Contig 012866:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF017J24-                                        CATAAAAAAGAAAAGGATTAACCTTTTTAC
                      ____________________________________________________________
consensus                                           CATAAAAAAGAAAAGGATTAACCTTTTTAC
 
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rJMFF017J24-          AGTGGGTTAGAATACTAAAAATAAGCACCACTGTAAAAAAGACAAAAAAAAAATTAACCA
                      ____________________________________________________________
consensus             AGTGGGTTAGAATACTAAAAATAAGCACCACTGTAAAAAAGACAAAAAAAAAATTAACCA
 
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rJMFF017J24-          CNTCTCTTTANAACCCAGCANAATACATTGATTTGAAATCTGCGTTCAAGGATGGTAAAA
                      ____________________________________________________________
consensus             CNTCTCTTTANAACCCAGCANAATACATTGATTTGAAATCTGCGTTCAAGGATGGTAAAA
 
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JMFF050N09+                                 CCGGCCGAACATGAACCGGGCATTGCTAACTGTTAGAG
rJMFF017J24-          ATTACCCTANACGCTAAACCGGCCGGCCGAACATGAACCGGGCATTGCTAACTGTTANAN
JMFF017J24+                                                CCGGGCATTGNTANCTGTTAGAG
                      ____________________________________________________________
consensus             ATTACCCTANACGCTAAACCGGCCGGCCGAACATGAACCGGGCATTGCTAACTGTTAGAG
 
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JMFF050N09+           AGAAGGTCAAACACGGGTCTTCTGTAGCAGGGGAGAAATGACAAGGGAAGCCGCCTCTCT
rJMFF017J24-          ANAAGGTCAAACACGGGTCTTCTGTANCAGGGGANAAATGACAAGGGAAGCCGCCTCTCT
JMFF017J24+           AGAAGGTCAAACACGGGTCTTNTGTAGCAGGGGAGAAATGACAAGGGAAGCCGCCTCTCT
                      ____________________________________________________________
consensus             AGAAGGTCAAACACGGGTCTTCTGTAGCAGGGGAGAAATGACAAGGGAAGCCGCCTCTCT
 
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JMFF050N09+           ACAGGAATGATCCAACGGTTCAGATATCATCTTCAAGATCTCATCCAAATCCATTCGCCC
rJMFF017J24-          ACAGGAATGATCCAACGGTTCAAATATCATCTTCAANATCTCATCCAAATCCATTCGCCC
JMFF017J24+           ACAGGAATGATCCAACGGTTCAGATATCATCTTCAAGATCTCATCCAAATCCATTCGCCC
                      ____________________________________________________________
consensus             ACAGGAATGATCCAACGGTTCAGATATCATCTTCAAGATCTCATCCAAATCCATTCGCCC
 
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JMFF050N09+           GAACCGGTTCTCGTCTCTCTGGAGCAGCCTCAGCATTCCTTGAAAAAAAACCCGGTTCAC
rJMFF017J24-          GAACCGGTTCTCGTCTCTCTGGAGCAGCCTCAGCATTCCTTG-AAAAAAACCCGGTTCAC
JMFF017J24+           GAACCGGTTCTCGTCTCTCTGGAGCAGCCTCAGCATTCCNTG-AAAAAAACCCGGTTCAC
                      ____________________________________________________________
consensus             GAACCGGTTCTCGTCTCTCTGGAGCAGCCTCAGCATTCCTTG-AAAAAAACCCGGTTCAC
 
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JMFF050N09+           ACGGCAACACCAGCCCGCCGGCGCTCTGGAACCCGAACTCCTCCTCCGCCTTCTCAAGGA
rJMFF017J24-          ACGGCAACACCAGCCCGCCGGCGCTCTGGAACCCNAACTCCTCCTCCGCCTTCTCAAGGA
JMFF017J24+           ACGGCAACACCAGCCCGCCGGCGCTCTGGAACCCGAACTCCTCCTCCGCCTTCTCAAGGA
                      ____________________________________________________________
consensus             ACGGCAACACCAGCCCGCCGGCGCTCTGGAACCCGAACTCCTCCTCCGCCTTCTCAAGGA
 
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JMFF050N09+           GCGAGAGGAAGGCGGGGAGGTTGAGGAACCGGGTCGGGATCACGAAACGACGCCGTTCGT
rJMFF017J24-          GCGANATGAAGGCGGGGAGGTTGAGGAACCGGGTCGGGATCACNAAACGACGCCGTTCGT
JMFF017J24+           GCGAGATGAAGGCGGGGAGGTTGAGGAACCGGGTCGGGATCACGAAACGACGCCGTTCGT
                      ____________________________________________________________
consensus             GCGAGATGAAGGCGGGGAGGTTGAGGAACCGGGTCGGGATCACGAAACGACGCCGTTCGT
 
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JMFF050N09+           GGCCGACGTACACGGCCAGGGAACCCGACCGGATGCGACGATTCCGGCCGGCGGCGGACT
rJMFF017J24-          GGCCGACGTACACGGCCAGGGAACCCGACCGGATGCNACNATTCCGGCCGGCGGCGGACT
JMFF017J24+           GGCCGACGTACACGNCCAGGGAACCCGACCGGATGCGACGATTCCGGCCGGCGGCGGACT
                      ____________________________________________________________
consensus             GGCCGACGTACACGGCCAGGGAACCCGACCGGATGCGACGATTCCGGCCGGCGGCGGACT
 
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JMFF050N09+           CCTCGGATCCCGGAGACGATAGGACGCCCTTCACGGACTTGTTCCTCCACCGCTTCACCA
rJMFF017J24-          CCTCGGATCCCGGANACGATAGGACGCCCTTCACGGACTTGTTCCTCCACCGCTTCACCA
JMFF017J24+           CCTCGGATCCCGGAGACGATAGGACGCCCTTCACGGACTTGTTCCTCCACCGCTTCACCA
                      ____________________________________________________________
consensus             CCTCGGATCCCGGAGACGATAGGACGCCCTTCACGGACTTGTTCCTCCACCGCTTCACCA
 
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JMFF050N09+           CTTGTTTCAGCCGTACGATTCGAGCTATCATGTTGCTCCGGTTGATCGCCATTGACCCAG
rJMFF017J24-          CTTGTTTCAGCCGTACGATTCGAGCTATCATGTTGCTCCGGTTGATCGCCATTGACCCAN
JMFF017J24+           CTTGTTTCAGCCGTACGATTCGAGNTATCATGTTGCTCCGGTTGATCGCCANTGACCCAG
                      ____________________________________________________________
consensus             CTTGTTTCAGCCGTACGATTCGAGCTATCATGTTGCTCCGGTTGATCGCCATTGACCCAG
 
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JMFF050N09+           AGGAATCTGCTTTTACAAATTTCAATTCAAAGTGAGAGAGAGAGA               
rJMFF017J24-          AGGAATCTGCTTTTACAAATTTCAATTCAAAGTGAGAGANAGAGA               
JMFF017J24+           AGGAATCTGCTTTTACAAATTTCAATTCAAAGNGAGAGAGAGAGAGAGAGAGAGAGAGAG
                      ____________________________________________________________
consensus             AGGAATCTGCTTTTACAAATTTCAATTCAAAGTGAGAGAGAGAGAGAGAGAGAGAGAGAG