Contig 012939:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014G20Sequence518012939 (6)ref|XP_009795380.1|5e-38PREDICTED: uncharacterized protein LOC104242088 isoform X2 [Nicotiana sylvestri748012939 (6)emb|CDP11506.1|3e-30unnamed protein product [Coffea canephora]
JMFF038L02Sequence556012939 (6)ref|XP_009795380.1|2e-24PREDICTED: uncharacterized protein LOC104242088 isoform X2 [Nicotiana sylvestri735012939 (6)ref|XP_006338057.1|176PREDICTED: uncharacterized protein LOC102606343 [Solanum tuberosum]
JMSF045N19Sequence770012939 (6)ref|XP_004252717.1|183PREDICTED: uncharacterized protein LOC101249158 [Solanum lycopersicum] ref|XP_01781012939 (6)ref|XP_006338057.1|171PREDICTED: uncharacterized protein LOC102606343 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF014G20- TTATAATGGGATGATACATTATCCAGTTATTTACAGT
                      ____________________________________________________________
consensus TTATAATGGGATGATACATTATCCAGTTATTTACAGT
 
. : . : . : . : . : . :
rJMFF014G20- AGAACATCTTCATTCACAATCAAACTGATCTATATGCAACAAGGTAGAATAAAGAACCAA
                      ____________________________________________________________
consensus AGAACATCTTCATTCACAATCAAACTGATCTATATGCAACAAGGTAGAATAAAGAACCAA
 
. : . : . : . : . : . :
rJMFF014G20- GCAATAGATGTCACATAATTATATACTCCAAATTCCAAAGAATGTTTGTAAGGCACACGA
rJMFF038L02- AATGTTTGTAAGGCACACGA
rJMSF045N19- AGGCACACGA
                      ____________________________________________________________
consensus GCAATAGATGTCACATAATTATATACTCCAAATTCCAAAGAATGTTTGTAAGGCACACGA
 
. : . : . : . : . : . :
rJMFF014G20- CATAACCCCGCCTTCTCCCTTCCTCGTTCTGGTTTAGCGTTTTCTAAGCCTAAGCTAGAG
rJMFF038L02- CATAACCCCGCCTTCTCCCTTCCTCGTTCTGGTTTAGCGTTTTCTAAGCCTAAGCTAGAG
rJMSF045N19- CATAACCCCGCCTTCTCCCTTCCTCGTTCTGGTTTAGCGTTTTCTAAGCCTAAGCTAGAG
                      ____________________________________________________________
consensus CATAACCCCGCCTTCTCCCTTCCTCGTTCTGGTTTAGCGTTTTCTAAGCCTAAGCTAGAG
 
. : . : . : . : . : . :
rJMFF014G20- AGCCAAGAGACAAGACACCATATAATCAACCTAGTACTAAAATTGCATATTTACATTCTT
rJMFF038L02- AGCCAAGAGACAAGACACCATATAATCAACCTAGTACTAAAATTGCATATTTACATTCTT
rJMSF045N19- AGCCAAGAGACAAGACACCATATAATCAACCTAGTACTAAAATTGCATATTTACATTCTT
                      ____________________________________________________________
consensus AGCCAAGAGACAAGACACCATATAATCAACCTAGTACTAAAATTGCATATTTACATTCTT
 
. : . : . : . : . : . :
rJMFF014G20- CATCGTCTTTTACTTTAGACACACGATCATATAGGAAGCACAATATTTCAATCCTCTGCT
rJMFF038L02- CATCGTCTTTTACTTTAGACACACGATCATATAGGAAGCACAATATTTCAATCCTCTGCT
rJMSF045N19- CATCGTCTTTTACTTTAGACACACGATCATATAGGAAGCACAATATTTCAATCCTCTGCT
                      ____________________________________________________________
consensus CATCGTCTTTTACTTTAGACACACGATCATATAGGAAGCACAATATTTCAATCCTCTGCT
 
