| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006A24 | Sequence | 550 | 012963 (17) | ref|XP_004241917.1| | 2e-88 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| | 764 | 012963 (17) | ref|XP_004241917.1| | 1e-120 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| |
| JMFF017A08 | Sequence | 546 | 012963 (17) | ref|XP_004241917.1| | 1e-88 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| | 736 | 012963 (17) | ref|XP_004241917.1| | 1e-120 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| |
| JMFF030D18 | Sequence | 651 | 012963 (17) | emb|CDP10996.1| | 7e-87 | unnamed protein product [Coffea canephora] | |||||
| JMFF043P21 | Sequence | 621 | 012963 (17) | ref|XP_004241917.1| | 7e-105 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| | 654 | 012963 (17) | emb|CDP10996.1| | 3e-85 | unnamed protein product [Coffea canephora] |
| JMFN038B02 | Sequence | 577 | 012963 (17) | ref|XP_004241917.1| | 7e-106 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| | |||||
| JMSF008F08 | Sequence | 294 | 012963 (17) | gb|ADA67930.1| | 3e-29 | putative 60S ribosomal protein L15 [Wolffia arrhiza] | 742 | 005609 (5) | ref|XP_009625183.1| | 325 | PREDICTED: uncharacterized protein LOC104116092 [Nicotiana tomentosiformis] |
| JMSF026H01 | Sequence | 629 | 012963 (17) | ref|XP_004241917.1| | 7e-112 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| | 737 | 012963 (17) | ref|XP_004241917.1| | 2e-119 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| |
| JMSF036D08 | Sequence | 699 | 012963 (17) | ref|XP_004241917.1| | 5e-120 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| | 726 | 012963 (17) | ref|XP_004241917.1| | 8e-119 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| |
| JMSF036K08 | Sequence | 686 | 012963 (17) | ref|XP_004241917.1| | 4e-120 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| | 768 | 012963 (17) | emb|CDP10996.1| | 4e-104 | unnamed protein product [Coffea canephora] |
| JMSF052F16 | Sequence | 685 | 012963 (17) | ref|XP_004241917.1| | 7e-121 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| | 785 | 012963 (17) | ref|XP_004241917.1| | 2e-120 | PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum] ref|XP_006355022.1| |
This contig is upended
. : . : . : . : . : . :
rJMFF043P21- CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTAGTGAAAA
____________________________________________________________
consensus CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTAGTGAAAA
. : . : . : . : . : . :
rJMFF043P21- CGCAACTCAATTCAAAACGCAACAACAAAAGACAAGTGATATTTTAACTTTAAAACAACA
rJMFF030D18- AAACAACA
rJMSF036K08- AAAGACAAGTGATATTTTAACTTT-AAACAACA
____________________________________________________________
consensus CGCAACTCAATTCAAAACGCAACAACAAAAGACAAGTGATATTTTAACTTTAAAACAACA
. : . : . : . : . : . :
rJMFF043P21- ATGGACTGATTTTCGGTGATGTCTTAGGTATCTAATATCTTGGGTGAAAAACAGACAAAA
rJMFF030D18- ATGGACTGATTTTCGGTGATGTCTTAGGTATCTAATATCTTGGGTGAAAAACAGACAAAA
rJMSF036K08- ATGGACTGATTTTCGGTGATGTCTTAGGTATCTAATATCTTGGGTGAAAAACAGACAAAA
rJMSF026H01- TATCTTGGGTGAAAAACAGACAAAA
rJMFF006A24- TATCTTGGGTGAAAAACAGACAAAA
rJMSF036D08- AATATCTTGGGTGAAAAACAGACAAAA
rJMSF052F16- TATCTAATATCTTGGGTGAAAAACAGACAAAA
____________________________________________________________
consensus ATGGACTGATTTTCGGTGATGTCTTAGGTATCTAATATCTTGGGTGAAAAACAGACAAAA
. : . : . : . : . : . :
rJMFF043P21- ATATAGTCTTGAGCTCTCCAAAACAGTGAACAATTCCCATCATAGCAAAACAAGGCAAAG
rJMFF030D18- ATATAGTCTTGAGCTCTCCAAAACAGTGAACAATTCCCATCATAGCAAAACAAGGCAAAG
rJMSF036K08- ATATAGTCTTGAGCTCTCCAAAACAGTGAACAATTCCCATCATAGCAAAACAAGGCAAAG
rJMSF026H01- ATATAGTCTTGAGCTCTCCAAAACAGTGAACAATTCCCATCATAGCAAAACAAGGCAAAG
rJMFF006A24- ATATAGTCTTGAGCTCTCCAAAACAGTGAACAATTCCCATCATAGCAAAACAAGGCAAAG
rJMFF017A08- AGTCTTGAGCTCTCCAAAACAGTGAACAATTCCCATCATAGCAAAACAAGGCAAAG
rJMSF036D08- ATATAGTCTTGAGCTCTCCAAAACAGTGAACAATTCCCATCATAGCAAAACAAGGCAAAG
rJMSF052F16- ATATAGTCTTGAGCTCTCCAAAACAGTGAACAATTCCCATCATAGCAAAACAAGGCAAAG
JMSF036D08+ AAG
____________________________________________________________
consensus ATATAGTCTTGAGCTCTCCAAAACAGTGAACAATTCCCATCATAGCAAAACAAGGCAAAG
. : . : . : . : . : . :
rJMFF043P21- AAACAAAAACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
rJMFF030D18- AAACAAAAACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
rJMSF036K08- AAACAAAAACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
rJMSF026H01- AAACAAAAACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
rJMFF006A24- AAACAAAAACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
rJMFF017A08- AAACAAAAACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
rJMSF036D08- AAACAAAAACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
rJMSF052F16- AAACAAAAACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
JMSF052F16+ ACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
JMSF036K08+ AACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
JMSF036D08+ AAACAAAAACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
____________________________________________________________
consensus AAACAAAAACTCCAAAACAGTATCTAACATTAACGGTAGCGGCGGAGGGAGAGTGTCTGG
. : . : . : . : . : . :
rJMFF043P21- TTCCTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
rJMFF030D18- TTCCTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
rJMSF036K08- TTCCTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
rJMSF026H01- TTCCTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
JMFN038B02+ GGCTTTGTGGTGCAAGTGTCNCCTTCCT
rJMFF006A24- TTCCTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
rJMFF017A08- TTCCTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
rJMSF036D08- TTCCTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
rJMSF052F16- TTCCTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
JMSF052F16+ TTCCTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
JMSF036K08+ TTCNTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
JMSF026H01+ TCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
JMSF036D08+ TTCNTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
