Contig 012899:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027J18Sequence520012899 (3)ref|XP_009630854.1|7e-29PREDICTED: ran-binding protein 10 isoform X2 [Nicotiana tomentosiformis]576010009 (3)ref|XP_009769202.1|4e-38PREDICTED: ran-binding protein 10 [Nicotiana sylvestris]
JMSF031B02Sequence621012899 (3)ref|XP_009630854.1|7e-68PREDICTED: ran-binding protein 10 isoform X2 [Nicotiana tomentosiformis]676010009 (3)ref|XP_009769202.1|1e-51PREDICTED: ran-binding protein 10 [Nicotiana sylvestris]
JMSF032F01Sequence696012899 (3)ref|XP_009630854.1|4e-69PREDICTED: ran-binding protein 10 isoform X2 [Nicotiana tomentosiformis]704010009 (3)ref|XP_009769202.1|3e-60PREDICTED: ran-binding protein 10 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031B02+ GNNGCATAATGATGCCTCCACCAACAGTATCACNTGTNGTATAAGTTGGAC
JMSF032F01+ TGATGCCTCCACCAACAGTATCACCTGTTGTATAAGTTGGAC
                      ____________________________________________________________
consensus GNNGCATAATGATGCCTCCACCAACAGTATCACCTGTTGTATAAGTTGGAC
 
. : . : . : . : . : . :
JMSF031B02+ CAAATACCTCCCCCTTTCCATGTCCACGATAAAGCAAGCCATCATCACCATGATACCCAT
JMSF032F01+ CAAATACCTCCCCCTTTCCATGTCCACGATAAAGCAAGCCATCATCACCATGATACCCAT
                      ____________________________________________________________
consensus CAAATACCTCCCCCTTTCCATGTCCACGATAAAGCAAGCCATCATCACCATGATACCCAT
 
. : . : . : . : . : . :
JMSF031B02+ AACTGTTTGCTTCCCAGCCCGGTTGGCGGCACATTTTGAAGCCGGAAGTGGTGAAACCGA
JMSF032F01+ AACTGTTTGCTTCCCAGCCCGGTTGGCGGCACATTTTGAAGCCGGAAGTGGTGAAACCGA
                      ____________________________________________________________
consensus AACTGTTTGCTTCCCAGCCCGGTTGGCGGCACATTTTGAAGCCGGAAGTGGTGAAACCGA
 
. : . : . : . : . : . :
JMSF031B02+ TGGCAATCTGACCCTTGGCTCCAGCATTCTTGACATAGATCTCGAAATAGTAAACGAGGC
JMSF032F01+ TGGCAATCTGACCCTTGGCTCCAGCATTCTTGACATAGATCTCGAAATAGTAAACGAGGC
JMFF027J18+ CCAGCATTCTTGACATAGATCTCGAAATAGTAAACGAGGC
                      ____________________________________________________________
consensus TGGCAATCTGACCCTTGGCTCCAGCATTCTTGACATAGATCTCGAAATAGTAAACGAGGC
 
. : . : . : . : . : . :
JMSF031B02+ GCTTGGAAGGGGCGGGCCGATTGGCCTGGACGACGCCGACATCGTGGCCGTGGAGGTTCA
JMSF032F01+ GCTTGGAAGGGGCGGGCCGATTGGCCTGGACGACGCCGACATCGTGGCCGTGGAGGTTCA
JMFF027J18+ GCTTGGAAGGGGCGGGCCGATTGGCCTGGACGACGCCGACATCGTGGCCGTGGAGGTTCA
                      ____________________________________________________________
consensus GCTTGGAAGGGGCGGGCCGATTGGCCTGGACGACGCCGACATCGTGGCCGTGGAGGTTCA
 
. : . : . : . : . : . :
JMSF031B02+ CGTTCGGGTACTGAACCGAGAGCTTGTCGGGCCCGACGACGGAGAACCCGCCGGAGCTGT
JMSF032F01+ CGTTCGGGTACTGAACCGAGAGCTTGTCGGGCCCGACGACGGAGAACCCGCCGGAGCTGT
JMFF027J18+ CGTTCGGGTACTGAACCGAGAGCTTGTCGGGCCCGACGACGGAGAACCCGCCGGAGCTGT
                      ____________________________________________________________
consensus CGTTCGGGTACTGAACCGAGAGCTTGTCGGGCCCGACGACGGAGAACCCGCCGGAGCTGT
 
