Contig 012891:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026A12Sequence538012891 (2)ref|XP_010094353.1|3e-06GPN-loop GTPase 2 [Morus notabilis] gb|EXB55841.1| GPN-loop GTPase 2 [Morus nota732011076 (3)ref|XP_011099332.1|1e-92PREDICTED: GPN-loop GTPase 2 isoform X1 [Sesamum indicum]
JMFS065F05Sequence642012891 (2)gb|KJB63612.1|2e-32hypothetical protein B456_010G026000 [Gossypium raimondii]

Alignment

This contig is upended


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JMFS065F05+               AACCATCACATCACTCAGTTTAACGAGATCCTCAATATTAATAGCACACTCGTATG
                      ____________________________________________________________
consensus                 AACCATCACATCACTCAGTTTAACGAGATCCTCAATATTAATAGCACACTCGTATG
 
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JMFS065F05+           GCAAAGAATCATNTGCAGGATCCAAGTTAATTACAGCAACTTTCCGGCCAATGAGTTGGA
                      ____________________________________________________________
consensus             GCAAAGAATCATNTGCAGGATCCAAGTTAATTACAGCAACTTTCCGGCCAATGAGTTGGA
 
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JMFS065F05+           GAAACTGAGACATGCCATTGCAATAAGTGGTTTTGCCGGAGCCCGGCGGCCCAATCACTA
JMFF026A12+             AACTGAGACATGCCATTGCAATAAGTGGTTTTGCCGGAGCCCGGCGGCCCAATCACTA
                      ____________________________________________________________
consensus             GAAACTGAGACATGCCATTGCAATAAGTGGTTTTGCCGGAGCCCGGCGGCCCAATCACTA
 
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JMFS065F05+           TCTGACCGAACACCATTCCTGTTATATGGAATTACCTTTTTTGCTCTCGGATACGCGAAC
JMFF026A12+           TCTGACCGAACACCATTCCTGTTATATGGAATTACCTTTTTTGCTCTCGGATACGCGAAC
                      ____________________________________________________________
consensus             TCTGACCGAACACCATTCCTGTTATATGGAATTACCTTTTTTGCTCTCGGATACGCGAAC
 
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JMFS065F05+           TATGAGCTTAAGTGTTCGCTTCAATTTCGCCGAGGGTGAAAAGTAATCAAACACCTATCT
JMFF026A12+           TATGAGCTTAAGTGTTCGCTTCAATTTCGCCGAGGGTGAAAAGTAATCAAACACCTATCT
                      ____________________________________________________________
consensus             TATGAGCTTAAGTGTTCGCTTCAATTTCGCCGAGGGTGAAAAGTAATCAAACACCTATCT
 
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JMFS065F05+           ATTACCAAACTTTTGTAATTTGACTAGGTTTGGACTATAATAACTAGAAGTTGTTTACTT
JMFF026A12+           ATTACCAAACTTTTGTAATTTGACTAGGTTTGGACTATAATAACTAGAAGTTGTTTACTT
                      ____________________________________________________________
consensus             ATTACCAAACTTTTGTAATTTGACTAGGTTTGGACTATAATAACTAGAAGTTGTTTACTT
 
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JMFS065F05+           GAACCAAGACTAACTGCTATTATTCTGAATGTCTACCATTTAAGAAGGCATGATATCAAC
JMFF026A12+           GAACCAAGACTAACTGCTATTATTCTGAATGTCTACCATTTAAGAAGGCATGATATCAAC
                      ____________________________________________________________
consensus             GAACCAAGACTAACTGCTATTATTCTGAATGTCTACCATTTAAGAAGGCATGATATCAAC
 
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JMFS065F05+           TTGCGTGGACGATGCTATTGAGCCAAGCTAATAAATTGTGGACAATACTAAAAATACACA
JMFF026A12+           TTGCGTGGACGATGCTATTGAGCCAAGCTAATAAATTGTGGACAATACTAAAAATACACA
                      ____________________________________________________________
consensus             TTGCGTGGACGATGCTATTGAGCCAAGCTAATAAATTGTGGACAATACTAAAAATACACA
 
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JMFS065F05+           ATTTATTAGCTGAACTCTAGATGGTGTAATGAGCCAAGCTTGGGTGGACGATGTCGATCT
JMFF026A12+           ATTTATTAGCTGAACTCTAGATGGTGTAATGAGCCAAGCTTGGGTGGACGATGTCGATCT
                      ____________________________________________________________
consensus             ATTTATTAGCTGAACTCTAGATGGTGTAATGAGCCAAGCTTGGGTGGACGATGTCGATCT
 
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JMFS065F05+           TTGGGTGTCGACGACGAGACTTGGAGTCGCGGCCGGGGTCTCGACTGGCTGGGCTTCCCG
JMFF026A12+           TTGGGTGTCGACGACGAGACTTGGAGTCGCGGCCGGGGTCTCGACTGGCTGGGCTTCCCG
                      ____________________________________________________________
consensus             TTGGGTGTCGACGACGAGACTTGGAGTCGCGGCCGGGGTCTCGACTGGCTGGGCTTCCCG
 
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JMFS065F05+           GAGAACAAACGCTTCTTCAGTTCGTCGCCGAGTGGAGAGCTTGCTG              
JMFF026A12+           GAGAACAAACGCTTCTTCAGTTCGTCGCCGAGTGGAGAGCTTGCTGCTTCTTCCCTTTTC
                      ____________________________________________________________
consensus             GAGAACAAACGCTTCTTCAGTTCGTCGCCGAGTGGAGAGCTTGCTGCTTCTTCCCTTTTC