JMFF043P21+ GTGGTGCAAGTGTCCCCTTCCT
____________________________________________________________
consensus TTCCTCTTCCAGGTTGCCCTTCTTGAAGGTCGGGCTTTGTGGTGCAAGTGTCCCCTTCCT
. : . : . : . : . : . :
rJMFF043P21- CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
rJMFF030D18- CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
rJMSF036K08- CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
rJMSF026H01- CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
JMFN038B02+ CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
rJMFF006A24- CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
rJMFF017A08- CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
rJMSF036D08- CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
rJMSF052F16- CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
JMSF052F16+ CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
JMSF036K08+ CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
JMSF026H01+ CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
JMFF017A08+ CGAAGCTTCTCTGTGCTTGTG
JMFF006A24+ GCCGAGGTCAGACCACGAAGCTTCTCTGTGCTTGTG
JMSF036D08+ CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
JMFF043P21+ CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
____________________________________________________________
consensus CGGAGACCCCTGAACTTCTTCCCAGCCGAGGTCAGACCACGAAGC-TCTCTGTGCTTGTG
. : . : . : . : . : . :
rJMFF043P21- TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
rJMFF030D18- TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
rJMSF036K08- TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
rJMSF026H01- TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCTGATTGCAGCGTGGGCAGGATC
JMFN038B02+ TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
rJMFF006A24- TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
rJMFF017A08- TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
rJMSF036D08- TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
rJMSF052F16- TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
JMSF052F16+ TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
JMSF036K08+ TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
JMSF026H01+ TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCTGATTGCAGCGTGGGCAGGATC
JMFF017A08+ TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
JMFF006A24+ TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
JMSF036D08+ TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
JMFF043P21+ TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
____________________________________________________________
consensus TACAGGGTTGCAGAGCCAGTTGATCCTAGGGTCGTTGCGGATTGCAGCGTGGGCAGGATC
. : . : . : . : . : . :
rJMFF043P21- AACCAATATTACCTCANAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
rJMFF030D18- AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
rJMSF036K08- AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
rJMSF026H01- AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
JMFN038B02+ AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
rJMFF006A24- AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
rJMFF017A08- AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
rJMSF036D08- AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
rJMSF052F16- AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
JMSF052F16+ AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
JMSF036K08+ AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
JMSF026H01+ AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
JMFF017A08+ AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
JMFF006A24+ AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
JMSF036D08+ AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
JMFF043P21+ AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
____________________________________________________________
consensus AACCAATATTACCTCAAAGTACTTGTAGGTGGAATCCTCGTTAATCCAGTAAGAGTTCAA
. : . : . : . : . : . :
rJMFF043P21- AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
rJMFF030D18- AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
rJMSF036K08- AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
rJMSF026H01- AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
JMFN038B02+ AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
rJMFF006A24- AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
rJMFF017A08- AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
rJMSF036D08- AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
rJMSF052F16- AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
JMSF052F16+ AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
JMSF036K08+ AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
JMSF026H01+ AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
JMFF017A08+ AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
JMFF006A24+ AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
JMSF036D08+ AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
JMFF043P21+ AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
____________________________________________________________
consensus AACCCTGAGGCCACCGAGTTTCCTGCCAGCACGCTCCTCAGCAACTGAGCGTTTGCTCCG
. : . : . : . : . : . :
rJMFF043P21- CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
rJMFF030D18- CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
rJMSF036K08- CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
rJMSF026H01- CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATGAACAATACCCTTGGG
JMFN038B02+ CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
rJMFF006A24- CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
rJMFF017A08- CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
rJMSF036D08- CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
rJMSF052F16- CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
JMSF052F16+ CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
JMSF036K08+ CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