. : . : . : . : . : . :
rJMFF014G20- GTTTATTCTCGTATCTTAGTGTTCTTGATTCCCCGCCTTTCTTGTTTGTGAGACTTTAAC
rJMFF038L02- GTTTATTCTCGTATCTTAGTGTTCTTGATTCCCCGCCTTTCTTGTTTGTGAGACTTTAAC
rJMSF045N19- GTTTATTCTCGTATCTTAGTGTTCTTGATTCCCCGCCTTTCTTGTTTGTGAGACTTTAAC
                      ____________________________________________________________
consensus GTTTATTCTCGTATCTTAGTGTTCTTGATTCCCCGCCTTTCTTGTTTGTGAGACTTTAAC
 
. : . : . : . : . : . :
rJMFF014G20- GATTCTGAAGTGAGGAAAGCCATTGTTCCATGTATGTCTTGCTGTCTGCATTGTCTGTGG
rJMFF038L02- GATTCTGAAGTGAGGAAAGCCATTGTTCCATGTATGTCTTGCTGTCTGCATTGTCTGTGG
rJMSF045N19- GATTCTGAAGTGAGGAAAGCCATTGTTCCATGTATGTCTTGCTGTCTGCATTGTCTGTGG
                      ____________________________________________________________
consensus GATTCTGAAGTGAGGAAAGCCATTGTTCCATGTATGTCTTGCTGTCTGCATTGTCTGTGG
 
. : . : . : . : . : . :
rJMFF014G20- CATATATATCTGGGATGTTTCGAATGGTGCACAGAAACTGTTCTTGCAAATTGTTTGCTA
rJMFF038L02- CATATATATCTGGGATGTTTCGAATGGTGCACAGAAACTGTTCTTGCAAATTGTTTGCTA
rJMSF045N19- CATATATATCTGGGATGTTTCGAATGGTGCACAGAAACTGTTCTTGCAAATTGTTTGCTA
JMSF045N19+ TGGGATGTTTCGAATGGTGCACAGAAACTGTTCTTGCAAATTGTTTGCTA
                      ____________________________________________________________
consensus CATATATATCTGGGATGTTTCGAATGGTGCACAGAAACTGTTCTTGCAAATTGTTTGCTA
 
. : . : . : . : . : . :
rJMFF014G20- AATTGATTCCACCACCACCACCACCGCGCCCATAGCAAGGAACCAGCACAGCGAAACTAT
rJMFF038L02- AATTGATTCCACCACCACCACCACCGCGCCCATAGCAAGGAACCAGCACAGCGAAACTAT
rJMSF045N19- AATTGATTCCACCACCACCACCACCGCGCCCATAGCAAGGAACCAGCACAGCGAAACTAT
JMSF045N19+ AATTGATTCCACCACCACCACCACCGCGCCCATAGCAAGGAACCAGCACAGCGAAACTAT
                      ____________________________________________________________
consensus AATTGATTCCACCACCACCACCACCGCGCCCATAGCAAGGAACCAGCACAGCGAAACTAT
 
. : . : . : . : . : . :
rJMFF014G20- CATCTGATTCATCGTCACTTTGGAAGCCCGAGCCATGAGGCTCCATCCATCCAATTGACC
rJMFF038L02- CATCTGATTCATCGTCACTTTGGAAGCCCGAGCCATGAGGCTCCATCCATCCAATTGACC
rJMSF045N19- CATCTGATTCATCGTCACTTTGGAAGCCCGAGCCATGAGGCTCCATCCATCCAATTGACC
JMSF045N19+ CATCTGATTCATCGTCACTTTGGAAGCCCGAGCCATGAGGCTCCATCCATCCAATTGACC
                      ____________________________________________________________
consensus CATCTGATTCATCGTCACTTTGGAAGCCCGAGCCATGAGGCTCCATCCATCCAATTGACC
 
