Contig 012960:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043K16Sequence655012960 (2)gb|KDP28205.1|2e-48hypothetical protein JCGZ_13976 [Jatropha curcas]607012960 (2)gb|KDP28205.1|1e-48hypothetical protein JCGZ_13976 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF043K16- GCAATAAAACTGCCATCTTGTGAGAATCTATACACTCAGTTTTAGTGAATACTGCCATA
JMFF043K16+ TAAAACTGCCATCTTGTGAGAATCTATACACTCAGTTTTAGTGAATACTGCCATA
                      ____________________________________________________________
consensus GCAATAAAACTGCCATCTTGTGAGAATCTATACACTCAGTTTTAGTGAATACTGCCATA
 
. : . : . : . : . : . :
rJMFF043K16- TTATATATTATTACAATTATGCAATATTTATAGGCAAAAACTGCATAAAAATCCAACTGG
JMFF043K16+ TTATATATTATTACAATTATGCAATATTTATAGGCAAAAACTGCATAAAAATCCAACTGG
                      ____________________________________________________________
consensus TTATATATTATTACAATTATGCAATATTTATAGGCAAAAACTGCATAAAAATCCAACTGG
 
. : . : . : . : . : . :
rJMFF043K16- AATCTCAGATGAATTGAAGCATCATGACAGTATAAAATGTGTTCTTTCTGCTGTTTCCTG
JMFF043K16+ AATCTCAGATGAATTGAAGCATCATGACAGTATAAAATGTGTTCTTTCTGCTGTTTCCTG
                      ____________________________________________________________
consensus AATCTCAGATGAATTGAAGCATCATGACAGTATAAAATGTGTTCTTTCTGCTGTTTCCTG
 
. : . : . : . : . : . :
rJMFF043K16- GCTTTCTTGATTGAATCTTTCAGCCCCTTCCATCATCTCCTGCAACATGTTCTGTAGATC
JMFF043K16+ GCTTTCTTGATTGAATCTTTCAGCCCCTTCCATCATCTCCTGCAACATGTTCTGTAGATC
                      ____________________________________________________________
consensus GCTTTCTTGATTGAATCTTTCAGCCCCTTCCATCATCTCCTGCAACATGTTCTGTAGATC
 
. : . : . : . : . : . :
rJMFF043K16- CTCCAAACTACTTGCAGCCTGAGACTTCTCCTTTTCCATCATGGCCACCATTTCTTGCAT
JMFF043K16+ CTCCAAACTACTTGCAGCCTGAGACTTCTCCTTTTCCATCATGGCCACCATTTCTTGCAT
                      ____________________________________________________________
consensus CTCCAAACTACTTGCAGCCTGAGACTTCTCCTTTTCCATCATGGCCACCATTTCTTGCAT
 
. : . : . : . : . : . :
rJMFF043K16- GAACCCACAAAATTCTTTATCATCACTGTTATCTGCCAACAGGTCAAGTAACCCAGCATC
JMFF043K16+ GAACCCACAAAATTCTTTATCATCACTGTTATCTGCCAACAGGTCAAGTAACCCAGCATC
                      ____________________________________________________________
consensus GAACCCACAAAATTCTTTATCATCACTGTTATCTGCCAACAGGTCAAGTAACCCAGCATC
 
. : . : . : . : . : . :
rJMFF043K16- ATAGACTGATCTCTTCCCTTTGTCAGACAGAACAGAATAAGCTTCTTGAATTTGCAGAAA
JMFF043K16+ ATAGACTGATCTCTTCCCTTTGTCAGACAGAACAGAATAAGCTTCTTGAATTTGCAGAAA
                      ____________________________________________________________
consensus ATAGACTGATCTCTTCCCTTTGTCAGACAGAACAGAATAAGCTTCTTGAATTTGCAGAAA
 
. : . : . : . : . : . :
rJMFF043K16- TTTATGTTTTGCTTGTCCAACAATTGCAGGGTCTTTCACACATCTATCTGGGTGCCATTT
JMFF043K16+ TTTATGTTTTGCTTGTCCAACAATTGCAGGGTCTTTCACACATCTATCTGGGTGCCATTT
                      ____________________________________________________________
consensus TTTATGTTTTGCTTGTCCAACAATTGCAGGGTCTTTCACACATCTATCTGGGTGCCATTT
 
. : . : . : . : . : . :
rJMFF043K16- CAGAGCAAGTTTCCTGTAAGCCCCTCGGATTTGAGCATCTGAAGCTTGTTTACAGATTCC
JMFF043K16+ CAGAGCAAGTTTCCTGTAAGCCCCTCGGATTTGAGCATCTGAAGCTTGTTTACAGATTCC
                      ____________________________________________________________
consensus CAGAGCAAGTTTCCTGTAAGCCCCTCGGATTTGAGCATCTGAAGCTTGTTTACAGATTCC
 
. : . : . : . : . : . :
rJMFF043K16- AAGCACAGAATAATAACAAGATTCTCCGTTGGAACGCACTAACTCCATGTATTATTACTA
JMFF043K16+ AAGCACAGAATAATAACAAGATTCTCCGTTGGAACGCACTAACTCCATGTATTATTACTA
                      ____________________________________________________________
consensus AAGCACAGAATAATAACAAGATTCTCCGTTGGAACGCACTAACTCCATGTATTATTACTA
 
. : . : . : . : . : . :
rJMFF043K16- CNATTCCC
JMFF043K16+ CAATTCCCAGAAAATTTCAGCAAGAAGCATGCAGTACTGAGGAAGCAGGGTTTGTGTTGT
                      ____________________________________________________________
consensus CAATTCCCAGAAAATTTCAGCAAGAAGCATGCAGTACTGAGGAAGCAGGGTTTGTGTTGT