Contig 012894:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026J21Sequence535012894 (2)ref|XP_006345423.1|4e-41PREDICTED: cytochrome b5 reductase 4-like [Solanum tuberosum]768012894 (2)gb|KDP43557.1|6e-71hypothetical protein JCGZ_16844 [Jatropha curcas]

Alignment

This contig is upended


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rJMFF026J21-                                                              AATGCCAT
                      ____________________________________________________________
consensus                                                                 AATGCCAT
 
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rJMFF026J21-          GAGCAGATAAACTTACATTAGCAAATTCCAAGAGCAGAAATAGTTGTACAACACTTCAAG
                      ____________________________________________________________
consensus             GAGCAGATAAACTTACATTAGCAAATTCCAAGAGCAGAAATAGTTGTACAACACTTCAAG
 
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rJMFF026J21-          AAGTTGTTTCTTTGTTTTTCATTTTCTTTTCTTATCTTTTTCTATTTTTCCTCATATTAA
                      ____________________________________________________________
consensus             AAGTTGTTTCTTTGTTTTTCATTTTCTTTTCTTATCTTTTTCTATTTTTCCTCATATTAA
 
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rJMFF026J21-          AATGAAATGAACTAGCACAACAATTCCCATTCTTAGGGTTTTTATCTAAAAACCAAATTG
                      ____________________________________________________________
consensus             AATGAAATGAACTAGCACAACAATTCCCATTCTTAGGGTTTTTATCTAAAAACCAAATTG
 
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rJMFF026J21-          TAGATTCTTCTGCCAACATTTTATTTTTCACAGCGAATAAGGCAAACAATTTAAGGCCTT
                      ____________________________________________________________
consensus             TAGATTCTTCTGCCAACATTTTATTTTTCACAGCGAATAAGGCAAACAATTTAAGGCCTT
 
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rJMFF026J21-          TATTTAAAGAAGATAAATATGCCTTCTCTTCAAGGTCAGAATGCTGGAGATGATTATACT
                      ____________________________________________________________
consensus             TATTTAAAGAAGATAAATATGCCTTCTCTTCAAGGTCAGAATGCTGGAGATGATTATACT
 
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rJMFF026J21-          TTTTGCTGAGAATCATACTTGAATCTTGTAATACAAACATCTTCACTGGCTCTCATCTAG
                      ____________________________________________________________
consensus             TTTTGCTGAGAATCATACTTGAATCTTGTAATACAAACATCTTCACTGGCTCTCATCTAG
 
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rJMFF026J21-          AATGCCAACAAGACACTTCTCCAATAAAAATTCTGCATTAACCCAGGCATGGTATTTATT
                      ____________________________________________________________
consensus             AATGCCAACAAGACACTTCTCCAATAAAAATTCTGCATTAACCCAGGCATGGTATTTATT
 
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rJMFF026J21-          GAATAAAGCTGTGCAATCTTTTCCAACAGCCTTCATCAGCATGTCAACACCTCCTGGATG
                      ____________________________________________________________
consensus             GAATAAAGCTGTGCAATCTTTTCCAACAGCCTTCATCAGCATGTCAACACCTCCTGGATG
 
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rJMFF026J21-          AAATTTCATATATGGTGATACATTGTAAACACGGCCTTTAAGAACAGTCCACATTGAACC
                      ____________________________________________________________
consensus             AAATTTCATATATGGTGATACATTGTAAACACGGCCTTTAAGAACAGTCCACATTGAACC
 
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rJMFF026J21-          CTCATTTTGGTGCTGTTTAACTTCATTTATAGATATGAGTCGTCTATTTGAAAGCCCTCT
                      ____________________________________________________________
consensus             CTCATTTTGGTGCTGTTTAACTTCATTTATAGATATGAGTCGTCTATTTGAAAGCCCTCT
 
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rJMFF026J21-          CAGTCCTGCAAGGTCAGGGTGTGTTGTTGTAAGCTTAAGCCAGTCCATCTGGCTATACCC
JMFF026J21+               CCTGCAAGGTCAGGGTGTGTTGTTGTAAGCTTAAGCCAGTCCATCTGGCTATACCC
                      ____________________________________________________________
consensus             CAGTCCTGCAAGGTCAGGGTGTGTTGTTGTAAGCTTAAGCCAGTCCATCTGGCTATACCC
 
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rJMFF026J21-          TTTCTCAAAAGGCACTTTTTGCTCGAGGTGCAGGCTTCCTTGCAGAACTTATTGGCCCCT
JMFF026J21+           TTTCTCAAAAGGCAC-TTTTGCTCGAGGTGCAGGCTTCCTTGCAGAACTTATTGGCCCCT
                      ____________________________________________________________
consensus             TTTCTCAAAAGGCACTTTTTGCTCGAGGTGCAGGCTTCCTTGCAGAACTTATTGGCCCCT
 
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rJMFF026J21-          GTGAAGCTTT-ACTGGAGTCTTAATGNTTCCTGATGCTCCT                   
JMFF026J21+           GTGAAGCTTTAACTGGAGTCTTAGTGTTTCCTGATGCTCCTTGGCTAGAACTTCCACTCA
                      ____________________________________________________________
consensus             GTGAAGCTTTAACTGGAGTCTTAGTGTTTCCTGATGCTCCTTGGCTAGAACTTCCACTCA
 
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JMFF026J21+           CTTGTTTTTGAGAAGTGTCTATAACGTTGAAAGATAAAGAACCAACTGTCCCCTGCTTGT
                      ____________________________________________________________
consensus             CTTGTTTTTGAGAAGTGTCTATAACGTTGAAAGATAAAGAACCAACTGTCCCCTGCTTGT
 
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JMFF026J21+           TTGAGGTAGCAGTACTTGGCAATTTGTCCTGCCAAAAGTCACCATTACTCTGGCTAGCAG
                      ____________________________________________________________
consensus             TTGAGGTAGCAGTACTTGGCAATTTGTCCTGCCAAAAGTCACCATTACTCTGGCTAGCAG
 
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JMFF026J21+           CAACACAATTTGACGGGTTGTCTTCTATTGTGATTCCATTTATATCTTGAACAACCTTTT
                      ____________________________________________________________
consensus             CAACACAATTTGACGGGTTGTCTTCTATTGTGATTCCATTTATATCTTGAACAACCTTTT
 
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JMFF026J21+           CTGCTTCAGTACCCTCTTGGTAATTTGGGCCAGCAACCTGACAAAATGTGAAATCATCAT
                      ____________________________________________________________
consensus             CTGCTTCAGTACCCTCTTGGTAATTTGGGCCAGCAACCTGACAAAATGTGAAATCATCAT
 
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JMFF026J21+           CATTAGCCATTCCAAACAGGAACCAGCCTCAATGTCTCCAAAAACTAATCCTGCCTGTAT
                      ____________________________________________________________
consensus             CATTAGCCATTCCAAACAGGAACCAGCCTCAATGTCTCCAAAAACTAATCCTGCCTGTAT
 
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JMFF026J21+           GTATAAAAATGGAAAATATATATCTACACCTTCACATGCATATGGAAAGAGAGATGGCTT
                      ____________________________________________________________
consensus             GTATAAAAATGGAAAATATATATCTACACCTTCACATGCATATGGAAAGAGAGATGGCTT