Contig 012895:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027B19Sequence557012895 (3)ref|XP_009598950.1|2e-85PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal isoform X1 [Nicotiana tomento593008498 (2)ref|XP_011095026.1|4e-93PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal [Sesamum indicum]
JMFN009M14Sequence618012895 (3)gb|KCW88138.1|7e-127hypothetical protein EUGRSUZ_A00529 [Eucalyptus grandis]
JMSF018D18Sequence532012895 (3)ref|XP_009598950.1|2e-81PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal isoform X1 [Nicotiana tomento785008498 (2)ref|XP_011095026.1|5e-131PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal [Sesamum indicum]

Alignment

This contig is upended


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JMFN009M14+                                                       TCTTTACTATGAATCC
                      ____________________________________________________________
consensus                                                         TCTTTACTATGAATCC
 
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JMFN009M14+           ATTTATCTGGTTTGTACTGGCATTTCTAGCAAAAATGACAAGTATATCTGCAAAAGTACT
                      ____________________________________________________________
consensus             ATTTATCTGGTTTGTACTGGCATTTCTAGCAAAAATGACAAGTATATCTGCAAAAGTACT
 
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JMFN009M14+           GTTTCCAATCCACCGTTTTTGGCCTTCAATGATCCAACCTCCTTCAACCTTTGTTGCAAT
                      ____________________________________________________________
consensus             GTTTCCAATCCACCGTTTTTGGCCTTCAATGATCCAACCTCCTTCAACCTTTGTTGCAAT
 
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JMFN009M14+           TGTTTTCAATGAACTTGCATCACTCCCATACTCCGGTTCTGTAAGACCCCAACAACCAAT
                      ____________________________________________________________
consensus             TGTTTTCAATGAACTTGCATCACTCCCATACTCCGGTTCTGTAAGACCCCAACAACCAAT
 
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JMFN009M14+           AGTGTCAAGCTTGGCCAATGATGGTAAATACTTTTGCTTTTGTATCTCTGACCCACAAAG
JMFF027B19+                                                      ATCTCTGACCCACAAAG
                      ____________________________________________________________
consensus             AGTGTCAAGCTTGGCCAATGATGGTAAATACTTTTGCTTTTGTATCTCTGACCCACAAAG
 
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JMFN009M14+           TCCAATGGTTAGCATAGCTAATGAAGAATGAACCAGAATGAAAGTTGAGCAGCTGGCATC
JMSF018D18+              AATGGTTAGCATAGCTAATGAAGAATGAACCAGAATGAAAGTTGAGCAGCTGGCATC
JMFF027B19+           TCCAATGGTTAGCATAGCTAATGAAGAATGAACCAGAATGAAAGTTGAGCAGCTGGCATC
                      ____________________________________________________________
consensus             TCCAATGGTTAGCATAGCTAATGAAGAATGAACCAGAATGAAAGTTGAGCAGCTGGCATC
 
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JMFN009M14+           AACTCTAGAAACTTCTGCCGTAGCAATGGCACTTGCAGTCACAGAGAGTCCAGGACAGCC
JMSF018D18+           AACTCTAGAAACTTCTGCCGTAGCAATGGCACTTGCAGTCACAGAGAGTCCAGGACAGCC
JMFF027B19+           AACTCTAGAAACTTCTGCCGTAGCAATGGCACTTGCAGTCACAGAGAGTCCAGGACAGCC
                      ____________________________________________________________
consensus             AACTCTAGAAACTTCTGCCGTAGCAATGGCACTTGCAGTCACAGAGAGTCCAGGACAGCC
 
