| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001N04 | Sequence | 195 | 012910 (6) | ref|XP_006367451.1| | 5e-13 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Solanum tuberosum] | 700 | 012470 (6) | ref|XP_009804255.1| | 2e-49 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] |
| JMFF018E20 | Sequence | 567 | 012910 (6) | ref|XP_010325561.1| | 2e-84 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Solanum lycopersicum] | 696 | 012470 (6) | ref|XP_009804255.1| | 7e-49 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] |
| JMFF023A23 | Sequence | 409 | 012910 (6) | ref|XP_009781195.1| | 5e-53 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] re | 691 | 012470 (6) | ref|XP_009804255.1| | 2e-47 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] |
| JMFF030F12 | Sequence | 515 | 012910 (6) | ref|XP_006367451.1| | 4e-32 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Solanum tuberosum] | 632 | 012470 (6) | ref|XP_009804255.1| | 9e-52 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] |
| JMFF049I05 | Sequence | 505 | 012910 (6) | ref|XP_010325561.1| | 5e-67 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Solanum lycopersicum] | 497 | 012470 (6) | ref|XP_009804255.1| | 4e-09 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] |
| JMSF033H17 | Sequence | 140 | 012910 (6) | 686 | 012470 (6) | ref|XP_009804255.1| | 2e-68 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] | |||
This contig is upended
. : . : . : . : . : . :
JMFF018E20+ GTTG
____________________________________________________________
consensus GTTG
. : . : . : . : . : . :
JMFF018E20+ AACACGAGCAGCATCTTGTGCGATTTGGCGCTGCCGTCCGCGACTAGCGGCTTGGCAATC
____________________________________________________________
consensus AACACGAGCAGCATCTTGTGCGATTTGGCGCTGCCGTCCGCGACTAGCGGCTTGGCAATC
. : . : . : . : . : . :
JMFF018E20+ ACGGGGAACTTGAGCCCCTCGGTGTCCATGTCCAAGGCCGACACCATTTGCGCGTCGTAG
JMFF049I05+ GTCCATGTCCAAGGCCGACACCATTGNCGCGTCGTAG
____________________________________________________________
consensus ACGGGGAACTTGAGCCCCTCGGTGTCCATGTCCAAGGCCGACACCATTTGCGCGTCGTAG
. : . : . : . : . : . :
JMFF018E20+ ATCACAATCTGCTTGGGAATCCCCAGCGACGCCCCCGCCTGGCAGTCCTTCACCTCCACC
JMFF049I05+ ATCACAATCTGCTTGGGAATCCCCAGCGACGCCCCCGCCTGGCAGTCCTTCACCTCCACC
JMFF023A23+ CCGCCTGGCAGTCCTTCACCTCCACC
____________________________________________________________
consensus ATCACAATCTGCTTGGGAATCCCCAGCGACGCCCCCGCCTGGCAGTCCTTCACCTCCACC
. : . : . : . : . : . :
JMFF018E20+ TGCGCCACGAACTGCAGCATGGAGATTCGGTTGTGCAGCCGCTCAATCGCCTCCGGGAAG
JMFF049I05+ TGCGCCACGAACTGCAGCATGGAGATTCGGTTGTGCAGCCGCTCAATCGCCTCCGGGAAG
JMFF023A23+ TGCGCCACGAACTGCAGCATGGAGATTCGGTTGTGCAGCCGCTCAATCGCCTCCGGGAAG
____________________________________________________________
consensus TGCGCCACGAACTGCAGCATGGAGATTCGGTTGTGCAGCCGCTCAATCGCCTCCGGGAAG
. : . : . : . : . : . :
JMFF018E20+ TCGATGATTAGGGCGCTAGGGTTCCTCGCCGCGAACTCCTGCAGCTGCCGCTTCCAATCC
JMFF049I05+ TCGATGATTAGGGCGCTAGGGTTCCTCGCCGCGAACTCCTGCAGCTGCCGCTTCCAATCC
JMFF023A23+ TCGATGATTAGGGCGCTAGGGTTCCTCGCCGCGAACTCCTGCAGCTGCCGCTTCCAATCC
JMFF030F12+ TCGCCGNGAACTCNTGCAGNTGCCGCTTCCAATCC
____________________________________________________________
consensus TCGATGATTAGGGCGCTAGGGTTCCTCGCCGCGAACTCCTGCAGCTGCCGCTTCCAATCC
