Contig 012975:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045I22Sequence593012975 (2)emb|CDP12559.1|3e-60unnamed protein product [Coffea canephora]532012975 (2)emb|CDP12559.1|1e-38unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF045I22- AACCCAATAAAATAGTAGCTATTTACCAACAAACATTTACCTTTATACATAGTT
JMFF045I22+ CCAATAAGATAGTAGCTATTTACCAACAAACATTTACCTTTATACATAGTT
                      ____________________________________________________________
consensus AACCCAATAAGATAGTAGCTATTTACCAACAAACATTTACCTTTATACATAGTT
 
. : . : . : . : . : . :
rJMFF045I22- GGATTGGATTGCTGGAATTGAAAAAATTAGCGATATTCATGGGTTTTATTCTGGGCTTCT
JMFF045I22+ GGATTGGATTGCTGGAATTGAAAAAATTAGGCATATTAATGTGTTTTATTCTGGGCTTCT
                      ____________________________________________________________
consensus GGATTGGATTGCTGGAATTGAAAAAATTAGGGATATTCATGTGTTTTATTCTGGGCTTCT
 
. : . : . : . : . : . :
rJMFF045I22- ACCCAACATTTCTAAAAATTTTGCATTCATAAAATTTTGTTTCTAAACAAAAAAACACAA
JMFF045I22+ AGCCAACATTTCTAAAGATTTTGCATTCATAAAATTTTGTTTCTAGACAAAAAAACACAA
                      ____________________________________________________________
consensus AGCCAACATTTCTAAAGATTTTGCATTCATAAAATTTTGTTTCTAGACAAAAAAACACAA
 
. : . : . : . : . : . :
rJMFF045I22- AAATGCCCCCCCACCCCTCAACAGTTGCAACTGTGAAACCCCACAAACCTTACTTCTTCT
JMFF045I22+ AAATGCCGCCGCAGCCCTCAGCAGTTGCAACTGTGAAACCCCACAGACCTTACTTCTTCT
                      ____________________________________________________________
consensus AAATGCCGCCGCAGCCCTCAGCAGTTGCAACTGTGAAACCCCACAGACCTTACTTCTTCT
 
. : . : . : . : . : . :
rJMFF045I22- ACGGCCCCCGGAAACCCCCCCAAAACCGCCCCACCGCCCGGGGGGGCCTCTTCTCCAACC
JMFF045I22+ ACGGTCACCGGAAACCCACCCAGAACCGCCCCACCGTCCGTGGCGGCCTCTTCTCCAACC
                      ____________________________________________________________
consensus ACGGTCCCCGGAAACCCCCCCAGAACCGCCCCACCGTCCGTGGGGGCCTCTTCTCCAACC
 
. : . : . : . : . : . :
rJMFF045I22- GCCAAACCATTAACCCCGCCACCAACGCCCAGCCTACTCCATATGATCCACTCCACTTCC
JMFF045I22+ GCCAGACCATTAACCCCGCCACCAACGCCCAGCCTACTCCATATGATCCACTCGACTTCG
                      ____________________________________________________________
consensus GCCAGACCATTAACCCCGCCACCAACGCCCAGCCTACTCCATATGATCCACTCGACTTCG
 
. : . : . : . : . : . :
rJMFF045I22- ACCCCCGGAAATGGGACCCACATGCACATTCTCGACCCCCCAGAACCCCATCTCAAGAGT
JMFF045I22+ ACCTCCGGAAATGGGACCCGGATGCACATTCTCGACCCGCCAGAGACCCATCTCAAGAGT
                      ____________________________________________________________
consensus ACCTCCGGAAATGGGACCCGGATGCACATTCTCGACCCGCCAGAGCCCCATCTCAAGAGT
 
. : . : . : . : . : . :
rJMFF045I22- TCTTCTCTGGGGCAAAAACTCTCTCCCCCATTGCTAGGAATATTGTTGACTCCTTCAAAA
JMFF045I22+ TCTTCTCTGTGGCAAAGACTCTCTCCCCCATTGCTAGGTATATTGTTGACTCCTTCAGAA
                      ____________________________________________________________
consensus TCTTCTCTGTGGCAAAGACTCTCTCCCCCATTGCTAGGTATATTGTTGACTCCTTCAGAA
 
. : . : . : . : . : . :
rJMFF045I22- AGCATGGCCGCTGGGGCCCACTGGTGGCCAAAAACCTGAATCCCCTTCCCCGGGTTAC
JMFF045I22+ AGCATGGCCGCTGGGGCCCACTGGTGGTCGAAGACCTGAATCGCCTTCGCCGGGTTACTC
                      ____________________________________________________________
consensus AGCATGGCCGCTGGGGCCCACTGGTGGTCGAAGACCTGAATCGCCTTCGCCGGGTTACTC
 
. : . : . : . : . : . :
JMFF045I22+ CCAAACTTGTGACTGAGATTCTGTAGATCCCAAATATTGACCCAAGGCTCTCCTCCAAGT
                      ____________________________________________________________
consensus CCAAACTTGTGACTGAGATTCTGTAGATCCCAAATATTGACCCAAGGCTCTCCTCCAAGT