Contig 012922:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034M17Sequence570012922 (2)ref|XP_009600116.1|3e-106PREDICTED: exonuclease 1 isoform X1 [Nicotiana tomentosiformis]755015949ref|XP_009804506.1|2e-45PREDICTED: exonuclease 1 isoform X3 [Nicotiana sylvestris]
JMFS077F04Sequence627012922 (2)ref|XP_009600116.1|2e-69PREDICTED: exonuclease 1 isoform X1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS077F04+ CTGCAGGAA
                      ____________________________________________________________
consensus CTGCAGGAA
 
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JMFS077F04+ CTTGATCTCCAATAGACAGGTGAACAATATCCCCAACAACTAAATCATAGATAGAAACTT
                      ____________________________________________________________
consensus CTTGATCTCCAATAGACAGGTGAACAATATCCCCAACAACTAAATCATAGATAGAAACTT
 
. : . : . : . : . : . :
JMFS077F04+ TTTCTCTGCTCCCATTTCTGGTGACATGAATTTGAATGTTTTTCTTCTCTTTATCCAGGT
                      ____________________________________________________________
consensus TTTCTCTGCTCCCATTTCTGGTGACATGAATTTGAATGTTTTTCTTCTCTTTATCCAGGT
 
. : . : . : . : . : . :
JMFS077F04+ CCTTAAACTGCAAAGACTGCCTGTAGTCACTGACTGCGGTGACTAGAACCACCAAGAAAA
                      ____________________________________________________________
consensus CCTTAAACTGCAAAGACTGCCTGTAGTCACTGACTGCGGTGACTAGAACCACCAAGAAAA
 
. : . : . : . : . : . :
JMFS077F04+ TGCAGAGAATTATCCCCACCCCATCATACATGCCCTTTGGCCACCCTTCCCTGGCAATCC
                      ____________________________________________________________
consensus TGCAGAGAATTATCCCCACCCCATCATACATGCCCTTTGGCCACCCTTCCCTGGCAATCC
 
. : . : . : . : . : . :
JMFS077F04+ CAATACCTGAAATAGCTCAGAGGCACCATTAACATCACCTTCCTTAAACTTTTCCATTGC
JMFF034M17+ CTGAAAGAGCTCAGAGGCACCATTAACATCACCTTCCTTAAACTTTGTCATTGC
                      ____________________________________________________________
consensus CAATACCTGAAATAGCTCAGAGGCACCATTAACATCACCTTCCTTAAACTTTTTCATTGC
 
. : . : . : . : . : . :
JMFS077F04+ CTGATCACGATTAGCTTTCCTTTTCCTGTGCCTCTCATCTTCAGTGGCTGCCTTACAAGG
JMFF034M17+ CTGATCACGATTAGCTTTCCTTTTCCTGTGCCTCTCATCTTCAGTGGCTGCCTTACAAGG
                      ____________________________________________________________
consensus CTGATCACGATTAGCTTTCCTTTTCCTGTGCCTCTCATCTTCAGTGGCTGCCTTACAAGG
 
. : . : . : . : . : . :
JMFS077F04+ CAGATTTCCACCGTCAAAAACAACAACGGGAGTAATCTTATAGTGTCGAAGCAAATTGAT
JMFF034M17+ CAGATTTCCACCGTCGAAAACAACAACCGGAGTAATCTTATAGTGTCGAAGCAAATTGAT
                      ____________________________________________________________
consensus CAGATTTCCACCGTCGAAAACAACAACGGGAGTAATCTTATAGTGTCGAAGCAAATTGAT
 
. : . : . : . : . : . :
JMFS077F04+ TCGATGCATGAAGTAACTTAAGTACTGCAATTTCTTCCCACCTTCCATATCCAGACTGAG
JMFF034M17+ TCGATGCATGAAGTAACTTAAGTACTGCAATTTCTTCCCACCTTCCATATCCAGAGAGAG
                      ____________________________________________________________
consensus TCGATGCATGAAGTAACTTAAGTACTGCAATTTCTTCCCACCTTCCATATCCAGAGTGAG
 
. : . : . : . : . : . :
JMFS077F04+ CTCCATACTACATGAATATGCCCCTTTGTGCAGCCATGAATAAGCGTCAATCCCAACTCG
JMFF034M17+ CTCCATACTACATGAATATGCCCCTTTGTGCAGCCATGAATAAGCGTCAATCCCAACTCG
                      ____________________________________________________________
consensus CTCCATACTACATGAATATGCCCCTTTGTGCAGCCATGAATAAGCGTCAATCCCAACTCG
 
. : . : . : . : . : . :
JMFS077F04+ TTAACCGGCGTATTTTCTTATGTGGATGGGTTCAAGGTGGGGTTTCATGAACCTGAGGAG
JMFF034M17+ TTGACCGGCGTATTTTTTAATGTGGATGGGTTCAAGGTGAGGTTTCATGAACCTGAGGAG
                      ____________________________________________________________
consensus TTGACCGGCGTATTTTTTTATGTGGATGGGTTCAAGGTGGGGTTTCATGAACCTGAGGAG
 
. : . : . : . : . : . :
JMFS077F04+ ATCTTTGATACCCATTGC
JMFF034M17+ ATCTTTGATACCCATTGCCGACTTTGTAGCAAATAATACTGGGTAGTTCTTTTCTCTTCT
                      ____________________________________________________________
consensus ATCTTTGATACCCATTGCCGACTTTGTAGCAAATAATACTGGGTAGTTCTTTTCTCTTCT