Contig 012913:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031A09Sequence555012913 (9)ref|XP_010270927.1|138PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]753008088 (9)ref|XP_009617529.1|372PREDICTED: uncharacterized protein LOC104109859 [Nicotiana tomentosiformis]
JMFF044J21Sequence637012913 (9)ref|XP_010270927.1|184PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]584008088 (9)ref|XP_009617529.1|277PREDICTED: uncharacterized protein LOC104109859 [Nicotiana tomentosiformis]
JMFS155B07Sequence620012913 (9)ref|XP_010270927.1|181PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]
JMSF003C05Sequence363012913 (9)ref|XP_010270927.1|135PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]716008088 (9)ref|XP_009617529.1|374PREDICTED: uncharacterized protein LOC104109859 [Nicotiana tomentosiformis]
JMSF012L13Sequence236012913 (9)729008088 (9)ref|XP_009773068.1|365PREDICTED: uncharacterized protein LOC104223342 [Nicotiana sylvestris]
JMSF042J16Sequence839012913 (9)ref|XP_010270927.1|291PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]795008088 (9)ref|XP_009773068.1|373PREDICTED: uncharacterized protein LOC104223342 [Nicotiana sylvestris]
JMSF045N24Sequence774012913 (9)ref|XP_010270927.1|277PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]733008088 (9)ref|XP_009617529.1|368PREDICTED: uncharacterized protein LOC104109859 [Nicotiana tomentosiformis]
JMSF047J13Sequence675012913 (9)ref|XP_010270927.1|207PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]762008088 (9)ref|XP_009773068.1|391PREDICTED: uncharacterized protein LOC104223342 [Nicotiana sylvestris]
JMSF051A03Sequence687012913 (9)ref|XP_010270927.1|205PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]732008088 (9)ref|XP_009617529.1|372PREDICTED: uncharacterized protein LOC104109859 [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+                                                                    TGG
JMSF042J16+                                                    GTCGTCGGCTTGGCGATGG
                      ____________________________________________________________
consensus                                                      GTCGTCGGCTTGGCGATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           AAGTAGATAGTCGAATCGCCGGACCAAGTAGGCCAACCACCGTGTTTGCAGAGAAGAGTT
JMSF042J16+           AAGTAGATAGTCGAATCGCCGGACCAAGTAGGCCAACCACCGTGTTTGCAGAGAAGAGTT
                      ____________________________________________________________
consensus             AAGTAGATAGTCGAATCGCCGGACCAAGTAGGCCAACCACCGTGTTTGCAGAGAAGAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           CGGCTAGCGGGATCGGACTCCCGGAACACGACGATATCAGTTTGGAGATCGCGGAACTCA
JMSF042J16+           CGGCTAGCGGGATCGGACTCCCGGAACACGACGATATCAGTTTGGAGATCGCGGAACTCA
                      ____________________________________________________________
consensus             CGGCTAGCGGGATCGGACTCCCGGAACACGACGATATCAGTTTGGAGATCGCGGAACTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           CCCGCCCAGGGACGAGACCCGTAAGATGCGACGGCGATGAATTCGCCGGACTGAGAAACG
JMSF051A03+                     GACGAGACCCGTAAGATGCGACGGCGATGAATTCGCCGGACTGAGAAACG
JMSF047J13+                     GACGAGACCCGTAAGATGCGACGGCGATGAATTCGCCGGACTGAGAAACG
JMFF044J21+                                                        CCGGACTGAGAAACG
