Contig 012884:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024N19Sequence429012884 (2)ref|XP_009780449.1|2e-29PREDICTED: mitochondrial inner membrane protein OXA1-like [Nicotiana sylvestris615011330 (2)ref|XP_011101043.1|1e-23PREDICTED: mitochondrial inner membrane protein OXA1-like [Sesamum indicum]
JMSF024P09Sequence697012884 (2)ref|XP_009621900.1|9e-53PREDICTED: mitochondrial inner membrane protein OXA1-like [Nicotiana tomentosif787011330 (2)ref|XP_011101043.1|2e-49PREDICTED: mitochondrial inner membrane protein OXA1-like [Sesamum indicum]

Alignment

This contig is upended


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JMSF024P09+                                                  TGTATGCTAAGAATGTTTGAA
                      ____________________________________________________________
consensus                                                    TGTATGCTAAGAATGTTTGAA
 
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JMSF024P09+           GTGTAAAATTTCAGGAGTTACTGAAAGTCACAAACTTTAAACTCGTGCAGTTGATTATAT
                      ____________________________________________________________
consensus             GTGTAAAATTTCAGGAGTTACTGAAAGTCACAAACTTTAAACTCGTGCAGTTGATTATAT
 
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JMSF024P09+           CAAAAGCTAGGTTCCACAAACCATTCAAGCAAATCGCACAAGGCACATATGTAATCATGA
                      ____________________________________________________________
consensus             CAAAAGCTAGGTTCCACAAACCATTCAAGCAAATCGCACAAGGCACATATGTAATCATGA
 
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JMSF024P09+           GGTTTGAGATTTATACTAAGAGATGAAGAAATGTATTACCAATTAAGTCCGGTATAGCAA
                      ____________________________________________________________
consensus             GGTTTGAGATTTATACTAAGAGATGAAGAAATGTATTACCAATTAAGTCCGGTATAGCAA
 
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JMSF024P09+           TGGACATAATCAATCAAGTGTTGCAATACAGCCACAGGCAAAAACGAGTCTGCAGCCGCG
                      ____________________________________________________________
consensus             TGGACATAATCAATCAAGTGTTGCAATACAGCCACAGGCAAAAACGAGTCTGCAGCCGCG
 
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JMSF024P09+           ATTGCCACTTCATTCACCACCGGGGCTTGCGAAGCCACTACCTCAACAGCCTTATCACTC
JMFF024N19+                                                              TTATCACTC
                      ____________________________________________________________
consensus             ATTGCCACTTCATTCACCACCGGGGCTTGCGAAGCCACTACCTCAACAGCCTTATCACTC
 
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JMSF024P09+           AGCACATCCGCAATGTCCGACATATACTCTATCTTGTCCACTCCCTCTCCAACCCCAGTA
JMFF024N19+           AGCACATCCGCAATGTCCGACATATACTCTATCTTGTCCACTCCCTCTCCAACCCCAGTA
                      ____________________________________________________________
consensus             AGCACATCCGCAATGTCCGACATATACTCTATCTTGTCCACTCCCTCTCCAACCCCAGTA
 
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JMSF024P09+           GACATATTCCTAACCAGACAACCCCCCAAACTCATGGGAGCACAAAATCTCCTGTCCACA
JMFF024N19+           GACATATTCCTAACCAGACAACCCCCCAAACTCATGGGAGCACAAAATCTCCTGTCCACA
                      ____________________________________________________________
consensus             GACATATTCCTAACCAGACAACCCCCCAAACTCATGGGAGCACAAAATCTCCTGTCCACA
 
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JMSF024P09+           AATGAGTTTCTGGTGCCGCTAACGCCGTTGCCAGAGCAACTGTGCTGAAGATAACGAAAT
JMFF024N19+           AATGAGTTTCTGGTGCCGCTAACGCCGTTGCCAGAGCAACTGTGCTGAAGATAACGAAAT
                      ____________________________________________________________
consensus             AATGAGTTTCTGGTGCCGCTAACGCCGTTGCCAGAGCAACTGTGCTGAAGATAACGAAAT
 
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JMSF024P09+           ATTTTAGGGTTTTCCGAGCAGGATTCAGGGTGGTTTTTCCGATCATCATCGCGCTGTAAG
JMFF024N19+           ATTTTAGGGTTTTCCGAGCAGGATTCAGGGTGGTTTTTCCGATCATCATCGCGCTGTAAG
                      ____________________________________________________________
consensus             ATTTTAGGGTTTTCCGAGCAGGATTCAGGGTGGTTTTTCCGATCATCATCGCGCTGTAAG
 
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JMSF024P09+           TGGGAAAAGGATGGTGCAAACCGTTGCTGCTGGTAAAACAGCTCCGCTCTTGTAGATATA
JMFF024N19+           TGGGAAAAGGATGGTGCAAACCGTTGCTGCTGGTAAAACAGCTCCGCTCTTGTAGATATA
                      ____________________________________________________________
consensus             TGGGAAAAGGATGGTGCAAACCGTTGCTGCTGGTAAAACAGCTCCGCTCTTGTAGATATA
 
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JMSF024P09+           CTCCGTCTGTAAGCCATTATTGACACTTGGTTTC                          
JMFF024N19+           CTCCGTCTGTAAGCCATTATTGACACTTGGTTTCTACACATACACAATCCATATCTTCCA
                      ____________________________________________________________
consensus             CTCCGTCTGTAAGCCATTATTGACACTTGGTTTCTACACATACACAATCCATATCTTCCA
 
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JMFF024N19+           GATCAAAAATACGACTAAAATGTCTTTAACAGTGACCTTCAGCTTCAGCCTTAAGGGCAT
                      ____________________________________________________________
consensus             GATCAAAAATACGACTAAAATGTCTTTAACAGTGACCTTCAGCTTCAGCCTTAAGGGCAT