Contig 012926:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035J13Sequence548012926 (2)ref|XP_011096362.1|258PREDICTED: uncharacterized protein LOC105175576 [Sesamum indicum]512012926 (2)ref|XP_009775864.1|125PREDICTED: uncharacterized protein LOC104225708 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF035J13-                                                         AGCTAAAATAATT
                      ____________________________________________________________
consensus                                                            AGCTAAAATAATT
 
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rJMFF035J13-          CCAAGACTTTACATACAAATTTCATTAACTCACTCCATTCAATCAATTTTCCTTAAATCA
                      ____________________________________________________________
consensus             CCAAGACTTTACATACAAATTTCATTAACTCACTCCATTCAATCAATTTTCCTTAAATCA
 
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rJMFF035J13-          CCCCATCCAATTTTCAATATTAAACAATTTTTTTTTTCTTTCTATACAATGAAAGGGTTA
                      ____________________________________________________________
consensus             CCCCATCCAATTTTCAATATTAAACAATTTTTTTTTTCTTTCTATACAATGAAAGGGTTA
 
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rJMFF035J13-          TCAAACATTTTTTTTTTTAAAANATGGGNATATANAAATCGAGTTAATTATCAGNCGTNA
                      ____________________________________________________________
consensus             TCAAACATTTTTTTTTTTAAAANATGGGNATATANAAATCGAGTTAATTATCAGNCGTNA
 
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rJMFF035J13-          AGGGGAAACCAATTCCANGGNGTTNGGGGGGGAAAACAACAAAAAGCANACNGCAAACCN
                      ____________________________________________________________
consensus             AGGGGAAACCAATTCCANGGNGTTNGGGGGGGAAAACAACAAAAAGCANACNGCAAACCN
 
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rJMFF035J13-          CCCCAANGCCNACCGGNACCNCCGGGAGGATCNCCNGCNCTTCCTNGNACGGCNCCGGGN
                      ____________________________________________________________
consensus             CCCCAANGCCNACCGGNACCNCCGGGAGGATCNCCNGCNCTTCCTNGNACGGCNCCGGGN
 
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rJMFF035J13-          AAAAACAACTCACAACATTCTGATCAAACAGCGCAANANCCCCNAAAACCAGGACCGACA
JMFF035J13+             AAACAACTCACAACATTNTGATCAAACAGCGCAATAGCCCCGAAAACCAGGACCGACA
                      ____________________________________________________________
consensus             AAAAACAACTCACAACATTCTGATCAAACAGCGCAATAGCCCCGAAAACCAGGACCGACA
 
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rJMFF035J13-          TGACGGCGNGCNCAAAATCAANGAATTTCNCCTNGNACTTCCCCGCAAGTTCCGGNGGNA
JMFF035J13+           TGACGGCGTGCACGAAATCAATGAATTTCACCTTGTACTTCGCCGCAAGTTCCGGCGGCA
                      ____________________________________________________________
consensus             TGACGGCGTGCACGAAATCAATGAATTTCACCTTGTACTTCGCCGCAAGTTCCGGCGGCA
 
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rJMFF035J13-          AACTCNCCNACCCGTCAATCACCCACAGCCCTTTCACCGTCNCCACCCCGAAACAAACGT
JMFF035J13+           GACTCGCCGACCCGTCGATCACCCACAGCCCTTTCACCGTCGCCACCCCGTAACAGACGT
                      ____________________________________________________________
consensus             GACTCGCCGACCCGTCGATCACCCACAGCCCTTTCACCGTCGCCACCCCGTAACAGACGT
 
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rJMFF035J13-          TCCCCTTCNGGNCCTTGAA                                         
JMFF035J13+           TCCCCTTCTGGTCCTTGAAGCTGTCGGTGAAGCTGAGCAGAAAACACGAGAGGCCACACA
                      ____________________________________________________________
consensus             TCCCCTTCTGGTCCTTGAAGCTGTCGGTGAAGCTGAGCAGAAAACACGAGAGGCCACACA
 
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JMFF035J13+           TGGCGACGAGAGACGCCGTCAAGAACCGACTCACGGCGTCGCAGTCGCCCTGGTTGGAGA
                      ____________________________________________________________
consensus             TGGCGACGAGAGACGCCGTCAAGAACCGACTCACGGCGTCGCAGTCGCCCTGGTTGGAGA
 
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JMFF035J13+           ATATGGGCGATAGAAGCTGGAAAGCCAGAACCGCGCCGGTGGGGAGAAGGTTGGCTAAAT
                      ____________________________________________________________
consensus             ATATGGGCGATAGAAGCTGGAAAGCCAGAACCGCGCCGGTGGGGAGAAGGTTGGCTAAAT
 
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JMFF035J13+           GGGCGGCGCTCTGAAACGTCTGACTAATGGCTTTCTGTACGAGGTTTTTCTCCACTTCAT
                      ____________________________________________________________
consensus             GGGCGGCGCTCTGAAACGTCTGACTAATGGCTTTCTGTACGAGGTTTTTCTCCACTTCAT
 
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JMFF035J13+           CGGGAACCAACAATGGAACTTTTTCACTAACAACAACATTATTATGGGACAACTCTTCGT
                      ____________________________________________________________
consensus             CGGGAACCAACAATGGAACTTTTTCACTAACAACAACATTATTATGGGACAACTCTTCGT
 
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JMFF035J13+           CTCCCACATGAATATCCATCTCTTAGAATCTGACAATTTCTTTATCGTTTCTTGGTCCAA
                      ____________________________________________________________
consensus             CTCCCACATGAATATCCATCTCTTAGAATCTGACAATTTCTTTATCGTTTCTTGGTCCAA