JMSF026H01+ CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATGAACAATACCCTTGGG
JMFF017A08+ CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
JMFF006A24+ CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
JMSF036D08+ CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
JMSF008F08+ CCATAAACAATACCCTTGGG
JMFF043P21+ CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
____________________________________________________________
consensus CTGAAATTTCAGCTGAGTCACACCCTGGTTTGTGGGCTTGCCATAAACAATACCCTTGGG
. : . : . : . : . : . :
rJMFF043P21- AACGGG
rJMFF030D18- AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
rJMSF036K08- AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
rJMSF026H01- AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
JMFN038B02+ AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
rJMFF006A24- AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
rJMFF017A08- AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
rJMSF036D08- AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
rJMSF052F16- AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
JMSF052F16+ AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
JMSF036K08+ AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
JMSF026H01+ AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
JMFF017A08+ AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
JMFF006A24+ AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
JMSF036D08+ AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
JMSF008F08+ AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
JMFF043P21+ AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
____________________________________________________________
consensus AACGGGACGCTTTCTACCCCCACGTCTCACACGAACTCTATAGATGACATATCCCTGCTT
. : . : . : . : . : . :
rJMFF030D18- AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGG
rJMSF036K08- AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
rJMSF026H01- AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
JMFN038B02+ AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
rJMFF006A24- AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
rJMFF017A08- AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
rJMSF036D08- AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
rJMSF052F16- AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
JMSF052F16+ AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
JMSF036K08+ AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
JMSF026H01+ AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
JMFF017A08+ AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
JMFF006A24+ AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
JMSF036D08+ AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
JMSF008F08+ AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
JMFF043P21+ AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
____________________________________________________________
consensus AGCCTTGTAGCCAAGGCGACGAGCCTTGTCGGGACGAGTGGACCTGGTGACGCGAACTAT
. : . : . : . : . : . :
rJMSF036K08- GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGC-AAAACCTCATCACATCCGA
rJMSF026H01- GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
JMFN038B02+ GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
rJMFF006A24- GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
rJMFF017A08- GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
rJMSF036D08- GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
rJMSF052F16- GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
JMSF052F16+ GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
JMSF036K08+ GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
JMSF026H01+ GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
JMFF017A08+ GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
JMFF006A24+ GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
JMSF036D08+ GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
JMSF008F08+ GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
JMFF043P21+ GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
____________________________________________________________
consensus GGAAGGAAGCTGGCGGTACTCCCAGCACCTCACCCTCAGCAAAAACCTCATCACATCCGA
. : . : . : . : . : . :
rJMSF036K08- TTGCTTCTT
rJMSF026H01- TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATT
JMFN038B02+ TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
rJMFF006A24- TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
rJMFF017A08- TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAAA
rJMSF036D08- TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCA
rJMSF052F16- TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
JMSF052F16+ TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
JMSF036K08+ TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
JMSF026H01+ TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
JMFF017A08+ TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
JMFF006A24+ TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
JMSF036D08+ TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
JMSF008F08+ TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
JMFF043P21+ TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
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consensus TTGCTTCTTCCTCCATAGCTCCGATACGTATGTGTACGCACCCATCGCAAATTGCGGAGA
. : . : . : . : . : . :
JMFN038B02+ CGATCTGCTC
rJMFF006A24- CGATCTGCTCCCTGCTGGTA
rJMFF017A08- CGATCTGCTCCCTGCTGGTAT
rJMSF052F16- CGATCTGCTCCCTGCTGGTATCCTCGGCTAGTCC
JMSF052F16+ CGATCTGCTCCCTGCTGGTATCCTCGGCTAGTCC
JMSF036K08+ CGATCTGCTCCCTGCTGGTATCCTCGGCTAGTCC
JMSF026H01+ CGATCTGCTCCCTGCTGGTATCCTCGGCTAG
JMFF017A08+ CGATCTGCTCCCTGCTGGTATCCTCGGCT
JMFF006A24+ CGATCTGCTCCCTGCTGGTATCCTCGGCTAGTC
JMSF036D08+ CGATCTGCTCCCTGCTGGTATCCTCGGCTAGTCC
JMSF008F08+ CGATCTGCTCCCTGCTGGTATCCTCGGCTAGTCC
JMFF043P21+ CGATCTGCTCCCTGCTGGTATCCTCGGCTAGTCGGCTGAAGGAAAGAGCTGTGAGCGCAT
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consensus CGATCTGCTCCCTGCTGGTATCCTCGGCTAGTCCGCTGAAGGAAAGAGCTGTGAGCGCAT