. : . : . : . : . : . :
rJMFF014G20- AATCGGAATCATCAGAATCAGACCCCGACACACATCCACCGTCCGATGGCACGAGAACAA
rJMFF038L02- AATCGGAATCATCAGAATCAGACCCCGACACACATCCACCGTCCGATGGCACGAGAACAA
rJMSF045N19- AATCGGAATCATCAGAATCAGACCCCGACACACATCCACCGTCCGATGGCACGAGAACAA
JMFF014G20+ CGTCCGATGGCACGAGAACAA
JMSF045N19+ AATCGGAATCATCAGAATCAGACCCCGACACACATCCACCGTCCGATGGCACGAGAACAA
                      ____________________________________________________________
consensus AATCGGAATCATCAGAATCAGACCCCGACACACATCCACCGTCCGATGGCACGAGAACAA
 
. : . : . : . : . : . :
rJMFF014G20- TGTCATACTCTTTATCAACCTTCCTCTCCTCCCTGCTGTGCCATTTCCGCT
rJMFF038L02- TGTCATACTCTTTATCAACCTTCCTCTCCTCCCTGCTGTGCCATTTCCGCTTAACCCTTC
rJMSF045N19- TGTCATACTCTTTATCAACCTTCCTCTCCTCCCTGCTGTGCCATTTCCGCTTAACCCTTC
JMFF014G20+ TGTCATACTCTTTATCAACCTTCCTCTCCTCCCTGCTGTGCCATTTCCGCTTAACCCTTC
JMSF045N19+ TGTCATACTCTTTATCAACCTTCCTCTCCTCCCTGCTGTGCCATTTCCGCTTAACCCTTC
JMFF038L02+ CCATTTCCGCTTAACCCTTC
                      ____________________________________________________________
consensus TGTCATACTCTTTATCAACCTTCCTCTCCTCCCTGCTGTGCCATTTCCGCTTAACCCTTC
 
. : . : . : . : . : . :
rJMFF038L02- TGGAAGTGGAAGCCATATTTTGCCTGCGATCGAGGGGAAACTTCACGGTATCCAATTCCC
rJMSF045N19- TGGAAGTGGAAGCCATATTTTGCCTGCGATCGAGGGGAAACTTCACGGTATCCAATTCCC
JMFF014G20+ TGGAAGTGGAAGCCATATTTTGCCTGCGATCGAGGGGAAACTTCACGGTATCCAATTCCC
JMSF045N19+ TGGAAGTGGAAGCCATATTTTGCCTGCGATCGAGGGGAAACTTCACGGTATCCAATTCCC
JMFF038L02+ TGGAAGTGGAAGCCATATTTTGCCTGCGATCGAGGGGAAACTTCACGGTATCCAATTCCC
                      ____________________________________________________________
consensus TGGAAGTGGAAGCCATATTTTGCCTGCGATCGAGGGGAAACTTCACGGTATCCAATTCCC
 
. : . : . : . : . : . :
rJMFF038L02- ACAACCCAGATTCAGGCAATGGG--TTTAAGGTACT-CCCTTTCGAGATTTTGGGTTC
rJMSF045N19- ACAACCCAGATTCAGGCAATGGGGTTTAANGGTACTCCCCTTTCGAGATTTNGGGTTCTT
JMFF014G20+ ACAACCCAGATTCAGGCAATGGG--TTTAAGGTACT-CCCTTTCGAGATTTTGGGTTCTT
JMSF045N19+ ACAACCCAGATTCAGGCAATGGG--TTTAAGGTACT-CCCTTTCGAGATTTTGGGTTCTT
JMFF038L02+ ACAACCCAGATTCAGGCAATGGG--TTTAAGGTACT-CCCTTTCGAGATTTTGGGTTCTT
                      ____________________________________________________________
consensus ACAACCCAGATTCAGGCAATGGG--TTTAAGGTACT-CCCTTTCGAGATTTTGGGTTCTT
 
