clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004M20 | Sequence | 465 | 012977 (26) | ref|XP_002531669.1| | 2e-90 | 40S ribosomal protein S6, putative [Ricinus communis] gb|EEF30713.1| 40S ribosom | 347 | 012977 (26) | ref|XP_011003031.1| | 3e-15 | PREDICTED: 40S ribosomal protein S6-like [Populus euphratica] |
JMFF012E22 | Sequence | 546 | 012977 (26) | ref|XP_002531669.1| | 9e-111 | 40S ribosomal protein S6, putative [Ricinus communis] gb|EEF30713.1| 40S ribosom | 210 | 012977 (26) | |||
JMFF012J24 | Sequence | 575 | 012977 (26) | ref|XP_011022822.1| | 1e-95 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | 772 | 002081 (29) | gb|KDP41410.1| | 5e-101 | hypothetical protein JCGZ_15817 [Jatropha curcas] |
JMFF022A22 | Sequence | 558 | 012977 (26) | ref|XP_011022822.1| | 6e-96 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | 790 | 012977 (26) | gb|KDP41410.1| | 2e-116 | hypothetical protein JCGZ_15817 [Jatropha curcas] |
JMFF023I05 | Sequence | 466 | 012977 (26) | ref|XP_011022822.1| | 2e-74 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | 749 | 012977 (26) | gb|KDP41410.1| | 4e-109 | hypothetical protein JCGZ_15817 [Jatropha curcas] |
JMFF030M01 | Sequence | 751 | 012977 (26) | gb|KDP41410.1| | 7e-102 | hypothetical protein JCGZ_15817 [Jatropha curcas] | |||||
JMFF046A12 | Sequence | 411 | 012977 (26) | gb|ADR71291.1| | 9e-60 | 40S ribosomal protein S6A [Hevea brasiliensis] | 212 | 012977 (26) | ref|XP_010259864.1| | 4e-07 | PREDICTED: 40S ribosomal protein S6-like isoform X1 [Nelumbo nucifera] |
JMFN012N22 | Sequence | 627 | 012977 (26) | gb|KDP41410.1| | 5e-98 | hypothetical protein JCGZ_15817 [Jatropha curcas] | |||||
JMFN025B03 | Sequence | 636 | 012977 (26) | gb|KDP41410.1| | 5e-118 | hypothetical protein JCGZ_15817 [Jatropha curcas] | |||||
JMFN029F21 | Sequence | 608 | 012977 (26) | ref|XP_011022822.1| | 6e-110 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | |||||
JMFN038L17 | Sequence | 618 | 012977 (26) | ref|XP_011022822.1| | 3e-111 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | |||||
JMFN041D23 | Sequence | 607 | 012977 (26) | ref|XP_011022822.1| | 2e-113 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | |||||
JMFN042G23 | Sequence | 619 | 012977 (26) | ref|XP_011022822.1| | 3e-113 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | |||||
JMSF005J04 | Sequence | 292 | 012977 (26) | ref|XP_009780041.1| | 1e-47 | PREDICTED: 40S ribosomal protein S6 [Nicotiana sylvestris] | 356 | 012977 (26) | ref|XP_008444852.1| | 2e-27 | PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo] |
JMSF023O05 | Sequence | 606 | 012977 (26) | ref|XP_011022822.1| | 4e-106 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | 763 | 012977 (26) | gb|KDP41410.1| | 5e-109 | hypothetical protein JCGZ_15817 [Jatropha curcas] |
JMSF042L10 | Sequence | 684 | 012977 (26) | ref|XP_002285752.1| | 2e-72 | PREDICTED: 40S ribosomal protein S6 [Vitis vinifera] emb|CBI19191.3| unnamed pro | |||||
JMSF043E12 | Sequence | 735 | 012977 (26) | ref|XP_009622898.1| | 2e-121 | PREDICTED: 40S ribosomal protein S6 [Nicotiana tomentosiformis] | 793 | 012977 (26) | gb|KDP41410.1| | 7e-98 | hypothetical protein JCGZ_15817 [Jatropha curcas] |
JMSF045N23 | Sequence | 342 | 012977 (26) | emb|CDP01503.1| | 5e-56 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMFF012E22- AGAGTGCAAANCAAATTGAGAACATCAATCTCAAACACGG
____________________________________________________________
consensus AGAGTGCAAANCAAATTGAGAACATCAATCTCAAACACGG
. : . : . : . : . : . :
rJMFF012E22- TAANGGAGCATTTCAANCTTGAGGATANTAGTATGAAGTAGAATGTTGAATGAACTCCAA
rJMFF004M20- GAGCATTTCAAGCTTGAGGATANTAGTATGAAGTAGAATGNTGAATGAACTCCAN
rJMFF030M01- ACTTGAGGATAATAGTATGAAGTAGAATGTTGAATGAACTCCAA
rJMSF023O05- ACTTGAGGATAATAGTATGAAGTAGAATGTTGAATGAACTCCAA
rJMFF023I05- ATAGTATGAAGTAGAATGTTGAATGAACTCCAA
