Contig 012950:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041J19Sequence636012950 (2)ref|XP_009776911.1|153PREDICTED: uncharacterized protein LOC104226581 [Nicotiana sylvestris]613012950 (2)ref|XP_009776911.1|125PREDICTED: uncharacterized protein LOC104226581 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF041J19-                                              GAGAGCAACTATACAAATTCATTC
                      ____________________________________________________________
consensus                                                 GAGAGCAACTATACAAATTCATTC
 
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rJMFF041J19-          AACTTGTTAAAAATGTAATAGTACAGCAAGAATACAGAGTGTTATTTCAAGATTTTGGTA
                      ____________________________________________________________
consensus             AACTTGTTAAAAATGTAATAGTACAGCAAGAATACAGAGTGTTATTTCAAGATTTTGGTA
 
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rJMFF041J19-          TGGCATCTGCAGGGCATTATATATTTATATTGCAGTCTTATTGTTATTCTTGGAATTGGA
                      ____________________________________________________________
consensus             TGGCATCTGCAGGGCATTATATATTTATATTGCAGTCTTATTGTTATTCTTGGAATTGGA
 
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rJMFF041J19-          TTGGATATTTCCCTCCTTTTCGCGTCTCTCTGCCTCTCTCAATGGAAAACTTTACGACCT
                      ____________________________________________________________
consensus             TTGGATATTTCCCTCCTTTTCGCGTCTCTCTGCCTCTCTCAATGGAAAACTTTACGACCT
 
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rJMFF041J19-          ACCATCCATGGATTACTCGGTATCCCTCTCCTGGAATGATGACTCGGGAACTTTCAGCAC
                      ____________________________________________________________
consensus             ACCATCCATGGATTACTCGGTATCCCTCTCCTGGAATGATGACTCGGGAACTTTCAGCAC
 
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rJMFF041J19-          CCGGGAGATACAATCCCATCTTGCCTCTTGGGGTCGGGCTGAGCACAAATGCTCAATGAA
                      ____________________________________________________________
consensus             CCGGGAGATACAATCCCATCTTGCCTCTTGGGGTCGGGCTGAGCACAAATGCTCAATGAA
 
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rJMFF041J19-          GGTCAATGGACCGAAATGAAGAGAGCGGTCTCTCCTTCCTTTCTTATCAAATCGAATCCA
JMFF041J19+                                   GCGGTCTCTCCTTCCTTTCTTATCAAATCGAATCCA
                      ____________________________________________________________
consensus             GGTCAATGGACCGAAATGAAGAGAGCGGTCTCTCCTTCCTTTCTTATCAAATCGAATCCA
 
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rJMFF041J19-          TCAATCTCCCCTCTAATTGCATAATCTGACCGTGCAAGCAACTGCCTGCGCCCAGTATTT
JMFF041J19+           TCAATCTCCCCTCTAATTGCATAATCTGACCGTGCAAGCAACTGCCTGCGCCCAGTATTT
                      ____________________________________________________________
consensus             TCAATCTCCCCTCTAATTGCATAATCTGACCGTGCAAGCAACTGCCTGCGCCCAGTATTT
 
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rJMFF041J19-          GAGACGAGCTTTAACATCTTCAGGATTATCACCAGGACTAGAGATTTTCCAATTGGCAAT
JMFF041J19+           GAGACGAGCTTTAACATCTTCAGGATTATCACCAGGACTAGAGATTTTCCAATTGGCAAT
                      ____________________________________________________________
consensus             GAGACGAGCTTTAACATCTTCAGGATTATCACCAGGACTAGAGATTTTCCAATTGGCAAT
 
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rJMFF041J19-          AGGGGTAGAGGCAGAAAAGGTGGAGGCTGTGTCAGACATGGATTCAGGAGACTTCTGGTG
JMFF041J19+           AGGGGTAGAGGCAGAAAAGGTGGAGGCTGTGTCAGACATGGATTCAGGAGACTTCTGGTG
                      ____________________________________________________________
consensus             AGGGGTAGAGGCAGAAAAGGTGGAGGCTGTGTCAGACATGGATTCAGGAGACTTCTGGTG
 
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rJMFF041J19-          ATCATCAAGGTACTTTTGGCTCATGGAATAGCANAGCTCAAGGGCAGGC           
JMFF041J19+           ATCATCAAGGTACTTTTGGCTCATGGAATAGCAAAGCTCAAGGGCAGGCAAGGTGTTCCG
                      ____________________________________________________________
consensus             ATCATCAAGGTACTTTTGGCTCATGGAATAGCAAAGCTCAAGGGCAGGCAAGGTGTTCCG
 
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JMFF041J19+           GATCTCAGGAATTTCCTCATAGTTAAAACCAAACCCAGATCCAAACACCCTTTAAGCTCC
                      ____________________________________________________________
consensus             GATCTCAGGAATTTCCTCATAGTTAAAACCAAACCCAGATCCAAACACCCTTTAAGCTCC
 
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JMFF041J19+           TCCAAATCATCATCAGTCAAGCTCTTTGTCCTCCCAAGCTCATCCTCATCTGATGTCTCC
                      ____________________________________________________________
consensus             TCCAAATCATCATCAGTCAAGCTCTTTGTCCTCCCAAGCTCATCCTCATCTGATGTCTCC
 
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JMFF041J19+           ACATACCCTTCAAGAAACACCTGCTTCTTCTTCTTCTTCTTCCCCTTCATGCTCTGCCAT
                      ____________________________________________________________
consensus             ACATACCCTTCAAGAAACACCTGCTTCTTCTTCTTCTTCTTCCCCTTCATGCTCTGCCAT
 
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JMFF041J19+           GGATCCTCTCCCTCCTCATTCTTGAACCACCCAAACCCATCTCCTTCAACTCCATGGAAA
                      ____________________________________________________________
consensus             GGATCCTCTCCCTCCTCATTCTTGAACCACCCAAACCCATCTCCTTCAACTCCATGGAAA
 
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JMFF041J19+           AGGGTTCCATGGGGTGGTGGTGATGGGGATCTTGATTCTGCATTATTGGATATACAGCTT
                      ____________________________________________________________
consensus             AGGGTTCCATGGGGTGGTGGTGATGGGGATCTTGATTCTGCATTATTGGATATACAGCTT
 
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JMFF041J19+           TCCATTTTCTTTTTTTTTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTATTTCTCTC
                      ____________________________________________________________
consensus             TCCATTTTCTTTTTTTTTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTATTTCTCTC