Contig 012955:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042M20Sequence602012955 (2)emb|CDP17180.1|2e-04unnamed protein product [Coffea canephora]605017014ref|XP_011073652.1|2e-47PREDICTED: transcription factor bHLH18-like [Sesamum indicum]
JMSF036C06Sequence638012955 (2)emb|CDP17180.1|7e-12unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF036C06+                          TCGGAGGCCGGGGACTATGGTAGACAACGCTAGAAATTGACGGCT
JMFF042M20+                                                                     CT
                      ____________________________________________________________
consensus                            TCGGAGGCCGGGGACTATGGTAGACAACGCTAGAAATTGACGGCT
 
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JMSF036C06+           AAGAAGCTCCCGTCGTTTCCTTTCCGCCAATATATGATCATACCTATGGGTAGGTGGCCG
JMFF042M20+           AAGAAGCTCCCGTCGTTTCCTTTCCGCCAATATATGATCATACCTATGGGTAGGTGGCCG
                      ____________________________________________________________
consensus             AAGAAGCTCCCGTCGTTTCCTTTCCGCCAATATATGATCATACCTATGGGTAGGTGGCCG
 
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JMSF036C06+           GCCACGCCTACCGGATTTTTTCGGCTTNATCGTCGTCGTATCCGCCGGCTCCGTTTCCTG
JMFF042M20+           GCCACGCCTACCGGATTTTTTCGGCTTTATCGTCGTCGTATCCGCCGGCTCCGTTTCCTG
                      ____________________________________________________________
consensus             GCCACGCCTACCGGATTTTTTCGGCTTTATCGTCGTCGTATCCGCCGGCTCCGTTTCCTG
 
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JMSF036C06+           CTCGGCGATTGCGTTACTGGTGAGCAGTTCTTGACGCAGCTCCGGCAGGTTAACGTCGTC
JMFF042M20+           CTCGGCGATTGCGTTACTGGTGAGCAGTTCTTGACGCAGCTCCGGCAGGTTAACGTCGTC
                      ____________________________________________________________
consensus             CTCGGCGATTGCGTTACTGGTGAGCAGTTCTTGACGCAGCTCCGGCAGGTTAACGTCGTC
 
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JMSF036C06+           AATGTTAGGATGATGGTGGATCTTGAGTTGTTTTAACGGTCTGTCATCTTCGCCGAGATG
JMFF042M20+           AATGTTAGGATGATGGTGGATCTTGAGTTGTTTTAACGGTCTGTCATCTTCGCCGAGATG
                      ____________________________________________________________
consensus             AATGTTAGGATGATGGTGGATCTTGAGTTGTTTTAACGGTCTGTCATCTTCGCCGAGATG
 
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JMSF036C06+           GCAAGTCGTCGGCGGCGACCCCTCTTCCGGCGAAGAAGAGCAAAGGACATCTTCTCCGAG
JMFF042M20+           GCAAGTCGTCGGCGGCGACCCCTCTTCCGGCGAAGAAGAGCAAAGGACATCTTCTCCGAG
                      ____________________________________________________________
consensus             GCAAGTCGTCGGCGGCGACCCCTCTTCCGGCGAAGAAGAGCAAAGGACATCTTCTCCGAG
 
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JMSF036C06+           TACACCCGCAAATTCTTGCTCAATCGACTGCAAGATTTGAAACTGATCCAGGAATGACAG
JMFF042M20+           TACACCCGCAAATTCTTGCTCAATCGACTGCAAGATTTGAAACTGATCCAGGAATGACAG
                      ____________________________________________________________
consensus             TACACCCGCAAATTCTTGCTCAATCGACTGCAAGATTTGAAACTGATCCAGGAATGACAG
 
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JMSF036C06+           ATCGTCCGTTCCCATTCCAGAAAAACAAGCTTGGGAAAGATTCATCATGTTGTCACTGTT
JMFF042M20+           ATCGTCCGTTCCCATTCCAGAAAAACAAGCTTGGGAAAGATTCATCATGTTGTCACTGTT
                      ____________________________________________________________
consensus             ATCGTCCGTTCCCATTCCAGAAAAACAAGCTTGGGAAAGATTCATCATGTTGTCACTGTT
 
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JMSF036C06+           AGTTCTTGATGAAGTTATCAAAATCTGCAGAGATGTATTGGAATTTGGAAGATGGAGAAG
JMFF042M20+           AGTTCTTGATGAAGTTATCAAAATCTGCAGAGATGTATTGGAATTTGGAAGATGGAGAAG
                      ____________________________________________________________
consensus             AGTTCTTGATGAAGTTATCAAAATCTGCAGAGATGTATTGGAATTTGGAAGATGGAGAAG
 
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JMSF036C06+           AGAAAGTTGACAGCTGGAAAACTAAATAATTTCAAGAGTACGTGTGAAACTGTGAATTAA
JMFF042M20+           AGAAAGTTGACAGCTGGAAAACTAAATAATTTCAAGAGTACGTGTGAAACTGTGAATTAA
                      ____________________________________________________________
consensus             AGAAAGTTGACAGCTGGAAAACTAAATAATTTCAAGAGTACGTGTGAAACTGTGAATTAA
 
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JMSF036C06+           TCACGAGACTTGTTAGCATCGAACCAAACAGGCAATAACGCTATCTATATC         
JMFF042M20+           TCACGAGACTTGTTAGCATCGAACCAAACAGGCAATAACGCTATCTATATCTATATTTGC
                      ____________________________________________________________
consensus             TCACGAGACTTGTTAGCATCGAACCAAACAGGCAATAACGCTATCTATATCTATATTTGC