Contig 012954:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS107G01+                                                      CCGTAAACCCGACCCGG
                      ____________________________________________________________
consensus                                                        CCGTAAACCCGACCCGG
 
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JMFS107G01+           CTCCATCGTCATAATANAGCTGAAACCCGACTCCACCAGCGGTGCCGGCGGCGNCGGCAC
JMFF042K06+             CCATCGTCATAATAAAGCTGAAACCCGACTCCACCAGCGGTGCCGGCGGCGGCGGCAC
                      ____________________________________________________________
consensus             CTCCATCGTCATAATAAAGCTGAAACCCGACTCCACCAGCGGTGCCGGCGGCGGCGGCAC
 
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JMFS107G01+           CGCTGCTGCCGCCATCGGACGGGCCACGGAGGACGATAACCGGGTTAAACGGAGACCGGT
JMFF042K06+           CGCTGCTGCCGCCATCGGACGGGCCACGGAGGACGATAACCGGGTTAAACGGAGACCGGT
                      ____________________________________________________________
consensus             CGCTGCTGCCGCCATCGGACGGGCCACGGAGGACGATAACCGGGTTAAACGGAGACCGGT
 
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JMFS107G01+           CGCCCCCATTCCTCCGGCTCCTCCTGAGCGCGGGGCTCGATCCGGAACCCGCCGACCCGG
JMFF042K06+           CGCCCCCATTCCTCCGGCTCCTCCTGAGCGCGGGGCTCGATCCGGAACCCGCCGACCCGG
                      ____________________________________________________________
consensus             CGCCCCCATTCCTCCGGCTCCTCCTGAGCGCGGGGCTCGATCCGGAACCCGCCGACCCGG
 
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JMFS107G01+           CCGCGGCATTTTGATCCGAGTTCTGCGGCGTCGTGTACATCGCCGCCGCGGGGAACCGAC
JMFF042K06+           CCGCGGCATTTTGATCCGAGTTCTGCGGCGTCGTGTACATCGCCGCCGCGGGGAACCGAC
                      ____________________________________________________________
consensus             CCGCGGCATTTTGATCCGAGTTCTGCGGCGTCGTGTACATCGCCGCCGCGGGGAACCGAC
 
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JMFS107G01+           GCCGGCGGGATTCCGAGAGCGAGGAGGATCGCGTCGGCGTCTCGACCTCCTCGATAAATC
JMFF042K06+           GCCGGCGGGATTCCGAGAGCGAGGAGGATCGCGTCGGCGTCTCGACCTCCTCGATAAATC
                      ____________________________________________________________
consensus             GCCGGCGGGATTCCGAGAGCGAGGAGGATCGCGTCGGCGTCTCGACCTCCTCGATAAATC
 
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JMFS107G01+           CGCTGTCACAGTCGGGGCACGCGATTGAATTCTGGCTCGCCACTCTCACGAACCTATTGC
JMFF042K06+           CGCTGTCACAGTCGGGGCACGCGATTGAATCCTGGCTCGCCACTCTCACGAACCTATTGC
                      ____________________________________________________________
consensus             CGCTGTCACAGTCGGGGCACGCGATTGAATTCTGGCTCGCCACTCTCACGAACCTATTGC
 
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JMFS107G01+           AACTGTAACACCAATACGTGGAAGACGTCGACATCTATATATATAATAACCCACGAAGCT
JMFF042K06+           AACTGTAACACCAATACGTGGAAGACGTCGACATCTATATATATAATAACCCACGAAGCT
                      ____________________________________________________________
consensus             AACTGTAACACCAATACGTGGAAGACGTCGACATCTATATATATAATAACCCACGAAGCT
 
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JMFS107G01+           TTAATTTTCCGAACAAATCCCAAAAACCCAGAAAGGAAATTTCGAAACCAGATTTCAGAT
JMFF042K06+           TTAATTTTCCGAACAAATCCCAAAAACCCAGAAAGGAAATTTCGAAACCAGATTTCAGAT
                      ____________________________________________________________
consensus             TTAATTTTCCGAACAAATCCCAAAAACCCAGAAAGGAAATTTCGAAACCAGATTTCAGAT
 
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JMFS107G01+           CTGCAAATTTGAACACATAACCCCCCCAAAACCAGCTCTTTTTCGCAGATTCTGTGTAAA
JMFF042K06+           CTGCAAATTTGAACACATAACCCCCCCAAAACCAGCTCTTTTTCGCAGATTCTGTGTAAA
                      ____________________________________________________________
consensus             CTGCAAATTTGAACACATAACCCCCCCAAAACCAGCTCTTTTTCGCAGATTCTGTGTAAA
 
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JMFS107G01+           GATTGAATCTTTAGAGGTAATTGGGGCCTAATTGACAACAAAAAAGGGAAATTAAAGGGA
JMFF042K06+           GATTGAATCTTTAGAGGTAATTGGGGCCTAATTGACAACAAAAAAGGGAAATTAAAGGGA
                      ____________________________________________________________
consensus             GATTGAATCTTTAGAGGTAATTGGGGCCTAATTGACAACAAAAAAGGGAAATTAAAGGGA
 
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JMFS107G01+           AGAGGAGAGGAGACGTCGGTGGAAG                                   
JMFF042K06+           AGAGGAGAGGAGACGTCGGTGGAAGAATATTCCGGCAAGAGGAAGAAGAAGATGAGAGGA
                      ____________________________________________________________
consensus             AGAGGAGAGGAGACGTCGGTGGAAGAATATTCCGGCAAGAGGAAGAAGAAGATGAGAGGA