| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007I03 | Sequence | 560 | 012869 (6) | emb|CDP17569.1| | 4e-12 | unnamed protein product [Coffea canephora] | 822 | 002667 (6) | ref|XP_009623333.1| | 308 | PREDICTED: uncharacterized protein LOC104114563 [Nicotiana tomentosiformis] |
| JMFF013H12 | Sequence | 561 | 012869 (6) | emb|CDP17569.1| | 1e-12 | unnamed protein product [Coffea canephora] | 794 | 002667 (6) | ref|XP_009791364.1| | 315 | PREDICTED: uncharacterized protein LOC104238644 [Nicotiana sylvestris] |
| JMFF018G15 | Sequence | 576 | 012869 (6) | 795 | 002667 (6) | ref|XP_009623333.1| | 383 | PREDICTED: uncharacterized protein LOC104114563 [Nicotiana tomentosiformis] | |||
| JMFF024P23 | Sequence | 483 | 012869 (6) | 795 | 002667 (6) | ref|XP_009623333.1| | 382 | PREDICTED: uncharacterized protein LOC104114563 [Nicotiana tomentosiformis] | |||
| JMFF042I08 | Sequence | 652 | 012869 (6) | emb|CDP17569.1| | 5e-25 | unnamed protein product [Coffea canephora] | 600 | 002667 (6) | ref|XP_009791364.1| | 246 | PREDICTED: uncharacterized protein LOC104238644 [Nicotiana sylvestris] |
| JMSF017A10 | Sequence | 248 | 012869 (6) | ||||||||
This contig is upended
. : . : . : . : . : . :
JMFF042I08+ CAGC
____________________________________________________________
consensus CAGC
. : . : . : . : . : . :
JMFF042I08+ AGGGGAACTGGCAATGCCAATGAGATCCTCACCGGTTTTCAGGATAGAACTGTCGGTCTT
____________________________________________________________
consensus AGGGGAACTGGCAATGCCAATGAGATCCTCACCGGTTTTCAGGATAGAACTGTCGGTCTT
. : . : . : . : . : . :
JMFF042I08+ AAACGTGGCATTTCCGACCTCGGTGAAAACCCTAGTTAGGGCTCTAGCAGATTCCCAGGG
JMFF013H12+ ACCCTAGTTAGGGCTCTAGCAGATTCCCAGGG
JMFF007I03+ ACCCTAGTTAGGGCTCTAGCAGATTCCCAGGG
____________________________________________________________
consensus AAACGTGGCATTTCCGACCTCGGTGAAAACCCTAGTTAGGGCTCTAGCAGATTCCCAGGG
. : . : . : . : . : . :
JMFF042I08+ ATCAGGGGGTTGGTATGTAACCGCAATCATAGTTAAGATTAGCACAGAGAACACAAACAC
JMFF013H12+ ATCAGGGGGTTGGTATGTAACCGCAATCATAGTTAAGATTAGCACAGAGAACACAAACAC
JMFF024P23+ CAATCATAGTTAAGATTAGCACAGAGAACACAAACAC
JMFF007I03+ ATCAGGGGGTTGGTATGTAACCGCAATCATAGTTAAGATTAGCACAGAGAACACAAACAC
JMFF018G15+ AATCATAGTTAAGATTAGCACAGAGAACACAAACAC
____________________________________________________________
consensus ATCAGGGGGTTGGTATGTAACCGCAATCATAGTTAAGATTAGCACAGAGAACACAAACAC