JMFS155B07+                                                               GAGAAACG
JMSF042J16+           CCCGCCCAGGGACGAGACCCGTAAGATGCGACGGCGATGAATTCGCCGGACTGAGAAACG
                      ____________________________________________________________
consensus             CCCGCCCAGGGACGAGACCCGTAAGATGCGACGGCGATGAATTCGCCGGACTGAGAAACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           GAGGGGCTGAAATCAACGGCACCGTACGGCGTCAACCGCGTGATTTCCTTTAAACCTAGA
JMSF051A03+           GAGGGGCTGAAATCAACGGCACCGTACGGCGTCAACCGCGTGATTTCCTTTAAACCTAGA
JMSF047J13+           GAGGGGCTGAAATCAACGGCACCGTACGGCGTCAACCGCGTGATTTCCTTTAAACCTAGA
JMFF044J21+           GAGGGGCTGAAATCAACGGCACCGTACGGCGTCAACCGCGTGATTTCCTTTAAACCTAGA
JMFS155B07+           GAGGGGCTGAAATCAACGGCACCGTACGGCGTCAACCGCGTGATTTCCTTTAAACCTAGA
JMSF042J16+           GAGGGGCTGAAATCAACGGCACCGTACGGCGTCAACCGCGTGATTTCCTTTAAACCTAGA
                      ____________________________________________________________
consensus             GAGGGGCTGAAATCAACGGCACCGTACGGCGTCAACCGCGTGATTTCCTTTAAACCTAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           TGGGTGGAGTAAAGCGCAGACCAGCTCTTGAACACTTCCTTGGGCGGCTCATGAGCAGAG
JMSF051A03+           TGGGTGGAGTAAAGCGCAGACCAGCTCTTGAACACTTCCTTGGGCGGCTCATGAGCAGAG
JMSF047J13+           TGGGTGGAGTAAAGCGCAGACCAGCTCTTGAACACTTCCTTGGGCGGCTCATGAGCAGAG
JMFF044J21+           TGGGTGGAGTAAAGCGCAGACCAGCTCTTGAACACTTCCTTGGGCGGCTCATGAGCAGAG
JMSF003C05+                                                             ATGAGCAGAG
JMFS155B07+           TGGGTGGAGTAAAGCGCAGACCAGCTCTTGAACACTTCCTTGGGCGGCTCATGAGCAGAG
JMSF042J16+           TGGGTGGAGTAAAGCGCAGACCAGCTCTTGAACACTTCCTTGGGCGGCTCATGAGCAGAG
JMFF031A09+                                                        GGCTCATGAGCAGAG
                      ____________________________________________________________
consensus             TGGGTGGAGTAAAGCGCAGACCAGCTCTTGAACACTTCCTTGGGCGGCTCATGAGCAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           ATATAAAGCAGCCGTCCATCTCTGACGACCGGACGGTCATGAAAGAGGGTTCCAGAGGGG
JMSF051A03+           ATATAAAGCAGCCGTCCATCTCTGACGACCGGACGGTCATGAAAGAGGGTTCCAGAGGGG
JMSF047J13+           ATATAAAGCAGCCGTCCATCTCTGACGACCGGACGGTCATGAAAGAGGGTTCCAGAGGGG
JMFF044J21+           ATATAAAGCAGCCGTCCATCTCTGACGACCGGACGGTCATGAAAGAGGGTTCCAGAGGGG
JMSF003C05+           ATATAAAGCAGCCGTCCATCTCTGACGACCGGACGGTCATGAAAGAGGGTTCCAGAGGGG
JMFS155B07+           ATATAAAGCAGCCGTCCATCTCTGACGACCGGACGGTCATGAAAGAGGGTTCCAGAGGGG
JMSF042J16+           ATATAAAGCAGCCGTCCATCTCTGACGACCGGACGGTCATGAAAGAGGGTTCCAGAGGGG
JMFF031A09+           ATATAAAGCAGCCGTCCATCTCTGACGACCGGACGGTCATGAAAGAGGGTTCCAGAGGGG
                      ____________________________________________________________
consensus             ATATAAAGCAGCCGTCCATCTCTGACGACCGGACGGTCATGAAAGAGGGTTCCAGAGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           GAGAGTAACTGCTGCGGTTTTCCGGCGGAGGCGGAGCGATTCTCTTGCAAGTAAATCCGA
JMSF051A03+           GAGAGTAACTGCTGCGGTTTTCCGGCGGAGGCGGAGCGATTCTCTTGCAAGTAAATCCGA
JMSF047J13+           GAGAGTAACTGCTGCGGTTTTCCGGCGGAGGCGGAGCGATTCTCTTGCAAGTAAATCCGA
JMFF044J21+           GAGAGTAACTGCGGCGGTTTTCCGGCGGAGGCGGAGCGATTCTCTTGCAAGTAAATCCGA
JMSF003C05+           GAGAGTAACTGCTGCGGTTTTCCGGCGGAGGCGGAGCGATTCTCTTGCAAGTAAATCCGA
