Contig 012881:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023I01Sequence373012881 (3)ref|XP_009773949.1|8e-56PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Nicotiana sylvestris]701012881 (3)ref|XP_006298155.1|9e-36hypothetical protein CARUB_v10014204mg [Capsella rubella] gb|EOA31053.1| hypothe
JMFS052A10Sequence613012881 (3)gb|KJB82613.1|1e-98hypothetical protein B456_013G204900 [Gossypium raimondii]

Alignment

This contig is upended


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rJMFF023I01-                                                         ACTTTTTTTGGCT
                      ____________________________________________________________
consensus                                                            ACTTTTTTTGGCT
 
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rJMFF023I01-          GCATATCAATATCTCACTACATCTTATTCAATAAACAAATAATGAATATCCTTTGCTTAT
                      ____________________________________________________________
consensus             GCATATCAATATCTCACTACATCTTATTCAATAAACAAATAATGAATATCCTTTGCTTAT
 
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rJMFF023I01-          TCCATTTACTTCAACTTTCACTTCCTACCTACCTCTTGTGGCTATAATAGATATTATCCA
                      ____________________________________________________________
consensus             TCCATTTACTTCAACTTTCACTTCCTACCTACCTCTTGTGGCTATAATAGATATTATCCA
 
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rJMFF023I01-          ATAAGAGGTGCCTTAGCTTCTGTCACCGGGAACACGAAAAACCCAGAAGCAGCAATGGAA
                      ____________________________________________________________
consensus             ATAAGAGGTGCCTTAGCTTCTGTCACCGGGAACACGAAAAACCCAGAAGCAGCAATGGAA
 
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rJMFF023I01-          CTTGGCTCTCCCAGAACCCGCAGAATCCATTACTTACTGAGTTCTTGCGACATTACAACT
                      ____________________________________________________________
consensus             CTTGGCTCTCCCAGAACCCGCAGAATCCATTACTTACTGAGTTCTTGCGACATTACAACT
 
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rJMFF023I01-          ATGAGCTCTTTAATCTTCTCTGGTTGCCGACGATAAGCCTACTGAGTCCAAGAACGAGGA
                      ____________________________________________________________
consensus             ATGAGCTCTTTAATCTTCTCTGGTTGCCGACGATAAGCCTACTGAGTCCAAGAACGAGGA
 
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rJMFF023I01-          CCCAGGTTGATGCAGAGATCTTTTCCTTTATCATTAAGAGCAGCGCAGAACTTAGCACCG
                      ____________________________________________________________
consensus             CCCAGGTTGATGCAGAGATCTTTTCCTTTATCATTAAGAGCAGCGCAGAACTTAGCACCG
 
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rJMFF023I01-          TCTTCAAGATTTGCGCTTCTATTCCCTTGAAGAAACCGAGAATCCCTTCTTTTCTAAGGA
                      ____________________________________________________________
consensus             TCTTCAAGATTTGCGCTTCTATTCCCTTGAAGAAACCGAGAATCCCTTCTTTTCTAAGGA
 
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rJMFF023I01-          TAGCACAAGCAACACCTAGAAGTGTTTTACGTGGTTTGCGCTTGGGTTTCTTCTCGTCAT
                      ____________________________________________________________
consensus             TAGCACAAGCAACACCTAGAAGTGTTTTACGTGGTTTGCGCTTGGGTTTCTTCTCGTCAT
 
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rJMFF023I01-          CATCACTTGTGTCCGCAACTTGAATCATGACTTTGCACCTGATAGCAGGAAAAGTAAGAA
                      ____________________________________________________________
consensus             CATCACTTGTGTCCGCAACTTGAATCATGACTTTGCACCTGATAGCAGGAAAAGTAAGAA
 
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rJMFF023I01-          TTGTAGCAATGGTCTTTGAGAGTGCGCCTAATAAAAATGCGGAAAATGCAGAAAGGACTA
                      ____________________________________________________________
consensus             TTGTAGCAATGGTCTTTGAGAGTGCGCCTAATAAAAATGCGGAAAATGCAGAAAGGACTA
 
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rJMFF023I01-          CTGGTGATGAATCCTTTCCCTTTGAAGTTTGTTGATCTTTCAGGAGCCGTTGTTTGAGCT
JMFS052A10+                      TCCTTTCCCTTTGAAGTTTGTTGATCTTTCAGANGCCGTTGTTTGAGCT
                      ____________________________________________________________
consensus             CTGGTGATGAATCCTTTCCCTTTGAAGTTTGTTGATCTTTCAGGAGCCGTTGTTTGAGCT
 