. : . : . : . : . : . :
JMFF042I08+ TGAGAAACACACATTGCTTATCTGCTTAATTATGTTTTGCCCAATTGGATCAGTTATTGA
JMFF013H12+ TGAGAAACACACATTGCTTATCTGCTTAATTATGTTTTGCCCAATTGGATCAGTTATTGA
JMFF024P23+ TGAGAAACACACATTGCTTATCTGCTTAATTATGTTTTGCCCAATTGGATCAGTTATTGA
JMFF007I03+ TGAGAAACACACATTGCTTATCTGCTTAATTATGTTTTGCCCAATTGGATCAGTTATTGA
JMFF018G15+ TGAGAAACACACATTGCTTATCTGCTTAATTATGTTTTGCCCAATTGGATCAGTTATTGA
____________________________________________________________
consensus TGAGAAACACACATTGCTTATCTGCTTAATTATGTTTTGCCCAATTGGATCAGTTATTGA
. : . : . : . : . : . :
JMFF042I08+ ATTCTGTTCTCTCATTGCAACAAAACCCTACTCAAATCCAAACCATTCACAACACAGATG
JMFF013H12+ ATTCTGTTCTCTCATTGCAACAAAACCCTACTCAAATCCAAACCATTCACAACACAGATG
JMFF024P23+ ATTCTGTTCTCTCATTGCAACAAAACCCTACTCAAATCCAAACCATTCACAACACAGATG
JMFF007I03+ ATTCTGTTCTCTCATTGCAACAAAACCCTACTCAAATCCAAACCATTCACAACACAGATG
JMFF018G15+ ATTCTGTTCTCTCATTGCAACAAAACCCTACTCAAATCCAAACCATTCACAACACAGATG
____________________________________________________________
consensus ATTCTGTTCTCTCATTGCAACAAAACCCTACTCAAATCCAAACCATTCACAACACAGATG
. : . : . : . : . : . :
JMFF042I08+ AACACAAACTTTCCAAATTGAAGATTTTGAAGCTAAAGGGTTCACTCACCTCTGATCTGT
JMFF013H12+ AACACAAACTTTCCAAATTGAAGATTTTGAAGCTAAAGGGTTCACTCACCTCTGATCTGT
JMFF024P23+ AACACAAACTTTCCAAATTGAAGATTTTGAAGCTAAAGGGTTCACTCACCTCTGATCTGT
JMFF007I03+ AACACAAACTTTCCAAATTGAAGATTTTGAAGCTAAAGGGTTCACTCACCTCTGATCTGT
JMFF018G15+ AACACAAACTTTCCAAATTGAAGATTTTGAAGCTAAAGGGTTCACTCACCTCTGATCTGT
____________________________________________________________
consensus AACACAAACTTTCCAAATTGAAGATTTTGAAGCTAAAGGGTTCACTCACCTCTGATCTGT
. : . : . : . : . : . :
JMFF042I08+ TTACTCCATAGACACCTTTAATCAATGAAAAACTGGATCTTGAAGTTCGACAATGCCTCA
JMFF013H12+ TTACTCCATAGACACCTTTAATCAATGAAAAACTGGATCTTGAAGTTCGACAATGCCTCA
JMFF024P23+ TTACTCCATAGACACCTTTAATCAATGAAAAACTGGATCTTGAAGTTCGACAATGCCTCA
JMSF017A10+ TCCATAGACACCTTTAATCAATGAAAAACTGGATCTTGAAGTTCGACAATGCCTCA
JMFF007I03+ TTACTCCATAGACACCTTTAATCAATGAAAAACTGGATCTTGAAGTTCGACAATGCCTCA
JMFF018G15+ TTACTCCATAGACACCTTTAATCAATGAAAAACTGGATCTTGAAGTTCGACAATGCCTCA
____________________________________________________________
consensus TTACTCCATAGACACCTTTAATCAATGAAAAACTGGATCTTGAAGTTCGACAATGCCTCA
. : . : . : . : . : . :
JMFF042I08+ AACTTCAATGGCGGGCTAGCTTTAATCTTCTTTTGTTTTTGAAGGAAACACTGGATCTTG
JMFF013H12+ AACTTCAATGGCGGGCTAGCTTTAATCTTCTTTTGTTTTTGAAGGAAACACTGGATCTTG
