Contig 012906:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021B20Sequence505012906 (4)ref|XP_009122341.1|4e-28PREDICTED: pectinesterase PPME1 [Brassica rapa] gb|AGX13882.1| pectin methyleste733012464 (3)ref|XP_011076543.1|2e-24PREDICTED: pectinesterase 1-like [Sesamum indicum]
JMFF029H08Sequence448012906 (4)ref|XP_009122341.1|9e-28PREDICTED: pectinesterase PPME1 [Brassica rapa] gb|AGX13882.1| pectin methyleste746012464 (3)ref|XP_006365350.1|4e-66PREDICTED: pectinesterase 2-like [Solanum tuberosum]
JMFF048J17Sequence454012906 (4)ref|XP_009122341.1|2e-34PREDICTED: pectinesterase PPME1 [Brassica rapa] gb|AGX13882.1| pectin methyleste394012464 (3)
JMFS065B06Sequence615012906 (4)ref|XP_009122341.1|5e-48PREDICTED: pectinesterase PPME1 [Brassica rapa] gb|AGX13882.1| pectin methyleste

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS065B06+ GATCCGGTTTACCAGAAGGCCTGGGAGCTGAATTC
                      ____________________________________________________________
consensus GATCCGGTTTACCAGAAGGCCTGGGAGCTGAATTC
 
. : . : . : . : . : . :
JMFS065B06+ TTAACGTTAATATTAACGGCCATAAAGTAATCCGACAAAACATACAAAGTGGCACTGTAT
                      ____________________________________________________________
consensus TTAACGTTAATATTAACGGCCATAAAGTAATCCGACAAAACATACAAAGTGGCACTGTAT
 
. : . : . : . : . : . :
JMFF048J17+ TATCCTTAGGATCA
JMFF021B20+ GTACCAACTTGAGCAGCCGTAGCAGCAGCATCTATAGTTGGCCTATCCTTAGGATCA
JMFS065B06+ ATGGTACCAACTTGAGCAGCCGTAGCAGCAGCATCTATAGTGGGCCTATCCTTAGGATCA
                      ____________________________________________________________
consensus ATGGTACCAACTTGAGCAGCCGTAGCAGCAGCATCTATAGTTGGCCTATCCTTAGGATCA
 
. : . : . : . : . : . :
JMFF048J17+ CCATACAAGGTGATGAAATGTTTA-CCGTAGTCGATCTTCACTCTCTCCTTATAAGTCCC
JMFF021B20+ CCATACAAGGTGATGAAATGTTTACCCGTAGTCGATCTTCACTCTCTCCTTATAAGTCCC
JMFS065B06+ CCATAGAAGGTGACGAAATGTTTA-TCGGGCTCAATCTTCACTCTCTCCTTATAAATCCC
JMFF029H08+ ATCTTCACTCTCTCCTTATAAGTCCC
                      ____________________________________________________________
consensus CCATACAAGGTGATGAAATGTTTA-CCGTAGTCGATCTTCACTCTCTCCTTATAAGTCCC
 
. : . : . : . : . : . :
JMFF048J17+ ACCTGCTATGTTAATGATATAACGCTTTGTGTTTTTAGCAGGAATGGAGTTGATGGCTTC
JMFF021B20+ ACCTGCTATGTTAATGATATAACGCTTTGTGTTTTTAGCAGGAATGGAGTTGATGGCTTC
JMFS065B06+ ACCTGCTATGTTAATGATATGACGCTTTGTGTTCTTATGAGGAATGGAGTTGACGGCTTC
JMFF029H08+ ACCTGCTATGTTAATGATATAACGCTTTGTGTTTTTAGCAGGAATGGAGTTGATGGCTTC
                      ____________________________________________________________
consensus ACCTGCTATGTTAATGATATAACGCTTTGTGTTTTTAGCAGGAATGGAGTTGATGGCTTC
 
