Contig 012958:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF043J08-                                  ACCCTGGAGCGTTTTTTTTTTTTTTTTAGTACTCCG
                      ____________________________________________________________
consensus                                     ACCCTGGAGCGTTTTTTTTTTTTTTTTAGTACTCCG
 
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rJMFF043J08-          ACAATATAAATAAGTTCTTTCAACAACTTGCTGAGAAATTAAATTTACAAGAAAGATTGT
rJMFF026L20-                                              AATTAAATTTACAAGAAAGATTGT
                      ____________________________________________________________
consensus             ACAATATAAATAAGTTCTTTCAACAACTTGCTGAGAAATTAAATTTACAAGAAAGATTGT
 
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rJMFF043J08-          CCATATAGCATGCACAGAGACAAATACCCAGTATTTCGATCATTTTGTGTCTTATATTCC
rJMFF026L20-          CCATATAGCATGCACAGAGACAAATACCCAGTATTTCGATCATTTTGTGTCTTATATTCC
                      ____________________________________________________________
consensus             CCATATAGCATGCACAGAGACAAATACCCAGTATTTCGATCATTTTGTGTCTTATATTCC
 
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rJMFF043J08-          ACACAAGTTTGAAACAACTATATTACACCTAGCTAAGATTGAATTTTGCGTATAAGCCAC
rJMFF026L20-          ACACAAGTTTGAAACAACTATATTACACCTAGCTAAGATTGAATTTTGCGTATAAGCCAC
                      ____________________________________________________________
consensus             ACACAAGTTTGAAACAACTATATTACACCTAGCTAAGATTGAATTTTGCGTATAAGCCAC
 
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rJMFF043J08-          AGCCTGGATTCCTTATTATGGGATGATATAGATTGCAGCCAAAGTTATTAAAAGCTCCAG
rJMFF026L20-          AGCCTGGATTCCTTATTATGGGATGATATAGATTGCAGCCAAAGTTATTAAAAGCTCCAG
                      ____________________________________________________________
consensus             AGCCTGGATTCCTTATTATGGGATGATATAGATTGCAGCCAAAGTTATTAAAAGCTCCAG
 
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rJMFF043J08-          CACAATCCACAAGCTGCTGCTCAGAGAGGGAAATGTTCTTCCCAAATGCCTGGGCATAAG
rJMFF026L20-          CACAATCCACAAGCTGCTGCTCAGAGAGGGAAATGTTCTTCCCAAATGCCTGGGCATAAG
JMFF043J08+                                CAGAGAGGGAAATGTTCTTCCCAAATGCCTGGGCATAAG
                      ____________________________________________________________
consensus             CACAATCCACAAGCTGCTGCTCAGAGAGGGAAATGTTCTTCCCAAATGCCTGGGCATAAG
 
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rJMFF043J08-          CTGCTTCTAGGGCTCCAGTGGTGCTGAATGTCCAACAAGATCCACAACTGCCTTGATTCT
rJMFF026L20-          CTGCTTCTAGGGCTCCAGTGGTGCTGAATGTCCAACAAGATCCACAACTGCCTTGATTCT
JMFF026L20+                                                                    TCT
JMFF043J08+           CTGCTTCTAGGGCTCCAGTGGTGCTGAATGTCCAACAAGATCCACAACTGCCTTGATTCT
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consensus             CTGCTTCTAGGGCTCCAGTGGTGCTGAATGTCCAACAAGATCCACAACTGCCTTGATTCT
 
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rJMFF043J08-          TGACAGCGCTAACTATTCCAGCCTCCCTCCAGTCTTTAGTCTCAGGGACGTTGGAATTTG
rJMFF026L20-          TGACAGCGCTAACTATTCCAGCCTCCCTCCAGTCTTTAGTCTCAGGGACGTTGGAATTTG
JMFF026L20+           TGACAGCGCTAACTATTCCAGCCTCCCTCCAGTCTTTAGTCTCAGGGACGTTGGAATTTG
JMFF043J08+           TGACAGCGCTAACTATTCCAGCCTCCCTCCAGTCTTTAGTCTCAGGGACGTTGGAATTTG
                      ____________________________________________________________
consensus             TGACAGCGCTAACTATTCCAGCCTCCCTCCAGTCTTTAGTCTCAGGGACGTTGGAATTTG
 
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rJMFF043J08-          AGCGCTTGAGACTGCCCTTTAATGTAGCAGAGCAGTTTTGAGCAGCTCCCAGCCTATGCT
rJMFF026L20-          AGCGCTTGAGACTGCCCTTTAATGTAGCAGAGCAGTTTTGAGCAGCTCCCAGCCTATGCT
JMFF026L20+           AGCGCTTGAGACTGCCCTTTAATGTAGCAGAGCAGTTTTGAGCAGCTCCCAGCCTATGCT
JMFF043J08+           AGCGCTTGAGACTGCCCTTTAATGTAGCAGAGCAGTTTTGAGCAGCTCCCAGCCTATGCT
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consensus             AGCGCTTGAGACTGCCCTTTAATGTAGCAGAGCAGTTTTGAGCAGCTCCCAGCCTATGCT
 