rJMSF005J04- TAGAATGTTGAATGAACTCCAA
rJMFF046A12- TGAGGATAATAGTATGAAGTAGAATGTTGAATGAACTCCAA
rJMFF022A22- CTTGAGGATAATAGTATGAAGTAGAATGTTGAATGAACTCCAA
____________________________________________________________
consensus TAANGGAGCATTTCAAACTTGAGGATAATAGTATGAAGTAGAATGTTGAATGAACTCCAA
. : . : . : . : . : . :
rJMFF012E22- AATTCGCAAGACAANAATCCTCGATATTAAAGAACTAAGAAGACAATATGAAGTANGGCA
rJMFF004M20- AATTCGCAAGACNANAATCCTCGATATTAAAGAACTAAGAAGACAATATGAAGTANGGCA
rJMFF030M01- AATTCGCAAGACAAAAATCCTCGATATTAAAGAACTAAGAAGACAATATGAAGTAGGGCA
rJMSF023O05- AATTCGCAAGACAAAAATCCTCGATATTAAAGAACTAAGAAGACAATATGAAGTAGGGCA
rJMFF023I05- AATTCGCAAGACAAAAATCCTCGATATTAAAGAACTAAGAAGACAATATGAAGTAGGGCA
JMFN012N22+ TATGAAGTAGGGCA
rJMSF005J04- AATTCGCAAGACAAAAATCCTCGATATTAAAGAACTAAGAAGACAATATGAAGTAGGGCA
rJMFF046A12- CATTCGCAAGACAAAAATCCTCGATATTAAAGAACTAAGAAGACAATATGAAGTAGGGCA
rJMFF022A22- AATTCGCAAGACAAAAATCCTCGATATTAAAGAACTAAGAAGACAATATGAAGTAGGGCA
____________________________________________________________
consensus AATTCGCAAGACAAAAATCCTCGATATTAAAGAACTAAGAAGACAATATGAAGTAGGGCA
. : . : . : . : . : . :
rJMFF012E22- TTTGCNATTCTATCGCTTTAAGCANCNACGGATGGNTTTGAGGCAGTA
rJMFF004M20- TTTGCAATTCTATCGCTTTAANCANCNACGGATGGNTTTGAGGCAGTANAGAGTCTGGTC
rJMFF030M01- TTTGCAATTCTATCGCTTTAAGCAGCAACGGATGGCTTTGAGGCAGTAGAGAGTCTGGTC
rJMSF023O05- TTTGCAATTCTATCGCTTTAAGCAGCAACGGATGGCTTTGAGGCAGTAGAGAGTCTGGTC
rJMFF023I05- TTTGCAATTCTATCGCTTTAAGCAGCAACGGATGGCTTTGAGGCAGTAGAGAGTCTGGTC
rJMSF042L10- TTAAGCANCAACGGATGGCTTTGAGGCANTAGAGAGTCTGGTC
JMFN012N22+ TNTGCAATTCTATCGCTTTAAGCAGCAACGGATGGCTTTGAGGCAGTAGAGAGTCTGGTC
rJMSF043E12- TTAAGCAGCAACGGATGGCTTTGAGGCAGTAGAGAGTCTGGTC
rJMSF005J04- TTTGCAATTCTATCGCTTTAAGCAGCAACGGATGGCTTTGAGGCAGTAGAGAGTCTGGTC
rJMFF046A12- TTTGCAATTCTATCGCTTTAAGCAGCAACGGATGGCTTTGAGGCAGTAGAGAGTCTGGTC
rJMFF022A22- TTTGCAATTCTATCGCTTTAAGCAGCAACGGATGGCTTTGAGGCAGTAGAGAGTCTGGTC
____________________________________________________________
consensus TTTGCAATTCTATCGCTTTAAGCAGCAACGGATGGCTTTGAGGCAGTAGAGAGTCTGGTC
. : . : . : . : . : . :
rJMFF004M20- CTCTTCTTGGCCAAACTCTCACTGCGCCTCTCCCTCTGCTCCTTCAANCTAGAGGCAAGC
rJMFF030M01- CTCTTCTTGGCCAAACTCTCACTGCGCCTCTCCCTCTGCTCCTTCAACCTAGAGGCAAGC
rJMSF023O05- CTCTTCTTGGCCAAACTCTCACTGCGCCTCTCCCTCTGCTCCTTCAACCTAGAGGCAAGC
rJMFF023I05- CTCTTCTTGGCCAAACTCTCACTGCGCCTCTCCCTCTGCTCCTTCAACCTAGAGGCAAGC
rJMSF042L10- CTCTTCTTGGCCAAACTCTCACTGCGCCTCTCCCTCTGCTCCTTCAACCTAGAGGCAAGC
JMFN012N22+ CTCTTCTTGGCCAAACTCTCACTGCGCCTCTCCCTCTGCTCCTTCAACCTAGAGGCAAGC
rJMSF043E12- CTCTTCTTGGCCAAACTCTCACTGCGCCTCTCCCTCTGCTCCTTCAACCTAGAGGCAAGC
rJMSF005J04- CTCTTCTTGGCCAAACTCTCACTGCGCCTCTCCCTCTGCTCCTTCAACCTAGAGGCAAGC
rJMFF046A12- CTCTTCTTGGCCAAACTCTCACTGCGCCTCTCCCTCTGCTCCTTCAACCTA
rJMFF022A22- CTCTTCTTGGCCAAACTCTCACTGCGCCTCTCCCTCTGCTCCTTCAACCTAGAGGCAAGC
JMSF043E12+ TCCTTCAACCTAGAGGCAAGC
____________________________________________________________
consensus CTCTTCTTGGCCAAACTCTCACTGCGCCTCTCCCTCTGCTCCTTCAACCTAGAGGCAAGC
. : . : . : . : . : . :
rJMFF004M20- AGTTTCTGGTATTCANCAGCTTCAGTCTTGGCCTTGGCAATCCTCTGCTTCTTTTGGGCA
rJMFF030M01- AGTTTCTGGTATTCAGCAGCTTCAGTCTTGGCCTTGGCAATCCTCTGCTTCTTTTGGGCA
rJMSF023O05- AGTTTCTGGTATTCAGCAGCTTCAGTCTTGGCCTTGGCAATCCTCTGCTTCTTTTGGGCA
rJMFF023I05- AGTTTCTGGTATTCAGCAGCTTCAGTCTTGGCCTTGGCAATCCTCTGCTTCTTTTGGGCA
rJMSF042L10- AGTTTCTGGTATTCAGCAGCTTCAGTCTTGGCCTTGGCAATCCTCTGCTTCTTTTGGGCA
JMFN012N22+ AGTTTCTGGTATTCAGCAGCTTCAGTCTTGGCCTTGGCAATCCTCTGCTTCTTTTGGGCA
rJMSF043E12- AGTTTCTGGTATTCAGCAGCTTCAGTCTTGGCCTTGGCAATCCTCTGCTTCTTTTGGGCA
rJMSF005J04- AGTTTCTGGTATTCAGCAGCTTCAGTCTTGGCCTTGGCAATCCTCTGCTTCTTTTGGGCA
rJMFF022A22- AGTTTCTGGTATTCAGCAGCTTCAGTCTTGGCCTTGGCAATCCTCTGCTTCTTTTGGGCA
JMFN025B03+ TTCTTTTGGGCA
JMSF043E12+ AGTTTCTGGTATTCAGCAGCTTCAGTCTTGGCCTTGGCAATCCTCTGCTTCTTTTGGGCA
____________________________________________________________
consensus AGTTTCTGGTATTCAGCAGCTTCAGTCTTGGCCTTGGCAATCCTCTGCTTCTTTTGGGCA
