Contig 012917:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032G07Sequence514012917 (2)dbj|BAO02515.1|2e-73predicted C2 domain containing protein [Nicotiana alata]686012917 (2)ref|XP_009783267.1|5e-53PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD13 [Ni

Alignment

This contig is upended


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rJMFF032G07-                                           TTCTTATGTAAAATTACAATCTTATTA
                      ____________________________________________________________
consensus                                              TTCTTATGTAAAATTACAATCTTATTA
 
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rJMFF032G07-          TTATTACAAAGAAGAAGAAGATTTTGAGTACATTTATCTCATGAAAATTTAAAAAAGAAA
                      ____________________________________________________________
consensus             TTATTACAAAGAAGAAGAAGATTTTGAGTACATTTATCTCATGAAAATTTAAAAAAGAAA
 
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rJMFF032G07-          AATAATAATAAATGAAATATTTGAGGGCCCATATATGATATATGCATGTTAAGATACATA
                      ____________________________________________________________
consensus             AATAATAATAAATGAAATATTTGAGGGCCCATATATGATATATGCATGTTAAGATACATA
 
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rJMFF032G07-          ACTTACATAAATGGTCATAGAGGTCCATTTTATGTGACATTGGGGCTATGAACCAAATGC
                      ____________________________________________________________
consensus             ACTTACATAAATGGTCATAGAGGTCCATTTTATGTGACATTGGGGCTATGAACCAAATGC
 
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rJMFF032G07-          TTAACAGAACAGCAGTAGAGATTTGAAGAAGAAGAGAGAGTGGTGGGTGCTGCTCTCTTT
                      ____________________________________________________________
consensus             TTAACAGAACAGCAGTAGAGATTTGAAGAAGAAGAGAGAGTGGTGGGTGCTGCTCTCTTT
 
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rJMFF032G07-          CAAGTTTCAAGTTTTCAACCTAACTGGCCAGGGAGGTTAATCCACTGAAGTTGGAGCTCC
JMFF032G07+                                     GCCAGGGAGGTTAATCCACTGAAGTTGGAGCTCC
                      ____________________________________________________________
consensus             CAAGTTTCAAGTTTTCAACCTAACTGGCCAGGGAGGTTAATCCACTGAAGTTGGAGCTCC
 
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rJMFF032G07-          ACCTCGCCGCACTCTACGTTTCTCAATCGCAGGACATATCTTGCGAGACCATGCCGTCTT
JMFF032G07+           ACCTCGCCGCACTCTACGTTTCTCAATCGCAGGACATATCTTGCGAGACCATGCCGTCTT
                      ____________________________________________________________
consensus             ACCTCGCCGCACTCTACGTTTCTCAATCGCAGGACATATCTTGCGAGACCATGCCGTCTT
 
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rJMFF032G07-          TCCAGACCACACACGACTCCTCGGCCAGGCAGTTAGCCCTGCACGGTAGTATTCGTGTGA
JMFF032G07+           TCCAGACCACACACGACTCCTCGGCCAGGCAGTTAGCCCTGCACGGTAGTATTCGTGTGA
                      ____________________________________________________________
consensus             TCCAGACCACACACGACTCCTCGGCCAGGCAGTTAGCCCTGCACGGTAGTATTCGTGTGA
 
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rJMFF032G07-          TCACGGTGCCACTCGGGTACCCATCTAAATTCATCTGCAGGGCGTCTAGAAATGGCTTAA
JMFF032G07+           TCACGGTGCCACTCGGGTACCCATCTAAATTCATCTGCAGGGCGTCTAGAAATGGCTTAA
                      ____________________________________________________________
consensus             TCACGGTGCCACTCGGGTACCCATCTAAATTCATCTGCAGGGCGTCTAGAAATGGCTTAA
 
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rJMFF032G07-          TGTCGAACTCTGCGTCTCCCATTAGGTCGTCCATCGTGAATGTGTCGTGATCGTACACCG
JMFF032G07+           TGTCGAACTCTGCGTCTCCCATTAGGTCGTCCATCGTGAATGTGTCGTGATCGTACACCG
                      ____________________________________________________________
consensus             TGTCGAACTCTGCGTCTCCCATTAGGTCGTCCATCGTGAATGTGTCGTGATCGTACACCG
 
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rJMFF032G07-          TCAGCGTAATGGGAGTGTTAGGATCTGTGACAGTAAGGGTAAGATCTTCATTCCATTCAG
JMFF032G07+           TCAGCGTAATGGGAGTGTTAGGATCTGTGACAGTAAGGGTAAGATCTTCATTCCATTCAG
                      ____________________________________________________________
consensus             TCAGCGTAATGGGAGTGTTAGGATCTGTGACAGTAAGGGTAAGATCTTCATTCCATTCAG
 
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rJMFF032G07-          GGTTGACGTCCTTCTGTACAATACGAGTCTTCATCTTCTGNTGATCCATCTTGACAACA 
JMFF032G07+           GGTTGACGTCCTTCTGTACAATACGAGTCTTCATCTTCTGTTGATCCATCTTGACAACAA
                      ____________________________________________________________
consensus             GGTTGACGTCCTTCTGTACAATACGAGTCTTCATCTTCTGTTGATCCATCTTGACAACAA
 
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JMFF032G07+           TGTAGGGATCGCTGCTCCTCATATCGCGAACGGCGAGGTTGACACCTCGTTTGATATGAA
                      ____________________________________________________________
consensus             TGTAGGGATCGCTGCTCCTCATATCGCGAACGGCGAGGTTGACACCTCGTTTGATATGAA
 
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JMFF032G07+           CTTTGAGAATTCCTAAGATTTCTTCCATTACAGAATCGATGACGTTCTGCGTTGATGCCC
                      ____________________________________________________________
consensus             CTTTGAGAATTCCTAAGATTTCTTCCATTACAGAATCGATGACGTTCTGCGTTGATGCCC