Contig 012862:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016B12Sequence473012862 (4)ref|XP_006353435.1|2e-18PREDICTED: uncharacterized protein LOC102584643 isoform X1 [Solanum tuberosum] 391015914ref|XP_009630761.1|2e-19PREDICTED: uncharacterized protein LOC104120660 isoform X2 [Nicotiana tomentosi
JMFN008C19Sequence616012862 (4)ref|XP_009630761.1|7e-53PREDICTED: uncharacterized protein LOC104120660 isoform X2 [Nicotiana tomentosi
JMSF005H10Sequence462012862 (4)ref|XP_006353435.1|4e-48PREDICTED: uncharacterized protein LOC102584643 isoform X1 [Solanum tuberosum]
JMSF007G13Sequence422012862 (4)ref|XP_006353435.1|2e-40PREDICTED: uncharacterized protein LOC102584643 isoform X1 [Solanum tuberosum] 743017074

Alignment

This contig is upended


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JMFN008C19+                                  GCGCCGCCGCCGAGGGAGCTGTTGTTAGAGCCGCTAG
                      ____________________________________________________________
consensus                                    GCGCCGCCGCCGAGGGAGCTGTTGTTAGAGCCGCTAG
 
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JMFN008C19+           AATTGGGCTTCGAGGAGCCGCCGGAGTAAACTAGGGCGGTTGGTTTTGCGTTGTTAGGGC
                      ____________________________________________________________
consensus             AATTGGGCTTCGAGGAGCCGCCGGAGTAAACTAGGGCGGTTGGTTTTGCGTTGTTAGGGC
 
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JMSF005H10+                                                             GGCGGCGGAG
JMFN008C19+           TCGATCCGGGCTTGACGGTGAGCGTGATGGTGGTAGATTTTCTCGGCGGCGGCGGCGGAG
                      ____________________________________________________________
consensus             TCGATCCGGGCTTGACGGTGAGCGTGATGGTGGTAGATTTTCTCGGCGGCGGCGGCGGAG
 
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JMSF005H10+           TAGCGGAGGTAGTTCCGACGAGGAAATCGAGGCGGTGGTAGAACGGCCATATCGACGGCG
JMFN008C19+           TAGCGGAGGTAGTTCCGACGAGGAAATCGAGGCGGTGGTAGAACGGCCATATCGACGGCG
                      ____________________________________________________________
consensus             TAGCGGAGGTAGTTCCGACGAGGAAATCGAGGCGGTGGTAGAACGGCCATATCGACGGCG
 
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JMSF005H10+           ACGACTTGGATTTCTCGAGCTTGTACTTTTTCTTCAAAGTATCGACGCGGTTCTTGCACT
JMFN008C19+           ACGACTTGGATTTCTCGAGCTTGTACTTTTTCTTCAAAGTATCGACGCGGTTCTTGCACT
JMSF007G13+                                         TCTTCAAAGTATCGACGCGGTTCTTGCACT
                      ____________________________________________________________
consensus             ACGACTTGGATTTCTCGAGCTTGTACTTTTTCTTCAAAGTATCGACGCGGTTCTTGCACT
 
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JMSF005H10+           GAATATCAGTCCGCTGCGGCTTAACGCCGTCCTGGCGAGAATTAACGGCGTCAGCCACCT
JMFN008C19+           GAATATCAGTCCGCTGCGGCTTAACGCCGTCCTGGCGAGAATTAACGGCGTCAGCCACCT
JMSF007G13+           GAATATCAGTCCGCTGCGGCTTAACGCCGTCCTGGCGAGAATTAACGGCGTCAGCCACCT
                      ____________________________________________________________
consensus             GAATATCAGTCCGCTGCGGCTTAACGCCGTCCTGGCGAGAATTAACGGCGTCAGCCACCT
 
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JMSF005H10+           CCTTCCAGTCCTTCTGACGGAGGTTACCCCTGTTAAGCTTGATATAACGGTCGCCCCAAG
JMFN008C19+           CCTTCCAGTCCTTCTGACGGAGGTTACCCCTGTTAAGCTTGATATAACGGTCGCCCCAAG
JMSF007G13+           CCTTCCAGTCCTTCTGACGGAGGTTACCCCTGTTAAGCTTGATATAACGGTCGCCCCAAG
JMFF016B12+                  GTCCTTCTGACGGAGGTTACCCCTGTTAAGCTTGATATAACGGTCGCCCCAAG
                      ____________________________________________________________
consensus             CCTTCCAGTCCTTCTGACGGAGGTTACCCCTGTTAAGCTTGATATAACGGTCGCCCCAAG
 