. : . : . : . : . : . :
rJMFF004M20- ATTCCAGCTCTCTTCCNCTGGAGAGNCAATGGAGTGACAAGCCTCTGT
rJMFF030M01- ATTCGAGCTCTCTTCCTCTGGAGAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
rJMSF023O05- ATTCGAGCTCTCTTCCTCTGGAGAGTCAATGGAGTAACAAGCCTCTGTATCTTAGGAGCC
rJMFF023I05- ATTCGAGCTCTCTTCCTCTGGAGAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
rJMSF042L10- ATTCGAGCTCTCTTCCTCTGGAGAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
JMFN012N22+ ATTCGAGCTCTCTTCCTCTGGAGAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
rJMSF043E12- ATTCGAGCTCTCTTCCTCTGGAGAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
rJMSF005J04- ATTCGAGCTCTCTTCCTCTGGAGAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
rJMFF022A22- ATTCGAGCTCTCTTCCTCTGGAGAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
JMFN038L17+ GAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
JMFN029F21+ AGTGACAAGCCTCTGTATCTTAGGAGCC
JMFN042G23+ AGAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
JMFN041D23+ GAGAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
JMFN025B03+ GTGCGAGCTCTCTTCCTCTGGAGAGTCAAGGGAGTCACAAGCCTCTGTATCTTAGGAGCC
JMSF043E12+ ATTCGAGCTCTCTTCCTCTGGAGAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
JMSF023O05+ TCTTAGGAGCC
____________________________________________________________
consensus ATTCGAGCTCTCTTCCTCTGGAGAGTCAATGGAGTGACAAGCCTCTGTATCTTAGGAGCC
. : . : . : . : . : . :
rJMFF030M01- TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
rJMSF023O05- TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
rJMFF023I05- TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
rJMSF042L10- TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
JMFN012N22+ TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
rJMSF043E12- TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
rJMSF005J04- TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAAT
rJMFF022A22- TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
JMFN038L17+ TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
JMFN029F21+ TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTGNACATACTTC
JMFN042G23+ TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
JMFN041D23+ TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
JMFN025B03+ TTGCTTGCCTTCTTCCCGGATTTGGTGGTGAAATTACGGCGGTAGGTGTTGACATACTTC
JMFF012J24+ TACGGCGGTAGGTGTTGACATACTTC
JMSF043E12+ TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
JMFF012E22+ GGTAGGTGTTGACATACTTC
JMFF022A22+ CGGCGGTAGGTGTTGACATACTTC
JMSF023O05+ TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
____________________________________________________________
consensus TTGCTTGCCTTCTTCCCGGATTTGGTAGTGAAATTACGGCGGTAGGTGTTGACATACTTC
. : . : . : . : . : . :
rJMFF030M01- CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
rJMSF023O05- CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
rJMFF023I05- CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
rJMSF042L10- CTTACATCATCGTCCTTCNAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
JMFN012N22+ CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
rJMSF043E12- CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
rJMFF022A22- CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
JMFN038L17+ CTTACATCATCGTCCTTCGAGAGGTGNAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
JMFN029F21+ CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
JMFN042G23+ CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
JMFN041D23+ CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
JMFN025B03+ CTCACATCATCATCCTTGGAGAGGTTAAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
JMFF012J24+ CTCACATCATCATCCTTGGAGAGGTTAAAAAGCTTCNTAATCTTTGAAGCCCTCTTGGGA
JMSF043E12+ CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
JMFF012E22+ CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
JMFF022A22+ CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
