| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025J05 | Sequence | 570 | 012888 (9) | ref|XP_002523376.1| | 3e-85 | 14-3-3 protein, putative [Ricinus communis] gb|EEF38955.1| 14-3-3 protein, putat | 729 | 021270 | ref|XP_009613251.1| | 2e-83 | PREDICTED: 14-3-3 protein 9 [Nicotiana tomentosiformis] dbj|BAB68527.1| 14-3-3 p |
| JMFF033K21 | Sequence | 609 | 012888 (9) | ref|XP_009613251.1| | 2e-100 | PREDICTED: 14-3-3 protein 9 [Nicotiana tomentosiformis] dbj|BAB68527.1| 14-3-3 p | |||||
| JMFF043N04 | Sequence | 598 | 012888 (9) | emb|CDP15929.1| | 3e-108 | unnamed protein product [Coffea canephora] | 533 | 012888 (9) | ref|XP_009613251.1| | 4e-51 | PREDICTED: 14-3-3 protein 9 [Nicotiana tomentosiformis] dbj|BAB68527.1| 14-3-3 p |
| JMFF044D13 | Sequence | 595 | 012888 (9) | emb|CDP15929.1| | 3e-90 | unnamed protein product [Coffea canephora] | 644 | 012888 (9) | ref|XP_009613251.1| | 2e-64 | PREDICTED: 14-3-3 protein 9 [Nicotiana tomentosiformis] dbj|BAB68527.1| 14-3-3 p |
| JMFN007K05 | Sequence | 527 | 012888 (9) | ref|XP_002523376.1| | 9e-66 | 14-3-3 protein, putative [Ricinus communis] gb|EEF38955.1| 14-3-3 protein, putat | |||||
| JMSF032F20 | Sequence | 729 | 012888 (9) | emb|CDP15929.1| | 1e-120 | unnamed protein product [Coffea canephora] | 691 | 012888 (9) | ref|XP_009613251.1| | 8e-56 | PREDICTED: 14-3-3 protein 9 [Nicotiana tomentosiformis] dbj|BAB68527.1| 14-3-3 p |
This contig is upended
. : . : . : . : . : . :
rJMSF032F20- GGAACTGGTTTTAGCTTAAATCACAAAGG
____________________________________________________________
consensus GGAACTGGTTTTAGCTTAAATCACAAAGG
. : . : . : . : . : . :
rJMSF032F20- ACTAGACAACAGGAGAACAACTGAAAATCTCATTTTGGGCTATGCATCAGTCATCTGGAA
____________________________________________________________
consensus ACTAGACAACAGGAGAACAACTGAAAATCTCATTTTGGGCTATGCATCAGTCATCTGGAA
. : . : . : . : . : . :
rJMSF032F20- TGTAAAACACAACCCATATGCCAAATCAATCATCTATATAGACTAAAGTATACACTAAAA
rJMFF043N04- CAAATCAATCATCTATATAGACTAAAGTATACACTAAAA
rJMFF044D13- TGCCAAATCAATCATCTATATAGACTAAAGTATACACTAAAA
____________________________________________________________
consensus TGTAAAACACAACCCATATGCCAAATCAATCATCTATATAGACTAAAGTATACACTAAAA
. : . : . : . : . : . :
rJMSF032F20- TGATGAAGGGAAATATCGCGGGGGATGCAAAATAAATAACGTGATACACGACATCCAATT