. : . : . : . : . : . :
JMFF018E20+ TCCCCGTACAGCTTGTGCAGGACGCAATCGAACGGCCCCTGATCCACCAGCGCCTTCTCC
JMFF049I05+ TCCCCGTACAGCTTGTGCAGGACGCAATCGAACGGCCCCTGATCCACCAGCGCCTTCTCC
JMFF023A23+ TCCCCGTACAGCTTGTGCAGGACGCAATCGAACGGCCCCTGATCCACCAGCGCCTTCTCC
JMFF030F12+ TCCCCGTACAGCTTGTGCAGGACGCAATCGAACGGCCCNTGATCCACCAGCGCCTTCTCC
____________________________________________________________
consensus TCCCCGTACAGCTTGTGCAGGACGCAATCGAACGGCCCCTGATCCACCAGCGCCTTCTCC
. : . : . : . : . : . :
JMFF018E20+ GTGTCGATCTTCACCAGATCGATTCCCCTCTCCCTCGCCAGATTCACCAGCGACGTCTGT
JMFF049I05+ GTGTCGATCTTCACCAGATCGATTCCCCTCTCCCTCGCCAGATTCACCAGCGACGTCTGT
JMFF023A23+ GTGTCGATCTTCACCAGATCGATTCCCCTCTCCCTCGCCAGATTCACCAGCGACGTCTGT
JMFF001N04+ CTTCACCAGATCGATTCCCCTNTCCCTCGCCAGATTCACCAGNGACGTCTGT
JMFF030F12+ GTGTCGATCTTCACCAGATCGATTCCCCTCTCCCTCGCCAGATTCACCAGCGACGTCTGT
____________________________________________________________
consensus GTGTCGATCTTCACCAGATCGATTCCCCTCTCCCTCGCCAGATTCACCAGCGACGTCTGT
. : . : . : . : . : . :
JMFF018E20+ ATGAAACTCGCCTGCTTCTTCGGCGCCAAGGCGTACCCCACTCCATACCTCCCCATTCTC
JMFF049I05+ ATGAAACTCGCCTGCTTCTTCGGCGCCAAGGCGTACCCCACTCCATACCTCCCCATTCTC
JMFF023A23+ ATGAAACTCGCCTGCTTCTTCGGCGCCAAGGCGTACCCCACTCCATACCTCCCCATTCTC
JMFF001N04+ ATGAAACTCGCCTGCTTCTTCGGCGCCAAGGCGTNCCCCACTCCATACCTCCCCATTCTC
JMFF030F12+ ATGAAACTCGCCTGCTTCTTCGGCGCCAAGGCGTACCCCACTCCATACCTCCCCATTCTC
____________________________________________________________
consensus ATGAAACTCGCCTGCTTCTTCGGCGCCAAGGCGTACCCCACTCCATACCTCCCCATTCTC
. : . : . : . : . : . :
JMFF018E20+ TCCGCCATTGACACCAATCCAATCCCCTCTCCTCTCCTCTCACTCAACAACAATCTCTCA
JMFF049I05+ TCCGCCATTGACACCAATCCAATCCCCTCTCCTCTCCTCTCACTCAACAACAATCTCTCA
JMFF023A23+ TCCGCCATTGACACCAATCCAATCCCCTCTCCTCTCCTCTCACTCAACAACAATCTCTCA
JMFF001N04+ TCCGCCATTGACACCAATCCAATCCCCTCTCCTCTCCTCTCACTCAACAACAATCTCTCA
JMSF033H17+ CAATCCAATCCCNTCTCCTCTCCTCTCACTCAACAACAATCTCTCA
JMFF030F12+ TCCGCCATTGACACCAATCCAATCCCCTCTCCTCTCCTCTCATTCAACAACAATCTCTCA
____________________________________________________________
consensus TCCGCCATTGACACCAATCCAATCCCCTCTCCTCTCCTCTCACTCAACAACAATCTCTCA
. : . : . : . : . : . :
JMFF018E20+ ACAAACAAACCCCAACCCACATT
JMFF049I05+ ACAAACAAACCCCAACCCACATT
JMFF023A23+ ACAAACAAACCCCAACCCACATT
JMFF001N04+ ACAAACAAACCCCAACCCACATT
JMSF033H17+ ACAAACAAACCCCAACCCACATTACACAATTCCAATCGCACACACTCTACTTATATTAGG
JMFF030F12+ ACAAACAAACCCCAACCCACATTACACAATTCCAATCGCACACACTCTACTTATATTAGG
____________________________________________________________
consensus ACAAACAAACCCCAACCCACATTACACAATTCCAATCGCACACACTCTACTTATATTAGG
. : . : . : . : . : . :
JMSF033H17+ GTTTATTCAACCAAATTGACAGAATCTTCCCAGC
JMFF030F12+ GTTTATTCAACCAAATTGACAGAATCTTCCCAGCTTCAATACAAATGGATGACAGATACC
____________________________________________________________
consensus GTTTATTCAACCAAATTGACAGAATCTTCCCAGCTTCAATACAAATGGATGACAGATACC
. : . : . : . : . : . :
JMFF030F12+ TATATGTATAGGTGGCAGTAACTTGTATCTATCTATCTCTATCTCTCTATATATATAATA
____________________________________________________________
consensus TATATGTATAGGTGGCAGTAACTTGTATCTATCTATCTCTATCTCTCTATATATATAATA
. : . : . : . : . : . :
JMFF030F12+ TATCGATATATGTATATGTGTGTGTTTTTTTGTGTGTTTGTGTGTGTGTCAGAGATAAGC
____________________________________________________________
consensus TATCGATATATGTATATGTGTGTGTTTTTTTGTGTGTTTGTGTGTGTGTCAGAGATAAGC