JMSF023O05+ CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
____________________________________________________________
consensus CTTACATCATCGTCCTTCGAGAGGTTGAAAAGCTTCCTAATCTTTGAAGCCCTCTTGGGA
. : . : . : . : . : . :
rJMFF030M01- CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
rJMSF023O05- CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
rJMFF023I05- CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
rJMSF042L10- CCTCTCATCCTCGGCTTCNCANTGTCNGTCAAGCCNNGAANATCACTCTCACCCTTTTTC
JMFN012N22+ CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
rJMSF043E12- CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
rJMFF022A22- CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
JMFN038L17+ CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
JMFN029F21+ CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
JMFN042G23+ CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
JMFN041D23+ CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
JMFN025B03+ CCTCTCATCCTTGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
rJMSF045N23+ GTCAGTCAAGCCAGGAAGATCACTNTCACCCTTTTTC
JMFF012J24+ CCTCTCATCCTTGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
JMSF043E12+ CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
JMFF012E22+ CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
JMFF023I05+ CATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
JMFF022A22+ CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
JMFF004M20+ CTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
JMSF023O05+ CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
____________________________________________________________
consensus CCTCTCATCCTCGGCTTCTCAATGTCAGTCAAGCCAGGAAGATCACTCTCACCCTTTTTC
. : . : . : . : . : . :
rJMFF030M01- ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
rJMSF023O05- ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
rJMFF023I05- ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
rJMSF042L10- ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACANTGCATCCACGAACTGACTTC
JMFN012N22+ ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
rJMSF043E12- ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
rJMFF022A22- ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
JMFN038L17+ ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
JMFN029F21+ ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
JMFN042G23+ ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
JMFN041D23+ ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
JMFN025B03+ ACAATGACCAAATTCAGAACAGAGAGATCCTGACTGACAATGCATCCACGAACAGACTTC
rJMSF045N23+ ACAATGACCAAATTCAGAACAGAGAGATCNTGAGTGNCANTGCATCCACGAACAGACTTC
JMFF012J24+ ACAATGACCAAATTCAGAACAGAGAGATCCTGACTGACAATGCATCCACGAACAGACTTC
JMSF043E12+ ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
JMFF012E22+ ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
JMFF023I05+ ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
JMFF022A22+ ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
JMFF004M20+ ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
JMSF023O05+ ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
JMFF046A12+ CCAGATTCAGAACAGACAGATCGTGACTGACAATGCATCCACGAACTGACTTC
____________________________________________________________
consensus ACAATCACCAGATTCAGAACAGACAGATCCTGACTGACAATGCATCCACGAACTGACTTC
. : . : . : . : . : . :
rJMFF030M01- CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
rJMSF023O05- CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
rJMFF023I05- CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
rJMSF042L10- CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAG
JMFN012N22+ CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
rJMSF043E12- CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
rJMFF022A22- CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
