Contig 012931:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030G11Sequence568012931 (2)ref|XP_009367792.1|9e-39PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Pyrus x brets278011094 (2)
JMFF036J23Sequence577012931 (2)ref|XP_009367792.1|3e-38PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Pyrus x brets737011094 (2)ref|XP_009620976.1|8e-81PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Nicotiana tom

Alignment

This contig is upended


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JMFF030G11+                                TTTGAAATTCAGTTCCTAAATGCTTATCATAAACAGACT
JMFF036J23+                                         CAGTTCCTAAATGCTTATCATAAACAGACT
                      ____________________________________________________________
consensus                                  TTTGAAATTCAGTTCCTAAATGCTTATCATAAACAGACT
 
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JMFF030G11+           TCTTGGCACGCTTGACTGCAACAAAAGTTCCATCTCCAAGACGACCCTTGTAGACGGTCC
JMFF036J23+           TCTTGGCACGCTTGACTGCAACAAAAGTTCCATCTCCAAGACGACCCTTGTAGACGGTCC
                      ____________________________________________________________
consensus             TCTTGGCACGCTTGACTGCAACAAAAGTTCCATCTCCAAGACGACCCTTGTAGACGGTCC
 
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JMFF030G11+           CAAAACCACCTTGTCCAATTTTCAGGCTCAAGGAAAAGTTTTTTGTAGCTTTAATGATTT
JMFF036J23+           CAAAACCACCTTGTCCAATTTTCAGGCTCAAGGAAAAGTTTTTTGTAGCTTTAATGATTT
                      ____________________________________________________________
consensus             CAAAACCACCTTGTCCAATTTTCAGGCTCAAGGAAAAGTTTTTTGTAGCTTTAATGATTT
 
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JMFF030G11+           CTTCGATAGTAAATTTCACACTTCCAGGCTCTTTCATGTGGGTTGAATTGTTTGGATGAG
JMFF036J23+           CTTCGATAGTAAATTTCACACTTCCAGGCTCTTTCATGTGGGTTGAATTGTTTGGATGAG
                      ____________________________________________________________
consensus             CTTCGATAGTAAATTTCACACTTCCAGGCTCTTTCATGTGGGTTGAATTGTTTGGATGAG
 
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JMFF030G11+           CATAAATGTTCTGATTCGAATTACGTCTCCTCTCACTGCCAGTGCCTGAATAAACAGAGG
JMFF036J23+           CATAAATGTTCTGATTCGAATTACGTCTCCTCTCACTGCCAGTGCCTGAATAAACAGAGG
                      ____________________________________________________________
consensus             CATAAATGTTCTGATTCGAATTACGTCTCCTCTCACTGCCAGTGCCTGAATAAACAGAGG
 
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JMFF030G11+           GAGGTTTGAAGGAGTCGGAATCATCGAAATGAGTGGAGTCCTTCGAACCTGGAGGAGCAA
JMFF036J23+           GAGGTTTGAAGGAGTCGGAATCATCGAAATGAGTGGAGTCCTTCGAATCTGGAGGAGCAA
                      ____________________________________________________________
consensus             GAGGTTTGAAGGAGTCGGAATCATCGAAATGAGTGGAGTCCTTCGAATCTGGAGGAGCAA
 
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JMFF030G11+           AACAAGCTGCGAAAGCTCCGGCGACGGTCCGAGCGGCGACTTTGACCGGGTTGCCAGCAG
JMFF036J23+           AACAAGCTGCGAAAGCTCCGGCGACGGTCCGAGCGGCGACTTTGACCGGGTTGCCAGCAG
                      ____________________________________________________________
consensus             AACAAGCTGCGAAAGCTCCGGCGACGGTCCGAGCGGCGACTTTGACCGGGTTGCCAGCAG
 
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JMFF030G11+           AGGTGGTTGACCTGTGGGAGGATGAGGATGAAGAGTAGCTGGTAGATTGGGAGAAGCCGT
JMFF036J23+           AGGTGGTTGACCTGTGGGAGGATGAGGATGAAGAGTAGCTGGTAGATTGGGAGAAGCCGT
                      ____________________________________________________________
consensus             AGGTGGTTGACCTGTGGGAGGATGAGGATGAAGAGTAGCTGGTAGATTGGGAGAAGCCGT
 
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JMFF030G11+           CCGGCGTACGATGGCCGACAGATCCGGAGCTGGAGCTCGGGTTCCGCCTGCTCCGATTCA
JMFF036J23+           CCGGCGTACGATGGCCGACAGATCCGGAGCTGGAGCTCGGGTTCCGCCTGCTCCGATTCA
                      ____________________________________________________________
consensus             CCGGCGTACGATGGCCGACAGATCCGGAGCTGGAGCTCGGGTTCCGCCTGCTCCGATTCA
 
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JMFF030G11+           TCGGCGAGAGAGAGAGCAGAGTTGACGTGTAATGGCGGGTACGCACTAC           
JMFF036J23+           TCGGCGAGAGAGAGAGCAGAGTTGACGTGTAATGGCGGGTACGCACTACGCAGTAGCCAT
                      ____________________________________________________________
consensus             TCGGCGAGAGAGAGAGCAGAGTTGACGTGTAATGGCGGGTACGCACTACGCAGTAGCCAT