Contig 012944:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039F10Sequence496012944 (3)ref|XP_009598106.1|118PREDICTED: uncharacterized protein LOC104093972 [Nicotiana tomentosiformis]
JMFF047O16Sequence455012944 (3)ref|XP_006342263.1|108PREDICTED: uncharacterized protein LOC102587667 [Solanum tuberosum]371021330ref|XP_008353604.1|80.5PREDICTED: uncharacterized protein LOC103417190 [Malus domestica]
JMSF032L21Sequence708012944 (3)emb|CDP11316.1|2e-61unnamed protein product [Coffea canephora]684021510ref|XP_002271163.1|220PREDICTED: uncharacterized protein LOC100256852 [Vitis vinifera] emb|CBI28857.3|

Alignment

This contig is upended


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JMSF032L21+                                                                     AT
                      ____________________________________________________________
consensus                                                                       AT
 
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JMSF032L21+           GGCAATCTTTGAATGCTGAAAGAATCAACAGTAAATGAAACTTAATAATGAGAAATATCC
                      ____________________________________________________________
consensus             GGCAATCTTTGAATGCTGAAAGAATCAACAGTAAATGAAACTTAATAATGAGAAATATCC
 
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JMSF032L21+           AATCACAGCTCTTAAAGCCATAAGTGTATTGACATTCTTTGGGCCAAAAATTGGCTGTCC
                      ____________________________________________________________
consensus             AATCACAGCTCTTAAAGCCATAAGTGTATTGACATTCTTTGGGCCAAAAATTGGCTGTCC
 
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JMSF032L21+           AGTTCTCTTCAACCACACAAATGACAGAATCAAGAGCAATGTACATCTTGTAAACACCAT
                      ____________________________________________________________
consensus             AGTTCTCTTCAACCACACAAATGACAGAATCAAGAGCAATGTACATCTTGTAAACACCAT
 
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JMSF032L21+           CTCAAAAAGAGGAATTGATTGACCTGTAAAAAATTCTGAAACAACATCCATAGTACAATA
JMFF039F10+                                                      ACATCCATAGTACAATA
                      ____________________________________________________________
consensus             CTCAAAAAGAGGAATTGATTGACCTGTAAAAAATTCTGAAACAACATCCATAGTACAATA
 
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JMSF032L21+           GATTACAGATGAGATGGCCATGCATACCAGACCAGAGTACCTTGATCCACTCCATGCCCA
JMFF047O16+                               TGCATACCAGACCAGAGTACCTNGATCCACTCCATGCCCA
JMFF039F10+           GATTACAGATGAGATGGCCATGCATACCAGACCAGAGTACCTTGATCCACTCCATGCCCA
                      ____________________________________________________________
consensus             GATTACAGATGAGATGGCCATGCATACCAGACCAGAGTACCTTGATCCACTCCATGCCCA
 
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JMSF032L21+           TATTATAAACTGCGTAAATGGTGATGTATCGGATTCTGATGTTCTTATTACTTGCTCCTT
JMFF047O16+           TATTATAAACTGCGTAAATGGTGATGTATCGGATTCTGATGTTCTTATTACTTGCTCCTT
JMFF039F10+           TATTATAAACTGCGTAAATGGTGATGTATCGGATTCTGATGTTCTTATTACTTGCTCCTT
                      ____________________________________________________________
consensus             TATTATAAACTGCGTAAATGGTGATGTATCGGATTCTGATGTTCTTATTACTTGCTCCTT
 
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JMSF032L21+           ATTAGACTTTCGCCTAGGATACGAGATAGTGAAGATGTTGATCTTCGGCCTCTCCGTTTT
JMFF047O16+           ATTAGACTTTCGCCTAGGATACGAGATAGTGAAGATGTTGATCTTCGGCCTCTCCGTTTT
JMFF039F10+           ATTAGACTTTCGCCTAGGATACGAGATAGTGAAGATGTTGATCTTCGGCCTCTCCGTTTT
                      ____________________________________________________________
consensus             ATTAGACTTTCGCCTAGGATACGAGATAGTGAAGATGTTGATCTTCGGCCTCTCCGTTTT
 
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JMSF032L21+           GGGCAATAATGGAGTGATTTGGTCATCGGTAATGGCAACCGGAGCATCATCTGCGGGAGC
JMFF047O16+           GGGCAATAATGGAGTGATTTGGTCATCGGTAATGGCAACCGGAGCATCATCTGCTGGAGC
JMFF039F10+           GGGCAATAATGGAGTGATTTGGTCATCGGTAATGGCAACCGGAGCATCATCTGCTGGAGC
                      ____________________________________________________________
consensus             GGGCAATAATGGAGTGATTTGGTCATCGGTAATGGCAACCGGAGCATCATCTGCTGGAGC
 
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JMSF032L21+           CTCGGCATCGGAAGGAGGATCAGATGTTGCGTCAGTAGGCAACATGGACGTCTCCACCAG
JMFF047O16+           CTCGGCATCGGAAGGAGGATCAGATGTTGCGTCAGTAGGCAACATGGACGTCTCCACCAG
JMFF039F10+           CTCGGCATCGGAAGGAGGATCAGATGTTGCGTCAGTAGGCAACATGGACGTCTCCACCAG
                      ____________________________________________________________
consensus             CTCGGCATCGGAAGGAGGATCAGATGTTGCGTCAGTAGGCAACATGGACGTCTCCACCAG
 
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JMSF032L21+           CTCCACCAACTGCCCGCCCTCGATGTCTCCGTCCCCTCCGGCGACGATCCCGCCGTTCAT
JMFF047O16+           CTCCACCAACTGCCCGCCCTCGATGTCTCCGTCCCCTCCGGCGACGATCCCGCCGTTCAT
JMFF039F10+           CTCCACCAACTGCCCGCCCTCGATGTCTCCGTCCCCTCCGGCGACGATCCCGCCGTTCAT
                      ____________________________________________________________
consensus             CTCCACCAACTGCCCGCCCTCGATGTCTCCGTCCCCTCCGGCGACGATCCCGCCGTTCAT
 
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JMSF032L21+           CGACTCCCCTGCCGTCATTGTGCTTATTCCTAAGCCTAATTATCGATAATTCGATTATAA
JMFF047O16+           CGACTCCCCTGCCGTCATTGTGCTTATTCCTAAGCCTAATTATCGATAATTCGATTATAA
JMFF039F10+           CGACTCCCCTGCCGTCATTGTGCTTATTCCTAAGCCTAATTATCGATAATTCGATTATAA
                      ____________________________________________________________
consensus             CGACTCCCCTGCCGTCATTGTGCTTATTCCTAAGCCTAATTATCGATAATTCGATTATAA
 
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JMSF032L21+           TTTCCTCTCCCAGACGGCGTCAACAATG                                
JMFF047O16+           TTTCCTCTCCCAGACGGCGTCAACAATGTGCATGCGATCCACCAACGAAAGTGAT     
JMFF039F10+           TTTCCTCTCCCAGACGGCGTCAACAATG-GCATGCGATCCACCAACGAAAGTGATGAGAC
                      ____________________________________________________________
consensus             TTTCCTCTCCCAGACGGCGTCAACAATGTGCATGCGATCCACCAACGAAAGTGATGAGAC