JMFN038L17+ CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
JMFN029F21+ CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
JMFN042G23+ CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
JMFN041D23+ CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
JMFN025B03+ CTTCTGCGCTCACCATTACGCCTACCATACCCACGGAAACATGGGGTACCACGTTGGAGT
rJMSF045N23+ CTTGTGCGCTCACCATTACNCCTACCATACCCACGGAAACATGGGGTACCACGTNGGAGT
JMFF012J24+ CTTCTGCGCTCACCATTACGCCTACCATACCCACGGAAACATGGGGTACCACGTTGGAGT
JMSF043E12+ CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
JMFF012E22+ CTTCTGCGCTCACCATTATGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
JMSF005J04+ GGAGT
JMFF023I05+ CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
JMFF022A22+ CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
JMFF004M20+ CTTCTGCGCTCACCATTATGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
JMSF023O05+ CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
JMFF046A12+ CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
____________________________________________________________
consensus CTTCTGCGCTCACCATTACGCCTTCCATACCCTCGGAAACATGGAGTACCACGCTGGAGT
. : . : . : . : . : . :
rJMFF030M01- AGAANGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
rJMSF023O05- AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
rJMFF023I05- AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMFN012N22+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
rJMSF043E12- AGAAGGCGAACACGGCCTGGAGTC-AAACTCCCTGTTTCATGGGAAAAACCTTGCTTGTC
rJMFF022A22- AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMFN038L17+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMFN029F21+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMFN042G23+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMFN041D23+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMFN025B03+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCTTGTTTCATGGG-AAAACCTTGTTTGTC
rJMSF045N23+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCTTGTTTCATGGG-AAAACCTTGTNTGTC
JMFF012J24+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCTTGTTTCATGGG-AAAACCTTGTTTGTC
JMSF043E12+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMFF012E22+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMSF005J04+ AGAAGGCGAACACGGCCNGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMFF023I05+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMFF022A22+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMFF004M20+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMSF023O05+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
JMFF046A12+ AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
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consensus AGAAGGCGAACACGGCCTGGAGTCAAAACTCCCTGTTTCATGGG-AAAACCTTGCTTGTC
. : . : . : . : . : . :
rJMFF030M01- ACAGCCACCCATAATCTTGAACACATATCCC
rJMSF023O05- ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCC
rJMFF023I05- ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCC
JMFN012N22+ ACAGCCACCCATAA
rJMSF043E12- ACAGCCACCCATAATCTTGAACACATATCCC
rJMFF022A22- ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMFN038L17+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMFN029F21+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMFN042G23+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMFN041D23+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMFN025B03+ ACATCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAAGCATCGCCGCT
rJMSF045N23+ ACATCCACCCATAATCTNGAACACATATCCCTTGAACTCATCTCCCAAAGCATCGCCGCT
JMFF012J24+ ACATCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAAGCATCGCCGCT
