Contig 012889:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025K13Sequence500012889 (2)ref|XP_009783706.1|147PREDICTED: uncharacterized protein LOC104232253 [Nicotiana sylvestris]617012889 (2)ref|XP_009783706.1|147PREDICTED: uncharacterized protein LOC104232253 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF025K13- CATATACGATGAGGATCGAAGGGAATG
                      ____________________________________________________________
consensus CATATACGATGAGGATCGAAGGGAATG
 
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rJMFF025K13- AAACCTTAGCTTAATTAGGAAAAAAAAGAAGAAGATCGAGAAGAAAAACATTACATTTAT
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consensus AAACCTTAGCTTAATTAGGAAAAAAAAGAAGAAGATCGAGAAGAAAAACATTACATTTAT
 
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rJMFF025K13- ATATATAGAGAGAGAGAGAGAGATTAAGGGTGACTAGCTAGAGGCCATAACGAATATCGT
                      ____________________________________________________________
consensus ATATATAGAGAGAGAGAGAGAGATTAAGGGTGACTAGCTAGAGGCCATAACGAATATCGT
 
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rJMFF025K13- TGAGTTTGGTCTTGATCCACTTGAAGCTTTCTCTAACAGTGGACTTAACTTTACCTTCAG
JMFF025K13+ GGACTTAACTTTACCTTCAG
                      ____________________________________________________________
consensus TGAGTTTGGTCTTGATCCACTTGAAGCTTTCTCTAACAGTGGACTTAACTTTACCTTCAG
 
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rJMFF025K13- TAGTGAAGGTGTTATAAGACGCAATTCTCTTCTTCCTCTTCATCTCGGGATGGTTGGAGG
JMFF025K13+ TAGTGAAGGTGTTATAAGACGCAATTCTCTTCTTCCTCTTCATCTCGGGATGGTTGGAGG
                      ____________________________________________________________
consensus TAGTGAAGGTGTTATAAGACGCAATTCTCTTCTTCCTCTTCATCTCGGGATGGTTGGAGG
 
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rJMFF025K13- GGGCGAAGCCGTCTCCTTTGGTGCTGGGGCCGTTGAAATTGTAGGTGCCAAATGCTGCCC
JMFF025K13+ GGGCGAAGCCGTCTCCTTTGGTGCTGGGGCCGTTGAAATTGTAGGTGCCAAATGCTGCCC
                      ____________________________________________________________
consensus GGGCGAAGCCGTCTCCTTTGGTGCTGGGGCCGTTGAAATTGTAGGTGCCAAATGCTGCCC
 
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rJMFF025K13- CCAAGAATCCAATTATGCTGCCGAGAACAATTTTCCAATCAAATTTCATTTCCGGCCAAA
JMFF025K13+ CCAAGAATCCAATTATGCTGCCGAGAACAATTTTCCAATCAAATTTCATTTCCGGCCAAA
                      ____________________________________________________________
consensus CCAAGAATCCAATTATGCTGCCGAGAACAATTTTCCAATCAAATTTCATTTCCGGCCAAA
 
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rJMFF025K13- CGTGCTCGTAACCGGATTCACTAGGCTGCCACAAGAAGTTGGTAAACGCTGAGAGGTAAT
JMFF025K13+ CGTGCTCGTAACCGGATTCACTAGGCTGCCACAAGAAGTTGGTAAACGCTGAGAGGTAAT
                      ____________________________________________________________
consensus CGTGCTCGTAACCGGATTCACTAGGCTGCCACAAGAAGTTGGTAAACGCTGAGAGGTAAT
 
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rJMFF025K13- CCACATCTGAGTAGTCGGTGACGTTGCTTCCTCCTATAGCTTCCTTCTTCAAACTCCTCT
JMFF025K13+ CCACATCTGAGTAGTCGGTGACGTTGCTTCCTCCTATAGCTTCCTTCTTCAAACTCCTCT
                      ____________________________________________________________
consensus CCACATCTGAGTAGTCGGTGACGTTGCTTCCTCCTATAGCTTCCTTCTTCAAACTCCTCT
 
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rJMFF025K13- CAGCTGAAACGAACACCGCAGCTAGGAGAAAACTCCAGGATATCGACATCAGTGGCCTCA
JMFF025K13+ CAGCTGAAACGAACACCGCAGCTAGGAGAAAACTCCAGGATATCGACATCAGTGGCCTCA
                      ____________________________________________________________
consensus CAGCTGAAACGAACACCGCAGCTAGGAGAAAACTCCAGGATATCGACATCAGTGGCCTCA
 
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rJMFF025K13- GAAGCCTCCATTTCCCTCTCACTCCCGCCATTCAACCAGATATTTCCTCA
JMFF025K13+ GAAGCCTCCATTTCCCTCTCACTCCCGCCATTCAACCAGATATTTCCTCAGAAAACACAA
                      ____________________________________________________________
consensus GAAGCCTCCATTTCCCTCTCACTCCCGCCATTCAACCAGATATTTCCTCAGAAAACACAA
 
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JMFF025K13+ AATTCAACAAGAATAGAAAAACAGCAACTGCAAACTCCTCTCTCTCTCTCTCTCTCCTCT
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consensus AATTCAACAAGAATAGAAAAACAGCAACTGCAAACTCCTCTCTCTCTCTCTCTCTCCTCT