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JMSF005H10+           CCTCGATCAGAGTCTCGGTGGCGCCTTCGCTCCAGCAGTCCTCGCGGCCGCCGGCGTGGG
JMFN008C19+           CCTCGATCAGAGTCTCGGTGGCGCCTTCGCTCCAGCAGTCCTCGCGGCCGCCGGCGTGGG
JMSF007G13+           CCTCGATCAGAGTCTCGGTGGCGCCTTCGCTCCAGCAGTCCTCGCGGCCGCCGGCGTGGG
JMFF016B12+           CCTCGATCAGAGTCTCGGTGGCGCCTTCGCTCCAGCAGTCCTCGCGGCCGCCGGCGTGGG
                      ____________________________________________________________
consensus             CCTCGATCAGAGTCTCGGTGGCGCCTTCGCTCCAGCAGTCCTCGCGGCCGCCGGCGTGGG
 
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JMSF005H10+           GCCGCGGCTTGCTCTGCGCGACGGGGGCCTCCATGGAATCCGGCTCAGTCGTCGGCGCTC
JMFN008C19+           GCCGCGGCTTGCTCTGCGCGACGGGGGCCTCCATGGAATCCGGCTCAGTCGTCGGCGCTC
JMSF007G13+           GCCGCGGCTTGCTCTGCGCGACGGGGGCCTCCATGGAATCCGGCTCAGTCGTCGGCGCTC
JMFF016B12+           GCCGCGGCTTGCTCTGCGCGACGGGGGCCTCCATGGAATCCGGCTCAGTCGTCGGCGCTC
                      ____________________________________________________________
consensus             GCCGCGGCTTGCTCTGCGCGACGGGGGCCTCCATGGAATCCGGCTCAGTCGTCGGCGCTC
 
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JMSF005H10+           GAATTTCGCCGGTGGAGAAGAGAGAAAACACCGGGGAAAGAGAAGAAGAGAAGGAGAGGG
JMFN008C19+           GAATTTCGCCGGTGGAGAAGAGAGAAAACACCGGGGAAAGAGAAGAAGAGAAGGAGAGGG
JMSF007G13+           GAATTTCGCCGGTGGAGAAGAGAGAAAACACCGGGGAAAGAGAAGAAGAGAAGGAGAGGG
JMFF016B12+           GAATTTCGCCGGTGGAGAAGAGAGAAAACACCGGGGAAAGAGAAGAAGAGAAGGAGAGGG
                      ____________________________________________________________
consensus             GAATTTCGCCGGTGGAGAAGAGAGAAAACACCGGGGAAAGAGAAGAAGAGAAGGAGAGGG
 
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JMSF005H10+           GAAAGGGAAAGGGAAAGTGAAGGGTTGCCG                              
JMFN008C19+           GAAAGGGAAAGGGAAAGTGAAGGGTTGCCG                              
JMSF007G13+           GAAAGGGAAAGGGAAAGTGAAGGGTTGCCGTACATCTGACCGGAAGAGTGGACGTCAGAA
JMFF016B12+           GAAAGGGAAAGGGAAAGTGAAGGGTTGCCGTACATCTGACCGGAAGAGTGGACGTCAGAA
                      ____________________________________________________________
consensus             GAAAGGGAAAGGGAAAGTGAAGGGTTGCCGTACATCTGACCGGAAGAGTGGACGTCAGAA
 
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JMSF007G13+           GGGTATTGGA                                                  
JMFF016B12+           GGGTATTGGACGGAGTGGGTTGTGACTACGATAGTCTACGATTTTTCCCCACTCATAATT
                      ____________________________________________________________
consensus             GGGTATTGGACGGAGTGGGTTGTGACTACGATAGTCTACGATTTTTCCCCACTCATAATT
 
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JMFF016B12+           TACCCTTCTTTTTCTATGTCATGACTCATGGGAATGAAAAGTCAAACAAGCTTAATTGTC
                      ____________________________________________________________
consensus             TACCCTTCTTTTTCTATGTCATGACTCATGGGAATGAAAAGTCAAACAAGCTTAATTGTC
 
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JMFF016B12+           TCCGGTGAATATTTCTACATTTACCGGCGCTACTGTTTTGTTTCACTCGACGGAGAATCT
                      ____________________________________________________________
consensus             TCCGGTGAATATTTCTACATTTACCGGCGCTACTGTTTTGTTTCACTCGACGGAGAATCT