Contig 012901:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027O15Sequence478012901 (2)ref|XP_010464286.1|2e-12PREDICTED: probable histone-arginine methyltransferase 1.3 isoform X2 [Camelina626012901 (2)ref|XP_010464286.1|2e-22PREDICTED: probable histone-arginine methyltransferase 1.3 isoform X2 [Camelina

Alignment

This contig is upended


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rJMFF027O15-                                        ATTTTCCTGTACAAACTTTTCTACTAGTGT
                      ____________________________________________________________
consensus                                           ATTTTCCTGTACAAACTTTTCTACTAGTGT
 
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rJMFF027O15-          CTTGGCTTGAACTACAATTGGTATCGCAAGCATAAAGACATCAAAGACATTGTCATCTAG
                      ____________________________________________________________
consensus             CTTGGCTTGAACTACAATTGGTATCGCAAGCATAAAGACATCAAAGACATTGTCATCTAG
 
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rJMFF027O15-          TAAAAGAATGGTGACCGAAATGTTTACCCATTGGCTCAGAAATTAAAATATCTGCTTTCT
                      ____________________________________________________________
consensus             TAAAAGAATGGTGACCGAAATGTTTACCCATTGGCTCAGAAATTAAAATATCTGCTTTCT
 
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rJMFF027O15-          CTGGTAACTCAACATCTTCAACATTTCCCTTTATTACTGTAATTCTTTCAGCATATAATA
JMFF027O15+            TGGTAACTCAACATNTTCAACATTTCCCTTTATTACTGTAATTCTTTCAGCATATAATA
                      ____________________________________________________________
consensus             CTGGTAACTCAACATCTTCAACATTTCCCTTTATTACTGTAATTCTTTCAGCATATAATA
 
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rJMFF027O15-          GATTGCCCGCAATCAACTTTCAGGCATATTCTACCATTTTAGATGCTTCTACAGCATAAA
JMFF027O15+           GATTGCCCGCAATCAACTTTCAGGCATATTNTACCATTTTAGATGCTTTTACAGCATAAA
                      ____________________________________________________________
consensus             GATTGCCCGCAATCAACTTTCAGGCATATTCTACCATTTTAGATGCTTTTACAGCATAAA
 
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rJMFF027O15-          CATGTTTTGCACCAGCCTGCTAAGTCTATTAATACAACCAATTTTTTGTCTAGCTTTTAC
JMFF027O15+           CATGTTTTGCNCCAGCCTGCTAAGTNTATTAATACAACCAATTTTTTGTNTAGCTTTTAC
                      ____________________________________________________________
consensus             CATGTTTTGCACCAGCCTGCTAAGTCTATTAATACAACCAATTTTTTGTCTAGCTTTTAC
 
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rJMFF027O15-          AGATTGCAGTTTGCTCATTAGCAATTCGACACAAGTGTGCCTGCAAAAATCATCTGTCTT
JMFF027O15+           AGATTGCAGTTTGCTCATTAGCAATTCGACACAAGTGTGCCTGCAAAAATCATCTGTNTT
                      ____________________________________________________________
consensus             AGATTGCAGTTTGCTCATTAGCAATTCGACACAAGTGTGCCTGCAAAAATCATCTGTCTT
 
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rJMFF027O15-          CATCAAATCACATGTATCAAAAACAGGGGGATGATGTTCCTGAAGAGATTCAACTATTGC
JMFF027O15+           CATCAAATCACATGTATCAAAAACAGGGGGATGATGTTCCTGAAGAGATTCAACTATTGC
                      ____________________________________________________________
consensus             CATCAAATCACATGTATCAAAAACAGGGGGATGATGTTCCTGAAGAGATTCAACTATTGC
 
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rJMFF027O15-          ATGCACAAGGTTAAAAAGAAGAAAAAATCACATGTAAAGGATGGATGTTGTTTCTTCTTC
JMFF027O15+           ATGCNCAAGGTTAAAAAGAAGAAAAAATCNCATGT-AAGGATGGATGTTGTTTNTTNTTC
                      ____________________________________________________________
consensus             ATGCACAAGGTTAAAAAGAAGAAAAAATCACATGTAAAGGATGGATGTTGTTTCTTCTTC
 
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rJMFF027O15-          TTAGCAAGCACACATTCTTCTTAGCAAAAAAAAAATACATGTCGGCTGTCGCCAAGCCGT
JMFF027O15+           TTAGCAAGCNCACATTNTTNTTAGCAAAAAAAAAATACATGTCGGCTGTCGCCAAGCCGT
                      ____________________________________________________________
consensus             TTAGCAAGCACACATTCTTCTTAGCAAAAAAAAAATACATGTCGGCTGTCGCCAAGCCGT
 
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rJMFF027O15-          TGTTCGTTGGANACTGGAATAGTGCCCTCGTCACTCGCAGGCTTCGTCGGACTCGT    
JMFF027O15+           TGTTCGTTGGAGACTGGAATAGTGCCCTCGTCACTCGCAGGCTTCGTCGGACTCGTTGCT
                      ____________________________________________________________
consensus             TGTTCGTTGGAGACTGGAATAGTGCCCTCGTCACTCGCAGGCTTCGTCGGACTCGTTGCT