JMSF043E12+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMFF012E22+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMSF005J04+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMFF023I05+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMFF022A22+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMFF004M20+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMSF023O05+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
JMFF046A12+ ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
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consensus ACAGCCACCCATAATCTTGAACACATATCCCTTGAACTCATCTCCCAAGGCATCGCCGCT
. : . : . : . : . : . :
rJMFF022A22- GACCTCCTGAGAAATCCT-CTTGTCAAAA
JMFN038L17+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
JMFN029F21+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
JMFN042G23+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
JMFN041D23+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
JMFN025B03+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAAGCTCGGAGTTTCTGATCATCGTCGATCT
rJMSF045N23+ GACCTCCTGAGAAATCCTACTTGTCAAAAAAAGCTCGGAGTTTCTGATCATCGTCGATCT
JMFF012J24+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAAGCTCGGAGTTTCTGATCATCGTCGATCT
JMSF043E12+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
JMFF012E22+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
JMSF005J04+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
JMFF023I05+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
JMFF022A22+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
JMFF004M20+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
JMSF023O05+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
JMFF046A12+ GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
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consensus GACCTCCTGAGAAATCCT-CTTGTCAAAAAAGGCTCGGAGTTTCTGATCATCGTCGATCT
. : . : . : . : . : . :
JMFN038L17+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
JMFN029F21+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
JMFN042G23+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
JMFN041D23+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
JMFN025B03+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCA
rJMSF045N23+ CGAGCT
JMFF012J24+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCAGCTGCG
JMSF043E12+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
JMFF012E22+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
JMSF005J04+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
JMFF023I05+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
JMFF022A22+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
JMFF004M20+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
JMSF023O05+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCCTCTGCTGCG
JMFF046A12+ CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
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consensus CGAGCTTCTTCTGGCACCCAGTGGTCGGATTTGCGATGTTGAACTTCATCTTCTGCTGCG
. : . : . : . : . : . :
JMFN038L17+ GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAA
JMFN029F21+ GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAA
JMFN042G23+ GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAA
JMFN041D23+ GTACTCGGAGGAGGCAACGACGCAACGGA
JMFF012J24+ GTACTCGGAGGAGGCAACGAAGA
JMSF043E12+ GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAA
JMFF012E22+ GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAACCCTGG
JMSF005J04+ GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAACCC
JMFF023I05+ GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAACCCTGGTC
JMFF022A22+ GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAACCCTGGTC
JMFF004M20+ GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAACCCTGG
JMSF023O05+ GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAACCCTGGTC
JMFF046A12+ GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAACCCTGGTCTGCTCGGTTC
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consensus GTACTCGGAGGAGGCAACGACGCAACGGAGACGATGAAGAAACCCTGGTCTGCTCGGTTC