JMFS155B07+           GAGAGTAACTGCTGCGGTTTTCCGGCGGAGGCGGAGCGATTCTCTTGCAAGTAAATCCGA
JMSF042J16+           GAGAGTAACTGCTGCGGTTTTCCGGCGGAGGCGGAGCGATTCTCTTGCAAGTAAATCCGA
JMFF031A09+           GAGAGTAACTGCTGCGGTTTTCCGGCGGAGGCGGAGCGATTCTCTTGCAAGTAAATCCGA
                      ____________________________________________________________
consensus             GAGAGTAACTGCTGCGGTTTTCCGGCGGAGGCGGAGCGATTCTCTTGCAAGTAAATCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           GGCGACCCGGATCTCTCGGAGACAAAGACAAAGGTGTCGCCTTCATCGAGAAAGTGGCCG
JMSF051A03+           GGCGACCCGGATCTCTCGGAGACAAAGACAAAGGTGTCGCCTTCATCGAGAAAGTGGCCG
JMSF047J13+           GGCGACCCGGATCTCTCGGAGACAAAGACAAAGGTGTCGCCTTCATCGAGAAAGTGGCCG
JMFF044J21+           GGCGACCCGGATCTCTCGGAGACAAAGACAAAGGTGTCGCCTTCATCGAGAAAGTGGCCG
JMSF003C05+           GGCGACCCGGATCTCTCGGAGACAAAGACAAAGGTGTCGCCTTCATCGAGAAAGTGGCCG
JMFS155B07+           GGCGACCCGGATCTCTCGGAGACAAAGACAAAGGTGTCGCCTTCATCGAGAAAGTGGCCG
JMSF042J16+           GGCGACCCGGATCTCTCGGAGACAAAGACAAAGGTGTCGCCTTCATCGAGAAAGTGGCCG
JMFF031A09+           GGCGACCCGGATCTCTCGGAGACAAAGACAAAGGTGTCGCCTTCATCGAGAAAGTGGCCG
                      ____________________________________________________________
consensus             GGCGACCCGGATCTCTCGGAGACAAAGACAAAGGTGTCGCCTTCATCGAGAAAGTGGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           TTGAAGTTAATGGAGACGCCGTCGGTGAGGCGGTGCTCGGAGGCGGGGCGGCGGTCCTGT
JMSF051A03+           TTGAAGTTAATGGAGACGCCGTCGGTGAGGCGGTGCTCGGAGGCGGGGCGGCGGTCCTGT
JMSF047J13+           TTGAAGTTAATGGAGACGCCGTCGGTGAGGCGGTGCTCGGAGGCGGGGCGGCGGTCCTGT
JMFF044J21+           TTGAAGTTAATGGAGACGCCGTCGGTGAGGCGGTGCTCGGAGGCGGGGCGGCGGTCCTGT
JMSF003C05+           TTGAAGTTAATGGAGACGCCGTCGGTGAGGCGGTGCTCGGAGGCGGGGCGGCGGTCCTGT
JMFS155B07+           TTGAAGTTAATGGAGACGCCGTCGGTGAGGCGGTGCTCGGAGGCGGGGCGGCGGTCCTGT
JMSF042J16+           TTGAAGTTAATGGAGACGCCGTCGGTGAGGCGGTGCTCGGAGGCGGGGCGGCGGTCCTGT
JMFF031A09+           TTGAAGTTAATGGAGACGCCGTCGGTGAGGCGGTGCTCGGAGGCGGGGCGGCGGTCCTGT
                      ____________________________________________________________
consensus             TTGAAGTTAATGGAGACGCCGTCGGTGAGGCGGTGCTCGGAGGCGGGGCGGCGGTCCTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           TCGAAACTAGACGGAAGTTGAACGGAGAAGATATCGAAGCCGTAGTGAGATCTGCCGACG
JMSF051A03+           TCGAAACTAGACGGAAGTTGAACGGAGAAGATATCGAAGCCGTAGTGAGATCTGCCGACG
JMSF047J13+           TCGAAACTAGACGGAAGTTGAACGGAGAAGATATCGAAGCCGTAGTGAGATCTGCCGACG
JMFF044J21+           TCGAAACTAGACGGAAGTTGAACGGAGAAGATATCGAAGCCGTAGTGAGATCTGCCGACG
JMSF003C05+           TCGAAACTAGACGGAAGTTGAACGGAGAAGATATCGAAGCCGTAGTGAGATCTGCCGACG
JMFS155B07+           TCGAAACTAGACGGAAGTTGAACGGAGAAGATATCGAAGCCGTAGTGAGATCTGCCGACG
JMSF012L13+                                                    GTAGTGAGATCTGCCGACG
JMSF042J16+           TCGAAACTAGACGGAAGTTGAACGGAGAAGATATCGAAGCCGTAGTGAGATCTGCCGACG
JMFF031A09+           TCGAAACTAGACGGAAGTTGAACGGAGAAGATATCGAAGCCGTAGTGAGATCTGCCGACG
                      ____________________________________________________________
consensus             TCGAAACTAGACGGAAGTTGAACGGAGAAGATATCGAAGCCGTAGTGAGATCTGCCGACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           GTGGAGAACACAATCGTTCCGTGAGGATCCATTATCATTATCGGAGGTTTAGGGATACGC
JMSF051A03+           GTGGAGAACACAATCGTTCCGTGAGGATCCATTATCATTATCGGAGGTTTAGGGATACGC
