Contig 012965:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044B05Sequence630012965 (2)ref|XP_007207486.1|1e-31hypothetical protein PRUPE_ppa013265mg [Prunus persica] ref|XP_008236698.1| PRED619012965 (2)gb|KJB40327.1|1e-10hypothetical protein B456_007G057900 [Gossypium raimondii]

Alignment

This contig is upended


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rJMFF044B05- ACCCTGGAGAGTTTTTTTTTTTTTTTTCGAACACTGAA
                      ____________________________________________________________
consensus ACCCTGGAGAGTTTTTTTTTTTTTTTTCGAACACTGAA
 
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rJMFF044B05- TCAAATGTCTGCATTAATTGTTTTCTTAAAAAGAACAAATTCGTATATACNAATAAGAAA
                      ____________________________________________________________
consensus TCAAATGTCTGCATTAATTGTTTTCTTAAAAAGAACAAATTCGTATATACNAATAAGAAA
 
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rJMFF044B05- AAGAAGAAAGACXXXXXXXXXXXXXXXXXXXXXXXXXGACTACCTCTTGGTGAAGTGAAC
                      ____________________________________________________________
consensus AAGAAGAAAGACNNNNNNNNNNNNNNNNNNNNNNNNNGACTACCTCTTGGTGAAGTGAAC
 
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rJMFF044B05- GGTCAGCTTCCGACAGTGAAATACCGAAATCTTTCGCCGTATCCTCGAGAATCAACAACG
                      ____________________________________________________________
consensus GGTCAGCTTCCGACAGTGAAATACCGAAATCTTTCGCCGTATCCTCGAGAATCAACAACG
 
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rJMFF044B05- ATGAGACCTGTCTGTTCCGATTCCGGCGAAAGAAGGGAATTTTCCGATTCCCAATTGCGT
                      ____________________________________________________________
consensus ATGAGACCTGTCTGTTCCGATTCCGGCGAAAGAAGGGAATTTTCCGATTCCCAATTGCGT
 
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rJMFF044B05- GTTCCGGTTGCCGGTCTAAAAAAACGGCACCGCTTCAGGTCCCCGGAAAGGTTTCGGCGG
JMFF044B05+ CGCTTCAGGTCNCCGGAGAGGTTTCGGCGG
                      ____________________________________________________________
consensus GTTCCGGTTGCCGGTCTAAAAAAACGGCACCGCTTCAGGTCCCCGGAGAGGTTTCGGCGG
 
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rJMFF044B05- CGGAGGCGGAGGCTTCTGCACCTCCACAACGATCCTCTCCTCCCGCCGCGGTTGACAGGG
JMFF044B05+ CGGAGGCGGAGGCTTCTGCACCTCCACAACGATCCTCTCCTCCCGCCGCGGCTGACAGGG
                      ____________________________________________________________
consensus CGGAGGCGGAGGCTTCTGCACCTCCACAACGATCCTCTCCTCCCGCCGCGGTTGACAGGG
 
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rJMFF044B05- ACACGGCAATGCCAAGAACCTGGGCACATGTTCGCCCGGCATTACCACCGGCAAAGTCAA
JMFF044B05+ ACACGGCAATGCCAAGAACCTGGGCACATGTTCGCCCGGCATTACCACCGGCAAAGTCAA
                      ____________________________________________________________
consensus ACACGGCAATGCCAAGAACCTGGGCACATGTTCGCCCGGCATTACCACCGGCAAAGTCAA
 
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rJMFF044B05- GCTCTGATTTTGCTTCAAATCCTGCAAAGTGAAACAAAACAAACCAATTTTAATCATTTC
JMFF044B05+ GCTCTGATTTTGCTTCAAATCCTGCAAAGTGAAACAAAACAAACCAATTTTAATCATTTC
                      ____________________________________________________________
consensus GCTCTGATTTTGCTTCAAATCCTGCAAAGTGAAACAAAACAAACCAATTTTAATCATTTC
 
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rJMFF044B05- CCATAAACAAATCACTAATTTTGGTTCTGTGCGGCTATATCGGAGAGGGAATTGTTACCG
JMFF044B05+ CCATAAACAAATCACTAATTTTGGTTCTGTGCGGCTATATCGGAGAGGGAATTGTTACCG
                      ____________________________________________________________
consensus CCATAAACAAATCACTAATTTTGGTTCTGTGCGGCTATATCGGAGAGGGAATTGTTACCG
 
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rJMFF044B05- GTTGTGCGAGTACAGGCTTGCGGGGCCCATCATCACCGTCG
JMFF044B05+ GTTGTGCGAGTACAGGCTTGCGGGGCCCATCATCACCGTCGGCGGGCGAGCCGTCGGCGA
                      ____________________________________________________________
consensus GTTGTGCGAGTACAGGCTTGCGGGGCCCATCATCACCGTCGGCGGGCGAGCCGTCGGCGA
 
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JMFF044B05+ AAGACCGACGGAGGGATCGGAGCTTGTCCCAGTGGTAACAGCAGGAGAATACGCCGCTCA
                      ____________________________________________________________
consensus AAGACCGACGGAGGGATCGGAGCTTGTCCCAGTGGTAACAGCAGGAGAATACGCCGCTCA
 
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JMFF044B05+ AGGTGAAGATGACGATCAAGAGCAGCGCGGTGCCGAGAGGGAAGCCCAGTGACGGCCGAG
                      ____________________________________________________________
consensus AGGTGAAGATGACGATCAAGAGCAGCGCGGTGCCGAGAGGGAAGCCCAGTGACGGCCGAG
 
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JMFF044B05+ ACGCATCCACATGCGGCGGCGCTGAATATGGACTCTCCATCGCTTCTATCCCAACAACAA
                      ____________________________________________________________
consensus ACGCATCCACATGCGGCGGCGCTGAATATGGACTCTCCATCGCTTCTATCCCAACAACAA
 
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JMFF044B05+ TTCCTTATATTTCCCGATACCCCTTCTTCTTCCCTCATCCAAAGGGCTCAGAAAACAGAA
                      ____________________________________________________________
consensus TTCCTTATATTTCCCGATACCCCTTCTTCTTCCCTCATCCAAAGGGCTCAGAAAACAGAA
 
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JMFF044B05+ AAATTAAAATAACTGAAATTGCTTCTGCAGAAAACGGAGATAAGGAAGCTTGGAAATGGC
                      ____________________________________________________________
consensus AAATTAAAATAACTGAAATTGCTTCTGCAGAAAACGGAGATAAGGAAGCTTGGAAATGGC