Contig 012883:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023D01Sequence380012883 (2)ref|XP_006444399.1|9e-23hypothetical protein CICLE_v100237231mg, partial [Citrus clementina] gb|ESR57639
JMFF024J22Sequence512012883 (2)gb|AHB84678.1|9e-37pectin methylesterase [Citrus reticulata]754013146 (2)dbj|BAF95866.1|2e-56pectin methylesterase isoform alpha [Vitis hybrid cultivar]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF024J22+ GCNTTCGAGACAGGTGTACTGGTTGGTCATGG
                      ____________________________________________________________
consensus GCNTTCGAGACAGGTGTACTGGTTGGTCATGG
 
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JMFF024J22+ CGGTGCTGAGGAGTGTCTGCAAGTCGGCGTAGCGCTTTGCCGGAGAATTCTCGAGACCGT
                      ____________________________________________________________
consensus CGGTGCTGAGGAGTGTCTGCAAGTCGGCGTAGCGCTTTGCCGGAGAATTCTCGAGACCGT
 
. : . : . : . : . : . :
JMFF023D01+ AACGCGTCGGAGAACAGTTCCAGGCAGACGTGGAGAG
JMFF024J22+ CGAGGACTGTCCGGAGATCCGCCAACGTGTCGGAGAAAAGTTCCAGGCAGACGTAGAGAG
                      ____________________________________________________________
consensus CGAGGACTGTCCGGAGATCCGCCAACGTGTCGGAGAACAGTTCCAGGCAGACGTGGAGAG
 
. : . : . : . : . : . :
JMFF023D01+ CGCGCCTCTCCATCGTTCCCAGGTCGGGAACCACCCTCCGGATGCGGCTGCAGTTAGCGG
JMFF024J22+ CGCGGCTCTCCATCGTTCCCAGGTCGGGAACCACCCTCCGGATGCGGCTGCAGTTAGCGG
                      ____________________________________________________________
consensus CGCGGCTCTCCATCGTTCCCAGGTCGGGAACCACCCTCCGGATGCGGCTGCAGTTAGCGG
 
. : . : . : . : . : . :
JMFF023D01+ CGGCTGTTTTAATCTCCGACACGGTGACATTCACGGTGGCGGAGATTATTTCGGGGATAG
JMFF024J22+ CGGCTGTTGTAATCTCCGACACGGTGACATTCACGGTGGCGGAGATTATTTCGGGGATAG
                      ____________________________________________________________
consensus CGGCTGTTTTAATCTCCGACACGGTGACATTCACGGTGGCGGAGATTATTTCGGGGATAG
 
. : . : . : . : . : . :
JMFF023D01+ ATTTGGCGCGAAGATCGGGGGTTTTCACTAAGGTTGACACGCAGAGATCTCGGTAGAGGC
JMFF024J22+ ATTTGGCGCGAAGATCGGGGGTTTTCACTAAGGTTGACACGCAGAGATCACGGTAGAGGC
                      ____________________________________________________________
consensus ATTTGGCGCGAAGATCGGGGGTTTTCACTAAGGTTGACACGCAGAGATCTCGGTAGAGGC
 
. : . : . : . : . : . :
JMFF023D01+ TGTGATCACAAGCTGAATGGGCAACCTGATGAATGTCGTGTGAGGTTGTCGCGTTCATGG
JMFF024J22+ TGCGATCACAAGCTGAATGGGCAACCTGATGAATGTCGTCCGAGGTTGTCGCGTTCATGG
                      ____________________________________________________________
consensus TGTGATCACAAGCTGAATGGGCAACCTGATGAATGTCGTGTGAGGTTGTCGCGTTCATGG
 
. : . : . : . : . : . :
JMFF023D01+ CGGAGGATTGGAAGACTGTTAAAGACAAGAACGGCGCTAGTAGCACGACAGGAACCAACA
JMFF024J22+ CGTAGGATTGGAAGACTGTTAGAGACAAGAACGCCGCTAGTAGCACGACAGGAACCAACA
                      ____________________________________________________________
consensus CGTAGGATTGGAAGACTGTTAGAGACAAGAACGGCGCTAGTAGCACGACAGGAACCAACA
 
. : . : . : . : . : . :
JMFF023D01+ TTATGGGATTCCGTCCGAGGTTATCCATTTCG
JMFF024J22+ TTATCGGATTCCGTCCGAGGTTCTGCATTTCGGAATCTATAGTACTGTGATATGATCGCC
                      ____________________________________________________________
consensus TTATGGGATTCCGTCCGAGGTTCTGCATTTCGGAATCTATAGTACTGTGATATGATCGCC