. : . : . : . : . : . :
JMFF048J17+ TTGAATGGTTTTGAATTTGCCTCCTTTTCCGACCCCAATGTGCACTGGGGCGGCCTCCGC
JMFF021B20+ TTGAATGGTTTTGAATTTGCCTCCTTTTCCGACCCCAATGTGCACTGGGGCGGCCTCCGC
JMFS065B06+ TTGAATGGTTTTGAATTTGCCTCCTTTTCCGACCGCAATGTGCACCGGGGCGGCCTCCGC
JMFF029H08+ TTGAATGGTTTTGAATTTGCCTCCTTTTCCGACCCCAATGTGCACTGGGGCGGCCTCCGC
                      ____________________________________________________________
consensus TTGAATGGTTTTGAATTTGCCTCCTTTTCCGACCCCAATGTGCACTGGGGCGGCCTCCGC
 
. : . : . : . : . : . :
JMFF048J17+ CGTTGTGAGGGCGGGGTCCAAACCCTTTCTGCCTGGAAGGGGTTGAACGTTGGCTTTGAA
JMFF021B20+ CGTTGTGAGGGCGGGGTCCAAACCCTTTCTGCCTGGAAGGGGTTGAACGTTGGCTTTGAA
JMFS065B06+ CGCTGTGAGGGCAGGGTCCAATCCCTTTCTGCCTGGAAGGGGTTGAACGTTGGCTTTGAA
JMFF029H08+ CGTTGTGAGGGCGGGGTCCAAACCCTTTCTGCCTGGAAGGGGTTGAACGTTGGCTTTGAA
                      ____________________________________________________________
consensus CGTTGTGAGGGCGGGGTCCAAACCCTTTCTGCCTGGAAGGGGTTGAACGTTGGCTTTGAA
 
. : . : . : . : . : . :
JMFF048J17+ CCAACCCTCTACCGCAGACTTTTGTTGAGGAATAGGAGCCATGTCGTCTGAGGTAACACT
JMFF021B20+ CCAACCCTCTACCGCAGACTTTTGTTGAGGAATAGGAGCCATGTCGTCTGAGGTAACACT
JMFS065B06+ CCAACCCTCTACCTCAGACTTTTGTTGAGGAATAGGAACCATGTCGTTTGAGGTAACACT
JMFF029H08+ CCAACCCTCTACCGCAGACTTTTGTTGAGGAATAGGAGCCATGTCGTCTGAGGTAACACT
                      ____________________________________________________________
consensus CCAACCCTCTACCGCAGACTTTTGTTGAGGAATAGGAGCCATGTCGTCTGAGGTAACACT
 
. : . : . : . : . : . :
JMFF048J17+ GCCCGGACAAAACGCTACAAATACACAGACAATAAGACTAACAACAACATTTATTGCTAC
JMFF021B20+ GCCCGGACAAAACGCTACAAATACACAGACAATAAGACTAACAACAACATTTATTGCTAC
JMFS065B06+ GCCTGGACAAAACACTACAACTACACAAACAATAACAATAACAACAACATTTATTACTAC
JMFF029H08+ GCCCGGACAAAACGCTACAAATACACAGACAATAAGACTAACAACAACATTTATTGCTAC
                      ____________________________________________________________
consensus GCCCGGACAAAACGCTACAAATACACAGACAATAAGACTAACAACAACATTTATTGCTAC
 
. : . : . : . : . : . :
JMFF048J17+ TGTGTTTGTCGCCATGC
JMFF021B20+ TGTGTTTGTCGCCATGC
JMFS065B06+ TGTGTTTGTCGCCATGC
JMFF029H08+ TGTGTTTGTCGCCATGCGAACGATGCAATGCTCACAAGTGCTGTTTTTTTTAAATGGGTT
                      ____________________________________________________________
consensus TGTGTTTGTCGCCATGCGAACGATGCAATGCTCACAAGTGCTGTTTTTTTTAAATGGGTT
 
. : . : . : . : . : . :
JMFF029H08+ TTTGTTTTTATTGGATAATATGAAGATGTTTTTGCAAATGAATGCGTTATATATCTGCTT
                      ____________________________________________________________
consensus TTTGTTTTTATTGGATAATATGAAGATGTTTTTGCAAATGAATGCGTTATATATCTGCTT