rJMFF043N04- TGATGAAGGGAAATATCGCGGGGGATGCAAATTAAATAACGTGATACACGACATCCAATT
rJMFF044D13- TGATGAAGGGAAATATCGCGGGGGATGCAAATTAAATAACGTGATACACGACATCCAATT
____________________________________________________________
consensus TGATGAAGGGAAATATCGCGGGGGATGCAAATTAAATAACGTGATACACGACATCCAATT
. : . : . : . : . : . :
rJMSF032F20- TTGATACATTTAACACGCTGTAACAGAAGAATTCATGGAACTGTATCTATACGATGAATT
rJMFF043N04- TTGATACATTTAACACGCTGTAACAGAAGAATTCATGGAACTGTATCTATACGATGAATT
rJMFF044D13- TTGATACATTTAACACGCTGTAACAGAAGAATTCATGGAACTGTATCTATACGATGAATT
____________________________________________________________
consensus TTGATACATTTAACACGCTGTAACAGAAGAATTCATGGAACTGTATCTATACGATGAATT
. : . : . : . : . : . :
rJMSF032F20- ATAAGACAAACATGCATCCCCCATGGCTTTATCCCCGTCTCCTCTCTATTCCAAATACAC
rJMFF043N04- ATAAGACAAACATGCATCCCCCATGGCTTTATCCCCGTCTCCTCTCTATTCCAAATACAC
rJMFF044D13- ATAAGACAAACATGCATCCCCCATGGCTTTATCCCCGTCTCCTCTCTATTCCAAATACAC
rJMFF033K21- TCCCCCATGGCTTTATCCCCGTCTCCTCTCTATTCCAAATACAC
____________________________________________________________
consensus ATAAGACAAACATGCATCCCCCATGGCTTTATCCCCGTCTCCTCTCTATTCCAAATACAC
. : . : . : . : . : . :
rJMSF032F20- GTACACGAGTTTGTAATCATCAGCTCGCTCCTTCAATCACTCGGCATCATCAGGTCCTCC
rJMFF043N04- GTACGCGAGTTTGTAATCATCAGCTCGCTCCTTCAATCACTCGGCATCATCAGGTCCTCC
rJMFF044D13- GTACACGAGTTTGTAATCATCAGCTCGCTCCTTCAATCACTCGGCATCATCAGGTCCTCC
rJMFF033K21- GTACACGAGTTTGTAATCATCATNTCGCTCCTTCAATCACTCGGCATCATCAGGTCCTCC
____________________________________________________________
consensus GTACACGAGTTTGTAATCATCAGCTCGCTCCTTCAATCACTCGGCATCATCAGGTCCTCC
. : . : . : . : . : . :
rJMSF032F20- GGGTTTGTTCGTGGCATCCCCCTTCTGGCCATCTTCTGCATCTTCGGGGATATCAGCAGT
rJMFF043N04- GGGTTTGTTCGTGGCATCCCCCTTCTGGCCATCTTCTGCATCTTCGGGGATATCAGCAGT
rJMFF044D13- GGGTTTGTTCGTGGCATCCCCCTTCTGGCCATCTTCTGCATCTTCGGGGATATCAGCAGT
rJMFF033K21- GGGTTTGTTCGTGGCATCCCCCTTCTGGCCATCTTCTGCATCTTCGGGGATATCAGCAGT
____________________________________________________________
consensus GGGTTTGTTCGTGGCATCCCCCTTCTGGCCATCTTCTGCATCTTCGGGGATATCAGCAGT
. : . : . : . : . : . :
rJMSF032F20- CCATAACGTAAGATTGTCCCTCAGGAGCTGCATAATCAAGGTGCTATCCTTGTAGGAGTC
rJMFF043N04- CCATAACGTAAGATTGTCACTCAGGAGCTGCATAATCAAGGTGCTATCCTTGTAGGAGTC
rJMFF044D13- CCATAACGTAAGATTGTCCCTCAGGAGCTGCATAATCAAGGTGCTATCCTTGTAGGAGTC
rJMFF033K21- CCATAACGTAAGATTGTCCCTCAGGAGCTGCATAATCAAGGTGCTATCCTTGTAGGAGTC
