Contig 012877:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021G22Sequence497012877 (3)ref|XP_004242591.1|5e-17PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic [Sol668004232 (3)gb|ACN26059.1|8e-79unknown [Zea mays] gb|AFW68477.1| hypothetical protein ZEAMMB73_483363 [Zea mays
JMSF011K23Sequence356012877 (3)ref|XP_004242591.1|8e-08PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic [Sol723004232 (3)emb|CAN75999.1|2e-95hypothetical protein VITISV_019163 [Vitis vinifera]
JMSF016C18Sequence471012877 (3)ref|XP_004242591.1|9e-18PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic [Sol778004232 (3)ref|XP_004982730.1|2e-102PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF016C18+ TTTTTGAGCCAAACTGCAGCT
JMFF021G22+ TGAGCCAAACTGCAGCT
                      ____________________________________________________________
consensus TTTTTGAGCCAAACTGCAGCT
 
. : . : . : . : . : . :
JMSF011K23+ ATCTGACAGCAA
JMSF016C18+ CTGGCAGTGGATAGGCAGCACCTGCAGAGCCAGTACCAACAAGTTCAGATCTGACAGCAA
JMFF021G22+ CTGGCAGTGGATAGGCAGCACCTGCAGAGCCAGTACCAACAAGTTCAGATCTGACAGCAA
                      ____________________________________________________________
consensus CTGGCAGTGGATAGGCAGCACCTGCAGAGCCAGTACCAACAAGTTCAGATCTGACAGCAA
 
. : . : . : . : . : . :
JMSF011K23+ TATACCGTGGCAATCTATTGTGTTTGAACATATTATAATCTCCAGGCATTCGACCAAACT
JMSF016C18+ TATACCGTGGCAATCTATTGTGTTTGAACATATTATAATCTCCAGGCATTCGACCAAACT
JMFF021G22+ TATACCGTGGCAATCTATTGTGTTTGAACATATTATAATCTCCAGGCATTCGACCAAACT
                      ____________________________________________________________
consensus TATACCGTGGCAATCTATTGTGTTTGAACATATTATAATCTCCAGGCATTCGACCAAACT
 
. : . : . : . : . : . :
JMSF011K23+ TCATTTCTGGGTAGGAAGAAGGCCAGGATGCACATGAGTGTATTCTTGTACTCGATGCTA
JMSF016C18+ TCATTTCTGGGTAGGAAGAAGGCCAGGATGCACATGAGTGTATTCTTGTACTCGATGCTA
JMFF021G22+ TCATTTCTGGGTAGGAAGAAGGCCAGGATGCACATGAGTGTATTCTTGTACTCGATGCTA
                      ____________________________________________________________
consensus TCATTTCTGGGTAGGAAGAAGGCCAGGATGCACATGAGTGTATTCTTGTACTCGATGCTA
 
. : . : . : . : . : . :
JMSF011K23+ TATTATTAGTTCTTGAAATTCTCCAGATTGGTTGCTTAAAATAAGAGCAACGACAATAGT
JMSF016C18+ TATTATTAGTTCTTGAAATTCTCCAGATTGGTTGCTTAAAATAAGAGCAACGACAATAGT
JMFF021G22+ TATTATTAGTTCTTGAAATTCTCCAGATTGGCTGCTTAAAATAAGAGCAACGACAATAGT
                      ____________________________________________________________
consensus TATTATTAGTTCTTGAAATTCTCCAGATTGGTTGCTTAAAATAAGAGCAACGACAATAGT
 
. : . : . : . : . : . :
JMSF011K23+ TTGCATAATGCACATTCGATTGCTGAATTAGAAATGGCGAAACGAGAACTTTTGCATCCT
JMSF016C18+ TTGCATAATGCACATTCGATTGCTGAATTAGAAATGGCGAAACGAGAACTTTTGCATCCT
JMFF021G22+ TTGCATAATGCACATTCGATTGCTGAATTAGAAATGGCGAAACGAGAACTTTTGCATCCT
                      ____________________________________________________________
consensus TTGCATAATGCACATTCGATTGCTGAATTAGAAATGGCGAAACGAGAACTTTTGCATCCT
 
. : . : . : . : . : . :
JMSF011K23+ TTTCCCAGTAGTGGTGCGGCGGAAGGGATGGCCGGAAGTGGAAATTGTTGAATTTAGATT
JMSF016C18+ TTTCCCAGTAGTGGTGCGGCGGAAGGGATGGCCGGAAGTGGAAATTGTTGAATTTAGATT
JMFF021G22+ TTTCCCAGTAGTGGTGCGGCGGAAGGGATGGCCGGAAGTGGAAATTGTTGAATTTAGATT
                      ____________________________________________________________
consensus TTTCCCAGTAGTGGTGCGGCGGAAGGGATGGCCGGAAGTGGAAATTGTTGAATTTAGATT
 
. : . : . : . : . : . :
JMSF011K23+ GGAATTTTCCAAATGAGACATCCATTCGTTTTTTCTTCAACTC
JMSF016C18+ GGAATTTTCCAAATGAGACATCCATTCGTTTTTTCTTCAACTCGCAGATTTACTCAGTTG
JMFF021G22+ GGAATTTTCCAAATGAGACATCCATTCGTTTTTTCTTCAACTCGCAGATTTACTCAGTTG
                      ____________________________________________________________
consensus GGAATTTTCCAAATGAGACATCCATTCGTTTTTTCTTCAACTCGCAGATTTACTCAGTTG
 
. : . : . : . : . : . :
JMSF016C18+ ATTGCATTCTTCAATGGCTTTGGAAATCG
JMFF021G22+ ATTGCATTCTTCAATGGCTTTGGAAATCGGAAGCCTCGAAATTAGCGAGCGATTCCAGAT
                      ____________________________________________________________
consensus ATTGCATTCTTCAATGGCTTTGGAAATCGGAAGCCTCGAAATTAGCGAGCGATTCCAGAT