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JMFN009M14+           ATACCCCTTGATGGTGCCACCAGCAACTCCTAAAGCACCAAGTTTTGGAATCACTTCAAA
JMSF018D18+           ATACCCCTTGATGGTGCCACCAGCAACTCCTAAAGCACCAAGTTTTGGAATCACTTCAAA
JMFF027B19+           ATACCCCTTGATGGTGCCACCAGCAACTCCTAAAGCACCAAGTTTTGGAATCACTTCAAA
                      ____________________________________________________________
consensus             ATACCCCTTGATGGTGCCACCAGCAACTCCTAAAGCACCAAGTTTTGGAATCACTTCAAA
 
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JMFN009M14+           TGGAAACTCAGCCTTTTCCCAATACTTTGCCATTAAAGGTGCTACATCTCTTTCCATGCA
JMSF018D18+           TGGAAACTCAGCCTTTTCCCAATACTTTGCCATTAAAGGTGCTACATCTCTTTCCATGCA
JMFF027B19+           TGGAAACTCAGCCTTTTCCCAATACTTTGCCATTAAAGGTGCTACATCTCTTTCCATGCA
                      ____________________________________________________________
consensus             TGGAAACTCAGCCTTTTCCCAATACTTTGCCATTAAAGGTGCTACATCTCTTTCCATGCA
 
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JMFN009M14+           TTCTCTCACTCTCATTCTGACACTTTGCTCAGCGGGAGTGAGTAGATCATCAAACTGATA
JMSF018D18+           TTCTCTCACTCTCATTCTGACACTTTGCTCAGCGGGAGTGAGTAGATCATCAAACTGATA
JMFF027B19+           TTCTCTCACTCTCATTCTGACACTTTGCTCAGCGGGAGTGAGTAGATCATCAAACTGATA
                      ____________________________________________________________
consensus             TTCTCTCACTCTCATTCTGACACTTTGCTCAGCGGGAGTGAGTAGATCATCAAACTGATA
 
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JMFN009M14+           ATAGTCAGATGTGCACGGAGGAAACTTTGAAGCTGGAGTTGCTTGGGGAAATGCAACAGA
JMSF018D18+           ATAGTCAGATGTGCACGGAGGAAACTTTGAAGCTGGAGTTGCTTGGGGAAATGCAACAGA
JMFF027B19+           ATAGTCAGATGTGCACGGAGGAAACTTTGAAGCTGGAGTTGCTTGGGGAAATGCAACAGA
                      ____________________________________________________________
consensus             ATAGTCAGATGTGCACGGAGGAAACTTTGAAGCTGGAGTTGCTTGGGGAAATGCAACAGA
 
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JMFN009M14+           AA                                                          
JMSF018D18+           AACATCCAAAGCAGGTAAATCAAAATACGAGCTTTTTGCATCCTTGTGCTTTTGCTCTTG
JMFF027B19+           AACATCCAAAGCAGGTAAATCAAAATACGAGCTTTTTGCATCCTTGTGCTTTTGCTCTTG
                      ____________________________________________________________
consensus             AACATCCAAAGCAGGTAAATCAAAATACGAGCTTTTTGCATCCTTGTGCTTTTGCTCTTG
 
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JMSF018D18+           GGTTTCAGATGAAGGAACTTTCATGGTGATCTGTGAAGCAGAATGCAGAGAAAGACGCCG
JMFF027B19+           GGTTTCAGATGAAGGAACTTTCATGGTGATCTGTGAAGCAGAATGCAGAGAAAGACGCCG
                      ____________________________________________________________
consensus             GGTTTCAGATGAAGGAACTTTCATGGTGATCTGTGAAGCAGAATGCAGAGAAAGACGCCG
 
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JMSF018D18+           GACAAGGAGAAGAAAGAAGAATGCTAACGGAACTGTTTGCTTGTGAGATGTTCC      
JMFF027B19+           GACAAGGAGAAGAAAGAAGAATGCTAACGGAACTGTTTGCTTGTGAGATGTTCCAAAGAG
                      ____________________________________________________________
consensus             GACAAGGAGAAGAAAGAAGAATGCTAACGGAACTGTTTGCTTGTGAGATGTTCCAAAGAG