. : . : . : . : . : . :
rJMSF045N19- GGTGTTTCCCCACTCCACAGCCACCATGACAGGGAGGTTAATGCTATAG
JMFF014G20+ GGTGTTT-CCCACTCCACAGCCACCATGACAGGGAGGTTAATGCTATAGCCATTCTGCAA
JMSF045N19+ GGTGTTT-CCCACTCCACAGCCACCATGACAGGGAGGTTAATGCTATAGCCATTCTGCAA
JMFF038L02+ GGTGTTT-CCCACTCCACAGCCACCATGACAGGGAGGTTAATGCTATAGCCATTCTGCAA
                      ____________________________________________________________
consensus GGTGTTT-CCCACTCCACAGCCACCATGACAGGGAGGTTAATGCTATAGCCATTCTGCAA
 
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JMFF014G20+ AAAGCCCAAGAATTGCTTGGATCTTCAAGCGAAAACCGAAATCCAATACTCTGGGTATTC
JMSF045N19+ AAAGCCCAAGAATTGCTTGGATCTTCAAGCGAAAACCGAAATCCAATACTCTGGGTATTC
JMFF038L02+ AAAGCCCAAGAATTGCTTGGATCTTCAAGCGAAAACCGAAATCCAATACTCTGGGTATTC
                      ____________________________________________________________
consensus AAAGCCCAAGAATTGCTTGGATCTTCAAGCGAAAACCGAAATCCAATACTCTGGGTATTC
 
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JMFF014G20+ AAACAGATATTTCACCAGATAGAATTCAAAACTCAATATGCTGACCAAATCAACCAGATT
JMSF045N19+ AAACAGATATTTCACCAGATAGAATTCAAAACTCAATATGCTGACCAAATCAACCAGATT
JMFF038L02+ AAACAGATATTTCACCAGATAGAATTCAAAACTCAATATGCTGACCAAATCAACCAGATT
                      ____________________________________________________________
consensus AAACAGATATTTCACCAGATAGAATTCAAAACTCAATATGCTGACCAAATCAACCAGATT
 
. : . : . : . : . : . :
JMFF014G20+ GGTTATCCTTAAGGAACAAAAAATAGATAATGATCAGAGGCCTCTGCTAAACGCTATAAT
JMSF045N19+ GGTTATCCTTAAGGAACAAAAAATAGATAATGATCAGAGGCCTCTGCTAAACGCTATAAT
JMFF038L02+ GGTTATCCTTAAGGAACAAAAAATAGATAATGATCAGAGGCCTCTGCTAAACGCTATAAT
                      ____________________________________________________________
consensus GGTTATCCTTAAGGAACAAAAAATAGATAATGATCAGAGGCCTCTGCTAAACGCTATAAT
 
. : . : . : . : . : . :
JMFF014G20+ AATATTTACATAAAAAGCTTTCCGAACTGTGAATTTGATGTTTGTAAGAAAGAAGAAGAT
JMSF045N19+ AATATTTACATAAAAAGCTTTCCGAACTGTGAATTTGATGTTTGTAAGAAAGAAGAAGAT
JMFF038L02+ AATATTTACATAAAAAGCTTTCCGAACTGTGAATTTGATGTTTGTAAGAAAGAAGAAGAT
                      ____________________________________________________________
consensus AATATTTACATAAAAAGCTTTCCGAACTGTGAATTTGATGTTTGTAAGAAAGAAGAAGAT
 
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JMFF014G20+ AAAGATTTAGAGAGAGCGAAG
JMSF045N19+ AAAGATTTAGAGAGAGCGAAGGAGTGAAGAGAAAGGCTTTAGGGTGTTCTCTATCTTTAG
JMFF038L02+ AAAGATTTAGAGAGAGCGAAGGAGTGAAGAGAAAGGCTTTAGGGTGTTCTCTATCTTTAG
                      ____________________________________________________________
consensus AAAGATTTAGAGAGAGCGAAGGAGTGAAGAGAAAGGCTTTAGGGTGTTCTCTATCTTTAG
 
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JMSF045N19+ GAC
JMFF038L02+ GACTCAGTAGTTTGAAGCCGTGTGATTGTTTTCTTCTTCACAGGAATCACAGCTTCTCAT
                      ____________________________________________________________
consensus GACTCAGTAGTTTGAAGCCGTGTGATTGTTTTCTTCTTCACAGGAATCACAGCTTCTCAT