCTTCCACATCTTCTTGCTAGTCT
                      ____________________________________________________________
consensus             TGTACATGTACGGCCCGCCACCTTCGCCAATCTTAAGCTTCCACATCTTCTTGCTAGTCT
 
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JMFF048K06+           GCTGGTGATTTAACAGAAGAGGAAAACGAAAACTAGAAAGACATGCATATGATAACAACG
                      ____________________________________________________________
consensus             GCTGGTGATTTAACAGAAGAGGAAAACGAAAACTAGAAAGACATGCATATGATAACAACG
 
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JMFF048K06+           GAATATATATATAGGAAAGGGAAGGGATCGGGGTGCGGGAATGACTTCCTGTGTGATCGG
                      ____________________________________________________________
consensus             GAATATATATATAGGAAAGGGAAGGGATCGGGGTGCGGGAATGACTTCCTGTGTGATCGG