JMFF024P23+ AACTTCAATGGCGGGCTAGCTTTAATCTTCTTTTGTTTTTGAAGGAAACACTGGATCTTG
JMSF017A10+ AACTTCAATGGCGGGCTAGCTTTAATCTTCTTTTGTTTTTGAAGGAAACACTGGATCTTG
JMFF007I03+ AACTTCAATGGCGGGCTAGCTTTAATCTTCTTTTGTTTTTGAAGGAAACACTGGATCTTG
JMFF018G15+ AACTTCAATGGCGGGCTAGCTTTAATCTTCTTTTGTTTTTGAAGGAAACACTGGATCTTG
____________________________________________________________
consensus AACTTCAATGGCGGGCTAGCTTTAATCTTCTTTTGTTTTTGAAGGAAACACTGGATCTTG
. : . : . : . : . : . :
JMFF042I08+ TAGTTGCGAGTGTGAATAATGACTGAATCTAAACTCAAGAATTCCGTTTATGCGCTCTCT
JMFF013H12+ TAGTTGCGAGTGTGAATAATGACTGAATCTAAACTCAAGAATTCCGTTTATGCGCTCTCT
JMFF024P23+ TAGTTGCGAGTGTGAATAATGACTGAATCTAAACTCAAGAATTCCGTTTATGCGCTCTCT
JMSF017A10+ TAGTTGCGAGTGTGAATAATGACTGAATCTAAACTCAAGAATTCCGTTTATGCGCTCTCT
JMFF007I03+ TAGTTGCGAGTGTGAATAATGACTGAATCTAAACTCAAGAATTCCGTTTATGCGCTCTCT
JMFF018G15+ TAGTTGCGAGTGTGAATAATGACTGAATATAAACTCAGGAATTCCGTTTATGCGCTCTCT
____________________________________________________________
consensus TAGTTGCGAGTGTGAATAATGACTGAATCTAAACTCAAGAATTCCGTTTATGCGCTCTCT
. : . : . : . : . : . :
JMFF042I08+ CTCCAGAAGTTCTTGGAAGAAGAATTGGGTTGTGAAGAAAGCTTGGATCTTGAAGATGGT
JMFF013H12+ CTCCAGAAGTTCTTGGAAGAAGAATTGGGTTGTGAAGAAAGCTTGGATCTTGAAGATGGT
JMFF024P23+ CTCCAGAAGTTCTTGGAAGAAGAATTGGGTTGTGAAGAAAGCTTGGATCTTGAAGATGGT
JMSF017A10+ CTCCAGAAGTTCTTGGAAGAAGAATTGGGTTGTGAAGAAAGCTTGGATCTTGAAGATGGT
JMFF007I03+ CTCCAGAAGTTCTTGGAAGAAGAATTGGGTTGTGAAGAAAGCTTGGATCTTGAAGATGGT
JMFF018G15+ CTCCAGAAGTTCTTGGAAGAAGAATTGGGTTGTGAAGAAAGCTTGGATCTTGAAGATGGT
____________________________________________________________
consensus CTCCAGAAGTTCTTGGAAGAAGAATTGGGTTGTGAAGAAAGCTTGGATCTTGAAGATGGT
. : . : . : . : . : . :
JMFF042I08+ TTCCAGAATCTGGGTACTATAGCGCTAAAGGAGGGTATGTCTGTATGT
JMFF013H12+ TTCCAGAATCTGGGTACTATAGCGCTAAAGGAGGGTATGTCTGTATGT
JMFF024P23+ TTCCAGAATCTGGGTACTATAACGCT
JMSF017A10+ TTCCAGAATCT
JMFF007I03+ TTCCAGAATCTGGGTACTATAGCGCTAAAGGAGGGTATGTCTGTATGT
JMFF018G15+ TTCCAGAATCTGGGTACTATAGCGCTAAAGGAGGGTATGTCTGTATGTATAATGTATGTA
____________________________________________________________
consensus TTCCAGAATCTGGGTACTATAGCGCTAAAGGAGGGTATGTCTGTATGTATAATGTATGTA
. : . : . : . : . : . :
JMFF018G15+ TCATGCATTGATTAGATTTGAAGGAAGCTATAGAATATGGAGGAAAATAGAGACAGATCT
____________________________________________________________
consensus TCATGCATTGATTAGATTTGAAGGAAGCTATAGAATATGGAGGAAAATAGAGACAGATCT