____________________________________________________________
consensus CCATAACGTAAGATTGTCCCTCAGGAGCTGCATAATCAAGGTGCTATCCTTGTAGGAGTC
. : . : . : . : . : . :
rJMSF032F20- CTCATTCAGGGAATCCAGTTCTGCAATTGCTTCATCGAAAACCTGCTTTGCAAGGTGGCA
rJMFF043N04- CTCATTCAGGGAATCCAGTTCTGCAATTGCTTCATCGAAAGCCTGCTTTGCAAGGTGGCA
rJMFF044D13- CTCATTCAGGGAATCCAGTTCTGCAATTGCTTCATCGAAAGCCTGCTTTGCAAGGTGGCA
rJMFF033K21- CTCATTCAGGGAATCCAGTTCTGCAATTGCTTCATCGAAAGCCTGCTTTGCAAGGTGGCA
JMSF032F20+ CCTGCTTTGCAAGGTGGCA
____________________________________________________________
consensus CTCATTCAGGGAATCCAGTTCTGCAATTGCTTCATCGAAAGCCTGCTTTGCAAGGTGGCA
. : . : . : . : . : . :
rJMSF032F20- TGCCCTTTCGGGAGAATTAATGATCTCGTAGTAGAAAACCGAGAAGTTCAAAGCCAAACC
rJMFF043N04- TGCCCTTTCGGGAGAATTAATGATCTCGTAGTAGAAAACCGAGAAGTTCAAAGCCAAACC
rJMFF044D13- TGCCCTTTCGGGAGAATTAATGATCTCGTAGTAGAAAACCGAGAAGTTCAAAGCCAAACC
rJMFF033K21- TGCCCTTTCGGGAGAATTAATGATCTCGTAGTAGAAAACCGAGAAGTTCAAAGCCAAACC
JMFF043N04+ TAGTAGAAAACCGAGAAGTTCAAAGCCAAACC
JMSF032F20+ TGCCCTTTCGGGAGAATTAATGATCTCGTAGTAGAAAACCGAGAAGTTCAAAGCCAAACC
____________________________________________________________
consensus TGCCCTTTCGGGAGAATTAATGATCTCGTAGTAGAAAACCGAGAAGTTCAAAGCCAAACC
. : . : . : . : . : . :
rJMSF032F20- CAATCGAATGGGGTGTGTAGGTGGTAACTCAGCCTCTGCTGTAGTGGTAGCCGTCTCGTA
rJMFF043N04- CAATCGAATGGG
rJMFF044D13- CAATCGAATGGGGTGTGTAGGTGGTAACTCAGCCTCTGCTGTAGTGGTAGCCGTCTCGTA
rJMFF033K21- CAATCGAATGGGGTGTGTAGGTGGTAACTCAGCCTCTGCTGTAGTGGTAGCCGTCTCGTA
JMFF044D13+ CAGCCTCTGCTGTAGTGGTAGCCGTCTCGTA
JMFF043N04+ CAATCGAATGGGGTGTGTAGGTGGTAACTCAGCCTCTGCTGTAGTGGTAGCCGTCTCGTA
JMSF032F20+ CAATCGAATGGGGTGTGTAGGTGGTAACTCAGCCTCTGCTGTAGTGGTAGCCGTCTCGTA
____________________________________________________________
consensus CAATCGAATGGGGTGTGTAGGTGGTAACTCAGCCTCTGCTGTAGTGGTAGCCGTCTCGTA
. : . : . : . : . : . :
rJMSF032F20- CG
rJMFF044D13- CGCTTTCAATGAAAGATCAGCAACCTCTTTCTTGTCA
rJMFF033K21- CGCTTTCAATGAAAGATCAGCAACCTCTTTCTTGTCATTCCCATCCTTGAACTCCGCAAG
JMFF044D13+ CGCTTTCAATGAAAGATCAGCAACCTCTTTCTTGTCATTCCCATCCTTGAACTCCGCAAG
JMFF043N04+ CGCTTTCAATGAAAGATCAGCAACCTCTTTCTTGTCATTCCCATCCTTGAACTCCGCAAG
JMFN007K05+ TCTTTCGTGTCATTCCCATCCTTGAACTCCGCAAT
JMSF032F20+ CGCTTTCAATGAAAGATCAGCAACCTCTTTCTTGTCATTCCCATCCTTGAACTCCGCAAG
JMFF025J05+ CTTGTCATTCCCATCCTTGAACTCCGCAAG
