Contig 012959:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034J06Sequence501012959 (4)ref|XP_006360824.1|136PREDICTED: uncharacterized protein LOC102590367 [Solanum tuberosum]790013834 (4)ref|XP_009615562.1|379PREDICTED: uncharacterized protein LOC104108275 [Nicotiana tomentosiformis]
JMFF043K04Sequence640012959 (4)ref|XP_006360824.1|136PREDICTED: uncharacterized protein LOC102590367 [Solanum tuberosum]604013834 (4)ref|XP_009615562.1|258PREDICTED: uncharacterized protein LOC104108275 [Nicotiana tomentosiformis]
JMFF046P07Sequence582012959 (4)ref|XP_006360824.1|179PREDICTED: uncharacterized protein LOC102590367 [Solanum tuberosum]481013834 (4)gb|EYU41971.1|2e-57hypothetical protein MIMGU_mgv1a027046mg [Erythranthe guttata]
JMSF016D13Sequence372012959 (4)790013834 (4)ref|XP_009615562.1|398PREDICTED: uncharacterized protein LOC104108275 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF046P07+                                                GTATCAACGCAAAGGCCTTCCAA
                      ____________________________________________________________
consensus                                                  GTATCAACGCAAAGGCCTTCCAA
 
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JMFF046P07+           TACGGGTTCAAAAATCCCTCCGCGATCAGATCTGAAACCACGGACGAGTAGAACTTGGCC
                      ____________________________________________________________
consensus             TACGGGTTCAAAAATCCCTCCGCGATCAGATCTGAAACCACGGACGAGTAGAACTTGGCC
 
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JMFF046P07+           GCCTTCTGGAAATCCTTGGTGGCCCAGAGATCGGGGAGCTTGGGTTTCGCCGGGGCCGAC
JMFF034J06+                               GGCCCAGAGATCGGGGAGCTTGGGTTTCGCCGGGGCCGAC
JMFF043K04+                               GGCCCAGAGATCGGGGAGCTTGGGTTTCGCCGGGGCCGAC
                      ____________________________________________________________
consensus             GCCTTCTGGAAATCCTTGGTGGCCCAGAGATCGGGGAGCTTGGGTTTCGCCGGGGCCGAC
 
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JMFF046P07+           TTCCCGACCGCCTCGCTGGTCATAACCGCCGCCGATGGCTTCGTGAGCTGGGTAGTCACG
JMFF034J06+           TTCCCGACCGCCTCGCTGGTCATAACCGCCGCCGATGGCTTCGTGAGCTGGGTAGTCACG
JMFF043K04+           TTCCCGACCGCCTCGCTGGTCATAACCGCCGCCGATGGCTTCGTGAGCTGGGTAGTCACG
                      ____________________________________________________________
consensus             TTCCCGACCGCCTCGCTGGTCATAACCGCCGCCGATGGCTTCGTGAGCTGGGTAGTCACG
 
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JMFF046P07+           GAGACAATGTTGAAATTCTCCGGCAGCGAGAAGAAACAAAAGTCGCCTAGGTCACATGAC
JMFF034J06+           GAGACAATGTTGAAATTCTCCGGCAGCGAGAAGAAACAAAAGTCGCCTAGGTCACATGAC
JMFF043K04+           GAGACAATGTTGAAATTCTCCGGCAGCGAGAAGAAACAAAAGTCGCCTAGGTCACATGAC
                      ____________________________________________________________
consensus             GAGACAATGTTGAAATTCTCCGGCAGCGAGAAGAAACAAAAGTCGCCTAGGTCACATGAC
 
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JMFF046P07+           TCCCCTCGGAGTGTCACAATATAGGCGAACCGAAACCCAATAATGGCAACGCAGAACAAG
JMFF034J06+           TCCCCTCGGAGTGTCACAATATAGGCGAACCGAAACCCAATAATGGCAACGCAGAACAAG
JMFF043K04+           TCCCCTCGGAGTGTCACAATATAGGCGAACCGAAACCCAATAATGGCAACGCAGAACAAG
                      ____________________________________________________________
consensus             TCCCCTCGGAGTGTCACAATATAGGCGAACCGAAACCCAATAATGGCAACGCAGAACAAG
 