. : . : . : . : . : . :
JMSF031B02+ TGAGCGTGTCGAGCTCCGTCGGCGGCTCCTCCCTTTCCTCCTCATCACCCTCCACTACAT
JMSF032F01+ TGAGCGTGTCGAGCTCCGTCGGCGGCTCCTCCCTTTCCTCCTCATCACCCTCCACTACAT
JMFF027J18+ TGAGCGTGTCGAGCTCCGTCGGCGGCTCCTCCCTTTCCTCCTCATCACCCTCCACTACAT
                      ____________________________________________________________
consensus TGAGCGTGTCGAGCTCCGTCGGCGGCTCCTCCCTTTCCTCCTCATCACCCTCCACTACAT
 
. : . : . : . : . : . :
JMSF031B02+ CCGAGGACTGCACTGCTTCCATGGCTTCCCCGGCGGATTCGAATCTGGCGGCGGCGGCTT
JMSF032F01+ CCGAGGACTGCACTGCTTCCATGGCTTCCCCGGCGGATTCGAATCTGGCGGCGGCGGCTT
JMFF027J18+ CCGAGGACTGCACTGCTTCCATGGCTTCCCCGGCGGATTCGAATCTGGCGGCGGCGGCTT
                      ____________________________________________________________
consensus CCGAGGACTGCACTGCTTCCATGGCTTCCCCGGCGGATTCGAATCTGGCGGCGGCGGCTT
 
. : . : . : . : . : . :
JMSF031B02+ TGGAGTTGAGCCGCCAGAGTTCTAGGAAGTAGGAGCCGATCAATTCTTGATTCTGGGAGC
JMSF032F01+ TGGAGTTGAGCCGCCAGAGTTCTAGGAAGTAGGAGCCGATCAATTCTTGATTCTGGGAGC
JMFF027J18+ TGGAGTTGAGCCGCCAGAGTTCTAGGAAGTAGGAGCCGATCAATTCTTGATTCTGGGAGC
                      ____________________________________________________________
consensus TGGAGTTGAGCCGCCAGAGTTCTAGGAAGTAGGAGCCGATCAATTCTTGATTCTGGGAGC
 
. : . : . : . : . : . :
JMSF031B02+ AATTAATGTCCTGAGCCATTACAGAGAGCTATGAGAGCATAAAATCAGATTTGAACCCTA
JMSF032F01+ AATTAATGTCCTGAGCCATTACAGAGAGCTATGAGAGCATAAAATCAGATTTGAACCCTA
JMFF027J18+ AATTAATGTCCTGAGCCATTACAGAGAGCTATGAGAGCATAAAATCAGATTTGAACCCTA
                      ____________________________________________________________
consensus AATTAATGTCCTGAGCCATTACAGAGAGCTATGAGAGCATAAAATCAGATTTGAACCCTA
 
. : . : . : . : . : . :
JMSF031B02+ GGAAACGAGGCGGAAGAGATGATGATAGC
JMSF032F01+ GGAAACGAGGCGGAAGAGATGATGATAGCAAGCTTGGGAGACGCAGTGAAGAGCGCTTAT
JMFF027J18+ GGAAACGAGGCGGAAGAGATGATGATAGCAAGCTTGGGAGACGCAGTGAAGAGCGCTTAT
                      ____________________________________________________________
consensus GGAAACGAGGCGGAAGAGATGATGATAGCAAGCTTGGGAGACGCAGTGAAGAGCGCTTAT
 
. : . : . : . : . : . :
JMSF032F01+ CGGAAAAGCAATGGAGGCTTTCTTCGACGAAGGGCTAAAGGTCAGGCCGC
JMFF027J18+ CGGAAAAGCAATGGAGGCTTTCTTCGACGAAGGGCTAAAGGTCAGGCCGCAGCCAATTCC
                      ____________________________________________________________
consensus CGGAAAAGCAATGGAGGCTTTCTTCGACGAAGGGCTAAAGGTCAGGCCGCAGCCAATTCC