____________________________________________________________
consensus CGCTTTCAATGAAAGATCAGCAACCTCTTTCTTGTCATTCCCATCCTTGAACTCCGCAAG
. : . : . : . : . : . :
rJMFF033K21- ATAGCGATAATAGTCCCCCTTCATCTTGTAGTAAAACACAGTTGACTCTCCAGGATTGGA
JMFF044D13+ ATAGCGATAATAGTCCCCCTTCATCTTGTAGTAAAACACAGTTGACTCTCCAGGATTGGA
JMFF043N04+ ATAGCGATAATAGTCCCCCTTCATCTTGTAGTAAAACACAGTTGACTCTCCAGGATTGGA
JMFN007K05+ ATACCGATAATAGTACCCATTCATGTTGTAGTACAACACAGTTGACTCTCCAGGATTGTA
JMSF032F20+ ATAGCGATAATAGTCCCCCTTCATCTTGTAGTAAAACACAGTTGACTCTCCAGGATTGGA
JMFF025J05+ ATAGCGATAATAGTCCCCCTTCATCTTGTAGTAAAACACAGTTGACTCTCCAGGATTGGA
____________________________________________________________
consensus ATAGCGATAATAGTCCCCCTTCATCTTGTAGTAAAACACAGTTGACTCTCCAGGATTGGA
. : . : . : . : . : . :
rJMFF033K21- TGANGGGATGAGATGCTCATCAATCACAGTCATGATATCACTGCATATATNGGTGAGCTC
JMFF044D13+ TGAGGGGATGAGATGCTCATCAATCACAGTCATGATATCACTGCATATATTGGTGAGCTC
JMFF043N04+ TGAGGGGATGAGATGCTCATCAATCACAGTCATGATATCACTGCATATATTGGTGAGCTC
JMFN007K05+ TGAGGGGATGAAATGCTCATCAATCACAGTCATGATATCACTGCATATATTGGTGAGCTC
JMSF032F20+ TGAGGGGATGAGATGCTCATCAATCACAGTCATGATATCACTGCATATATTGGTGAGCTC
JMFF025J05+ TGAGGGGATGAGATGCTCATCAATCACAGTCATGATATCACTGCATATATTGGTGAGCTC
____________________________________________________________
consensus TGAGGGGATGAGATGCTCATCAATCACAGTCATGATATCACTGCATATATTGGTGAGCTC
. : . : . : . : . : . :
rJMFF033K21- CATCTNCACCTTTTG
JMFF044D13+ CATCTCCACCTTTTGCCTGTACTCCTTGATCCTCTTCACATTCAGATCATTCCCCCTTGA
JMFF043N04+ CATCTCCACCTTTTGCCTGTACTCCTTGATCCTCTTCACATTCAGATCATTCCCCCTTGA
JMFN007K05+ CATCTCCACCTTTTGCCTGTACTCCTTGATCCTCTTCACATTCAGATCATTCCCCCTTGA
JMSF032F20+ CATCTCCACCTTTTGCCTGTACTCCTTGATCCTCTTCACATTCAGATCATTCCCCCTTGA
JMFF025J05+ CATCTCCACCTTTTGCCTGTACTCCTTGATCCTCTTCACATTCAGATCATTCCCCCTTGA
____________________________________________________________
consensus CATCTCCACCTTTTGCCTGTACTCCTTGATCCTCTTCACATTCAGATCATTCCCCCTTGA
. : . : . : . : . : . :
JMFF044D13+ CTCTTCCTTCTGCTCAATGGATGACAAGATCCTCCATGATGCTCTCCTAGATCCCACCAC
JMFF043N04+ CTCTTCCTTCTGCTCAATGGATGACAAGATCCTCCATGATGCTCTCCTAGATCCCACCAC
JMFN007K05+ CTCTTCCCTTTGCTCAATGGATGGCAAGATCCTCCATAATGCTCTCCTAGATCCCACCAC
JMSF032F20+ CTCTTCCTTCTGCTCAATGGATGACAAGATCCTCCATGATGCTCTCCTAGATCCCACCAC
JMFF025J05+ CTCTTCCTTCTGCTCAATGGATGACAAGATCCTCCATGATGCTCTCCTAGATCCCACCAC
____________________________________________________________
consensus CTCTTCCTTCTGCTCAATGGATGACAAGATCCTCCATGATGCTCTCCTAGATCCCACCAC