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JMFF046P07+           AACACCCGCACCAGTATATTCCTCAGGAAGCTCGACTTCCCGGCGCCGTGATCCATACCG
JMFF034J06+           AACACCCGCACCAGTATATTCCTCAGGAAGCTCGACTTCCCGGCGCCGTGATCCATACCG
JMSF016D13+                                                     GCGCCGTGATCCATACCG
JMFF043K04+           AACACCCGCACCAGTATATTCCTCAGGAAGCTCGACTTCCCGGCGCCGTGATCCATACCG
                      ____________________________________________________________
consensus             AACACCCGCACCAGTATATTCCTCAGGAAGCTCGACTTCCCGGCGCCGTGATCCATACCG
 
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JMFF046P07+           AACAAGATCCTTTTTTTGCGTACACAATCTGTATCTAATGCTTTGCTTGTTCCCGTGTGA
JMFF034J06+           AACAAGATCCTTTTTTTGCGTACACAATCTGTATCTAATGCTTTGCTTGTTCCCGTGTGA
JMSF016D13+           AACAAGATCCTTTTTTTGCGTACACAATCTGTATCTAATGCTTTGCTTGTTCCCGTGTGA
JMFF043K04+           AACAAGATCCTTTTTTTGCGTACACAATCTGTATCTAATGCTTTGCTTGTTCCCGTGTGA
                      ____________________________________________________________
consensus             AACAAGATCCTTTTTTTGCGTACACAATCTGTATCTAATGCTTTGCTTGTTCCCGTGTGA
 
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JMFF046P07+           GAATAAGAAGGAAAGGGTTCAGAGCGAGAGATAGAAAACGCGGTTTATCTCGCGCAGAAT
JMFF034J06+           GAATAAGAAGGAAAGGGTTCAGAGCGAGAGATAGAAAACGCGGTTTATCTCGCGCAGAAT
JMSF016D13+           GAATAAGAAGGAAAGGGTTCAGAGCGAGAGATAGAAAACGCGGTTTATCTCGCGCAGAAT
JMFF043K04+           GAATAAGAAGGAAAGGGTTCAGAGCGAGAGATAGAAAACGCGGTTTATCTCGCGCAGAAT
                      ____________________________________________________________
consensus             GAATAAGAAGGAAAGGGTTCAGAGCGAGAGATAGAAAACGCGGTTTATCTCGCGCAGAAT
 
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JMFF046P07+           CGAGCGGAGGTATGGTTGGCACCCAAGAGAGAGAGATGAGCGATTGGATAAGAAAGAGGT
JMFF034J06+           CGAGCGGAGGTATGGTTGGCACCCAAGAGAGAGAGATGAGCGATTGGATAAGAAAGAGGT
JMSF016D13+           CGAGCGGAGGTATGGTTGGCACCCAAGAGAGAGAGATGAGCGATTGGATAAGAAAGAGGT
JMFF043K04+           CGAGCGGAGGTATGGTTGGCACCCAAGAGAGAGAGATGAGCGATTGGATAAGAAAGAGGT
                      ____________________________________________________________
consensus             CGAGCGGAGGTATGGTTGGCACCCAAGAGAGAGAGATGAGCGATTGGATAAGAAAGAGGT
 
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JMFF046P07+           AAATTGATTTGGAAAAAAC                                         
JMFF034J06+           AAATTGATTTGGAAAAAACGCATGATTTGGTGACGGAAAC                    
JMSF016D13+           AAATTGATTTGGAAAAAACGCATGATTTGGTGACGGAAACAATAATCCGAAGAAGATGGT
JMFF043K04+           AAATTGATTTGGAAAAAACGCATGATTTGGTGACGGAAACAATAATCCGAAGAAGATGGT
                      ____________________________________________________________
consensus             AAATTGATTTGGAAAAAACGCATGATTTGGTGACGGAAACAATAATCCGAAGAAGATGGT
 
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JMSF016D13+           GGCTATGAATAGTGGGCGAAATTCACTCTGCTTGTAGAAAATATTATTCCCACCGGTTTG
JMFF043K04+           GGCTATGAATAGTGGGCGAAATTCACTCTGCTTGTAGAAAATATTATTCCCACCGGTTTG
                      ____________________________________________________________
consensus             GGCTATGAATAGTGGGCGAAATTCACTCTGCTTGTAGAAAATATTATTCCCACCGGTTTG
 
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JMSF016D13+           TTTTCACCATTTTCAGAGTTTTCTAGAGAGAGAGAAAAAAGGAAGAAGATGA        
JMFF043K04+           TTTTCACCATTTTCAGAGTTTTCTAGAGAGAGAGAAAAAAGGAAGAAGATGATGAAGATT
                      ____________________________________________________________
consensus             TTTTCACCATTTTCAGAGTTTTCTAGAGAGAGAGAAAAAAGGAAGAAGATGATGAAGATT