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rJMFF043J08-          TTTGGAACTCATTCCATGTCATGTCAGCAAACTCATTAAGACCAAGC-TTGTATGGAAGT
rJMFF026L20-          TTTGGAACTCATTCCATGTCATGTCAGCAAACTCATTAAGACCAAGCTTTGTATGGAAGT
JMFF026L20+           TTTGGAACTCATTCCATGTCATGTCAGCAAACTCATTAAGACCAAGC-TTGTATGGAAGT
JMFF043J08+           TTTGGAACTCATTCCATGTCATGTCAGCAAACTCATTAAGACCAAGC-TTGTATGGAAGT
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consensus             TTTGGAACTCATTCCATGTCATGTCAGCAAACTCATTAAGACCAAGC-TTGTATGGAAGT
 
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rJMFF043J08-          CCTTTCTTGTTATGAGATCTAATCATCTTCAAACTCTCCTTAAACACACCAAACCGC   
rJMFF026L20-          CCTTTCTTGTTATGAGATCTAATCATCTTCAAACTCTCCTTAAACACACCAAACCGCCGA
JMFF026L20+           CCTTTCTTGTTATGAGATCTAATCATCTTCAAACTCTCCTTAAACACACCAAACCGCCGA
JMFF043J08+           CCTTTCTTGTTATGAGATCTAATCATCTTCAAACTCTCCTTAAACACACCAAACCGCCGA
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consensus             CCTTTCTTGTTATGAGATCTAATCATCTTCAAACTCTCCTTAAACACACCAAACCGCCGA
 
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rJMFF026L20-          TTAATCTCCTCAGCACTCTCATATCTCTTCCCGTATTTGTGAGCGAAGCGAGTGAAGCAG
JMFF026L20+           TTAATCTCCTCAGCACTCTCATATCTCTTCCCGTATTTGTGAGCGAAGCGAGTGAAGCAG
JMFF043J08+           TTAATCTCCTCAGCACTCTCATATCTCTTCCCGTATTTGTGAGCGAAGCGAGTGAAGCAG
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consensus             TTAATCTCCTCAGCACTCTCATATCTCTTCCCGTATTTGTGAGCGAAGCGAGTGAAGCAG
 
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rJMFF026L20-          TGAGCATGACGAGTGGAGCCGATGACTTGGAGAATCGAGCTCTCCAGCTCATGTAAGCCG
JMFF026L20+           TGAGCATGACGAGTGGAGCCGATGACTTGGAGAATCGAGCTCTCCAGCTCATGTAAGCCG
JMFF043J08+           TGAGCATGACGAGTGGAGCCGATGACTTGGAGAATCGAGCTCTCCAGCTCATGTAAGCCG
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consensus             TGAGCATGACGAGTGGAGCCGATGACTTGGAGAATCGAGCTCTCCAGCTCATGTAAGCCG
 
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rJMFF026L20-          TCCGATACGACTTGCCTGATCGGATTATCATCAGTGAA                      
JMFF026L20+           TCCGATACGACTTGCCTGATCGGATTATCATCAGTGAAGGCCTTCGATCCGGCGACAGAG
JMFF043J08+           TCCGATACGACTTGCCTGATCGGATTATCATCAGTGAAGGCCTTCGATCCGGCGACAGAG
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consensus             TCCGATACGACTTGCCTGATCGGATTATCATCAGTGAAGGCCTTCGATCCGGCGACAGAG
 
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JMFF026L20+           GCGATCACGGCCGAAATCACGAAGAGGAAGACTGAGAGACGCGCCATTGTTGTCCTCTCC
JMFF043J08+           GCGATCACGGCCGAAATCACGAAGAGGAAGACTGAGAGACGCGCCATTGTTGTCCTCTCC
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consensus             GCGATCACGGCCGAAATCACGAAGAGGAAGACTGAGAGACGCGCCATTGTTGTCCTCTCC
 
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JMFF026L20+           TTGGAAAAGTAAAATGAGCGAGGAAAGAGCGGATCGGGGTCAGTGGTGTGAGAGAAGAC 
JMFF043J08+           TTGGAAAAGTAAAATGAGCGAGGAAAGAGCGGATCGGGGTCAGTGGTGTGAGAGAAGACT
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consensus             TTGGAAAAGTAAAATGAGCGAGGAAAGAGCGGATCGGGGTCAGTGGTGTGAGAGAAGACT