JMSF047J13+           GTGGAGAACACAATCGTTCCGTGAGGATCCATTATCATTATCGGAGGTTTAGGGATACGC
JMFF044J21+           GTGGAGAACACAATCGTTCCGTGAGGATCCATTATCATTATCGGAGGTTTAGGGATACGC
JMSF003C05+           GTGGAGAACACAATCGTTCCGTGAGGATCCATTATCATTATCGGAGGTTTAG        
JMFS155B07+           GTGGAGAACACAATCGTTCCGTGAGGATCCATTATCATTATCGGAGGTTTAGGGATACGC
JMSF012L13+           GTGGAGAACACAATCGTTCCGTGAGGATCCATTATCATTATCGGAGGTTTAGGGATACGC
JMSF042J16+           GTGGAGAACACAATCGTTCCGTGAGGATCCATTATCATTATCGGAGGTTTAGGGATACGC
JMFF031A09+           GTGGAGAACACAATCGTTCCGTGAGGATCCATTATCATTATCGGAGGTTTAGGGATACGC
                      ____________________________________________________________
consensus             GTGGAGAACACAATCGTTCCGTGAGGATCCATTATCATTATCGGAGGTTTAGGGATACGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           AGAGAGGAGAGGATTTGGGTACATAAAGGAAAGAAACGGTGAGAGATTGCGTATGGCATG
JMSF051A03+           AGAGAGGAGAGGATTTGGGTAAATAAAGGAAAGAAACGGTGAGAGATTGCGTATGGCATG
JMSF047J13+           AGAGAGGAGAGGATTTGGGTACATAAAGGAAAGAAACGGTGAGAGATTACGTATGGCATG
JMFF044J21+           AGAGAGGAGAGGATTTGGGTACATAAAGGAAAGAAACGGTGAGAGATTGCGTATGGCATG
JMFS155B07+           AGAGAGGAGAGGATTTGGGTACATAAAGGAAAGAAACGGTGAGAGATTGCGTATGGCATG
JMSF012L13+           AGAGAGGAGAGGATTTGGGTACATAAAGGAAAGAAACGGTGAGAGATTGCGTATGGCATG
JMSF042J16+           AGAGAGGAGAGGATTTGGGTACATAAAGGAAAGAAACGGTGAGAGATTGCGTATGGCATG
JMFF031A09+           AGAGAGGAGAGGATTTGGGTACATAAAGGAAAGAAACGGTGAGAGATTGCGTATGGCATG
                      ____________________________________________________________
consensus             AGAGAGGAGAGGATTTGGGTACATAAAGGAAAGAAACGGTGAGAGATTGCGTATGGCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045N24+           ACATCGTCGTCGGCTCTGCTGTTCTACAATCTCCGGTAAAGGGACACGTC          
JMSF051A03+           ACATCGTCGTCGGCTCTGCTGTTCTACAATCTCCGGTAAAGGGACACGTCAAAAGTCATA
JMSF047J13+           ACATCGTCGTCGGCTCTGCTGTTCTACAATCTCCGGTAAAGGGACACGTCAAAAGTCATA
JMFF044J21+           ACATCGTCGTCGGCTCTGCTGTTCTACAATCTCCGGTAAAGGGACACGTCAAAAGTCATA
JMFS155B07+           ACATCGTCGTCGGCTCTGCTGTTCTACAATCTCCGGTAAAGGGACACGTCAAAAGTCATA
JMSF012L13+           ACATCGTCGTCGGCTCTGCTGTTCTACAATCTCCGGTAAAGGGACACGTCAAAAGTCATA
JMSF042J16+           ACATCGTCGTCGGCTCTGCTGTTCTACAATCTCCGGTAAAGGGACACGTCAAAAGTCATA
JMFF031A09+           ACATCGTCGTCGGCTCTGCTGTTCTACAATCTCCGGTAAAGGGACACGTCAAAAGTCATA
                      ____________________________________________________________
consensus             ACATCGTCGTCGGCTCTGCTGTTCTACAATCTCCGGTAAAGGGACACGTCAAAAGTCATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051A03+           TCTGTTGCCAAATGCAATTGCTAATTTGCTACTGCT                        
JMSF047J13+           TCTGTTGCCAAATGCAATTG                                        
JMFF044J21+           TCTGTTGCCAAATGCAATTGCT                                      
JMFS155B07+           TCTGTTGCCAAA                                                
JMSF012L13+           TCTGTTGCCAAATGCAATTGCTAATTTGCTACTGCT                        
JMSF042J16+           TCTGTTGCCAAATGCAATTGCTAATTTGCTACTGCT                        
JMFF031A09+           TCTGTTGCCAAATGCAATTGCTAATTTGCTACTGCTACTGCCTACTGATGAGTATGCTCT
                      ____________________________________________________________
consensus             TCTGTTGCCAAATGCAATTGCTAATTTGCTACTGCTACTGCCTACTGATGAGTATGCTCT