. : . : . : . : . : . :
JMFF044D13+ ATTCTTGTACCCTACAGATAGCAAATTCCTCTCTTCCACAGTCAATTCCACATCCATTTT
JMFF043N04+ ATTCTTGTACCCTACAGATAGCAAATTCCTCTCTTCCACAGTCAATTCCACATCCATTTT
JMFN007K05+ ATTCTTGTACCCTACAGATAGCCAATTCCTCTCTTCCTCAGTCAATTCCACATCCATTTT
JMSF032F20+ ATTCTTGTACCCTACAGATAGCAAATTCCTCTCTTCCACAGTCAATTCCACATCCATTTT
JMFF025J05+ ATTCTTGTACCCTACAGATAGCAAATTCCTCTCTTCCACAGTCAATTCCACATCCATTTT
____________________________________________________________
consensus ATTCTTGTACCCTACAGATAGCAAATTCCTCTCTTCCACAGTCAATTCCACATCCATTTT
. : . : . : . : . : . :
JMFF044D13+ TGCCACTTGCTTCATAGCATCCACCATCTCGTCGTAGCGTTCAGCTTGCTCGGCAATCTT
JMFF043N04+ TGCCACTTGCTTCATAGCATCCACCATCTCGTCGTAGCGTTCAGCTTGCTCGGCAATCTT
JMFN007K05+ TGCCACCTGCTTCATAGCATCCACCATCTCGTCGTAGCGTTCAGCTTGCTCGGCAATCTT
JMSF032F20+ TGCCACTTGCTTCATAGCATCCACCATCTCGTCGTAGCGTTCAGCTTGCTCGGCAATCTT
JMFF025J05+ TGCCACTTGCTTCATAGCATCCACCATCTCGTCGTAGCGTTCAGCTTGCTCGGCAATCTT
____________________________________________________________
consensus TGCCACTTGCTTCATAGCATCCACCATCTCGTCGTAGCGTTCAGCTTGCTCGGCAATCTT
. : . : . : . : . : . :
JMFF044D13+ GGCGACATAGACGAAGTGCTCGCG
JMFF043N04+ GGCGACATAGACGAAGTGCTCGCGTTGTTTAGAGGAATCCATGGCAGATCAGTGTCTCTC
JMFN007K05+ GGCGACATAGACGAAGTGCTCGCGTTGTTTATAGGAATCCATGGCAGATCAGTGTCTCTC
JMSF032F20+ GGCGACATAGACGAAGTGCTCGCGTTGTTTAGAGGAATCCATGGCAGATCAGTGTCTCTC
JMFF025J05+ GGCGACATAGACGAAGTGCTCGCGTTGTTTAGAGGAATCCATGGCAGATCAGTGTCTCTC
____________________________________________________________
consensus GGCGACATAGACGAAGTGCTCGCGTTGTTTAGAGGAATCCATGGCAGATCAGTGTCTCTC
. : . : . : . : . : . :
JMFF043N04+ TCAGAGGTTTTTTGCTCTGCTTAGTT
JMFN007K05+ TCAGAGGTTTTTTGCTATGCTTAGTTGTTGAGACTTGAGAAAGACTAAACTCCAAAGCTC
JMSF032F20+ TCAGAGGTTTTTTGCTCTGCTTAGTTGTTGAGACTTGAGAAAGACTAAACTCCAAAGCTC
JMFF025J05+ TCAGAGGTTTTTTGCTCTGCTTAGTTGTTGAGACTTGAGAAAGACTAAACTCCAAAGCTC
____________________________________________________________
consensus TCAGAGGTTTTTTGCTCTGCTTAGTTGTTGAGACTTGAGAAAGACTAAACTCCAAAGCTC
. : . : . : . : . : . :
JMFN007K05+ TTTCTAGCTTTT
JMSF032F20+ TTTCTAGCTTTTCCTCTGCCTAGCACAGCTGTTACGTTGCAATGTCGC
JMFF025J05+ TTTCTAGCTTTTCCTCTGCCTAGCACAGCTGTTACGTTGCAATGTCGCATTTTCTACGAC
____________________________________________________________
consensus TTTCTAGCTTTTCCTCTGCCTAGCACAGCTGTTACGTTGCAATGTCGCATTTTCTACGAC