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rJMFF023I01-          GATCGAAAACTGTGTACTGAATGGCA                                  
JMFS052A10+           GATCGAAAACTGTGTACTGAATGGCAGGGTTGGATGTCAATAAAAGAGAAATTCCGAGAC
                      ____________________________________________________________
consensus             GATCGAAAACTGTGTACTGAATGGCAGGGTTGGATGTCAATAAAAGAGAAATTCCGAGAC
 
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JMFS052A10+           CATCAAATGCTTCGCTCAAGCTGCCTTCTGTAAGCGTTTTCCAAAGGCTTTTAGATTTTC
                      ____________________________________________________________
consensus             CATCAAATGCTTCGCTCAAGCTGCCTTCTGTAAGCGTTTTCCAAAGGCTTTTAGATTTTC
 
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JMFS052A10+           CAAATGCACTATTCTGCATCCTCAACTAAGCTGTATCCAATGGTTGAGTCTCAATGTCAG
                      ____________________________________________________________
consensus             CAAATGCACTATTCTGCATCCTCAACTAAGCTGTATCCAATGGTTGAGTCTCAATGTCAG
 
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JMFS052A10+           TACTAGCCCCAGCTGCAGCAGCAATTTCCAGGTTGGCTTTTGTTCCAATGGATCTGGCAC
JMFF023I01+                                                          ATGGATCTGGCAC
                      ____________________________________________________________
consensus             TACTAGCCCCAGCTGCAGCAGCAATTTCCAGGTTGGCTTTTGTTCCAATGGATCTGGCAC
 
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JMFS052A10+           CACTTCTATCCAAATATAGTCTCTTAAAGTAACTATACCCATAGAAATTAACAAACTGGG
JMFF023I01+           CACTTCTATCCAAATATAGTCTCTTAAAGTAACTATACCCATAGAAATAAACAAACTGGG
                      ____________________________________________________________
consensus             CACTTCTATCCAAATATAGTCTCTTAAAGTAACTATACCCATAGAAATTAACAAACTGGG
 
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JMFS052A10+           CAATGAAAGAATGCAGATTCTTTGTTCCAAGACCTTGGTACAACGAAAGAACCCGACCAG
JMFF023I01+           CAATGAAAGAATGCAGATTCTTTGTTCCAAGACCTTGGTACAACGAAAGAACCCGACCAG
                      ____________________________________________________________
consensus             CAATGAAAGAATGCAGATTCTTTGTTCCAAGACCTTGGTACAACGAAAGAACCCGACCAG
 
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JMFS052A10+           TTGATAATGCCTCGAAAAGAACATCTGTTAAATTCCTGTATTTGCGGTGACCATGGGCTT
JMFF023I01+           TTGATAATGCCTCGAAAAGAACATCTGTTAAATTCCTGTATTTGCGGTGACCATGGGCTT
                      ____________________________________________________________
consensus             TTGATAATGCCTCGAAAAGAACATCTGTTAAATTCCTGTATTTGCGGTGACCATGGGCTT
 
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JMFS052A10+           GAAGCTCGGCTTGGTACTTGGTTTTACAGGTATCGAGCGGATACAAGATGGTGGTGCTGA
JMFF023I01+           GAAGCTCGGCTTGGTACTTGGTTTTACAGGTATCGAGCGGAAACAAGATGGTGGTGCTGA
                      ____________________________________________________________
consensus             GAAGCTCGGCTTGGTACTTGGTTTTACAGGTATCGAGCGGATACAAGATGGTGGTGCTGA
 
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JMFS052A10+           CTATAGCTCCAATGGCTCCGGATGTCGCCTCCGATATAGATTCCAGATCACCGCCACCCA
JMFF023I01+           CTATAGCTCCAATGGCTCCGGATGTCGCCTCCGATATAGACTCCAGATCACCGCCACCCA
                      ____________________________________________________________
consensus             CTATAGCTCCAATGGCTCCGGATGTCGCCTCCGATATAGATTCCAGATCACCGCCACCCA
 
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JMFS052A10+           TATCTCTCTCTTTCTCTCTCTCT                                     
JMFF023I01+           TATCTCTCTCTTTCTCTCTCTCTCTCTATCTCACTACGGCGCCGGAGATGAAAATATGAT
                      ____________________________________________________________
consensus             TATCTCTCTCTTTCTCTCTCTCTCTCTATCTCACTACGGCGCCGGAGATGAAAATATGAT