Contig 012856:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014L17Sequence523012856 (3)ref|XP_009624662.1|1e-18PREDICTED: chromosome-associated kinesin KIF4 [Nicotiana tomentosiformis] ref|XP817012856 (3)gb|KDO81181.1|4e-27hypothetical protein CISIN_1g0085891mg, partial [Citrus sinensis]
JMFN038N05Sequence609012856 (3)ref|XP_009376219.1|5e-18PREDICTED: chromosome-associated kinesin KIF4A [Pyrus x bretschneideri]

Alignment

This contig is upended


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JMFN038N05+                                                         GGAAGTTGGGTACA
rJMFF014L17-                                   ATTTTCCTCGTAGCTTTTTTTGGAAGTTGGGTACA
                      ____________________________________________________________
consensus                                      ATTTTCCTCGTAGCTTTTTTTGGAAGTTGGGTACA
 
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JMFN038N05+           ATGTAACATGACAAAGGAGATAAAAATCAAACATGACCAACTTCCTAAAACAGGGTTTTA
rJMFF014L17-          ATGTAACATGACAAAGGAGATAAAAATCAAACATGACCAACTTCCTAAAACAGGGTTTTA
                      ____________________________________________________________
consensus             ATGTAACATGACAAAGGAGATAAAAATCAAACATGACCAACTTCCTAAAACAGGGTTTTA
 
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JMFN038N05+           AGGTTTTAA-CCATCATCAAGCTTAACATTTAGCACAGATTGCTAGTAAACAGGTTTGGC
rJMFF014L17-          AGGTTTTAACCCATCATCAAGCTTAACATTTAGCACAGATTGCTAGTAAACAGGTTTGGC
                      ____________________________________________________________
consensus             AGGTTTTAACCCATCATCAAGCTTAACATTTAGCACAGATTGCTAGTAAACAGGTTTGGC
 
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JMFN038N05+           CTACCATTAGGCTGAACCTCAAAAACTCACACTTAAGATTGACAAGAATGTTGGAACTTC
rJMFF014L17-          CTACCATTAGGCTGAACCTCAAAAACTCACACTTAAGATTGACAAGAATGTTGGAACTTC
                      ____________________________________________________________
consensus             CTACCATTAGGCTGAACCTCAAAAACTCACACTTAAGATTGACAAGAATGTTGGAACTTC
 
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JMFN038N05+           TCCTAGTAACCAAACCAACAAGAATCAACATCTGTTGAACTAAAAACTCACTGGTTTTCT
rJMFF014L17-          TCCTAGTAACCAAACCAACAAGAATCAACATCTGTTGAACTAAAAACTCACTGGTTTTCT
                      ____________________________________________________________
consensus             TCCTAGTAACCAAACCAACAAGAATCAACATCTGTTGAACTAAAAACTCACTGGTTTTCT
 
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JMFN038N05+           TTCTCGTTCTTCGTCCTTGGCCTCCGTTGAGGGCTTTTGGGAGCTGGCAGGTGAAAATCC
rJMFF014L17-          TTCTCGTTCTTCGTCCTTGGCCTCCGTTGAGGGCTTTTGGGAGCTGGCAGGTGAAAATCC
                      ____________________________________________________________
consensus             TTCTCGTTCTTCGTCCTTGGCCTCCGTTGAGGGCTTTTGGGAGCTGGCAGGTGAAAATCC
 
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JMFN038N05+           TTATCATGAACAGAAGAATCACTGGAGCTAGAGTTTCTATCTTTCAGGGTGTTATTGGCT
rJMFF014L17-          TTATCATGAACAGAAGAATCACTGGAGCTAGAGTTTCTATCTTTCAGGGTGTTATTGGCT
                      ____________________________________________________________
consensus             TTATCATGAACAGAAGAATCACTGGAGCTAGAGTTTCTATCTTTCAGGGTGTTATTGGCT
 
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JMFN038N05+           AATGTAGAACTGATGGCTCGCGGCAACTTCAATGGAATGTCAGGAGTCTCTGTCGTGTTG
rJMFF014L17-          AATGTAGAACTGATGGCTCGCGGCAACTTCAATGGAATGTCGGGAGTCTCTGTCGTGTTG
                      ____________________________________________________________
consensus             AATGTAGAACTGATGGCTCGCGGCAACTTCAATGGAATGTCGGGAGTCTCTGTCGTGTTG
 
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JMFN038N05+           TTGATGTTATCTGGTTTTGTTGGAGCTGCAGAATTTTGATCTTGAGAAGTGGCAGGAGCA
rJMFF014L17-          TTGATGTTATCTGGTTTTGTTGGAGCTGCAGAATTTTGATCTTGAGAAGTGGCAGGAGCA
                      ____________________________________________________________
consensus             TTGATGTTATCTGGTTTTGTTGGAGCTGCAGAATTTTGATCTTGAGAAGTGGCAGGAGCA
 
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JMFN038N05+           GGTTGTGCAGAAGGAACGAGTTGAATGACAGATTTTCGCATGGATTTCCGCCATGTCTTT
rJMFF014L17-          GGTTGTGCAGAAGGAACGAGTTGAATGACAGATTTTCGCATGGATTTCCGCCATGTCTTT
                      ____________________________________________________________
consensus             GGTTGTGCAGAAGGAACGAGTTGAATGACAGATTTTCGCATGGATTTCCGCCATGTCTTT
 
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JMFN038N05+           CTCTGATTCGGTGGTTTAGGAGCATTGGATTTCACCAGCGTATTTCCAATATCAGA    
rJMFF014L17-          CTCTGATTCGGTGGTTTAGGAGCATTGGATTTCACCAGCGTATTTCCAATATCAGAGAGA
JMFF014L17+                            AGGAGCATTGGATTTCACCAGCGTATTTCCAATATCAGAGAGA
                      ____________________________________________________________
consensus             CTCTGATTCGGTGGTTTAGGAGCATTGGATTTCACCAGCGTATTTCCAATATCAGAGAGA
 
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rJMFF014L17-          GGTTTTCTTTTGGATCCCGCTTCATCCTTTGTCTCAGTCTTATCTGAAAAGGCGGTTTGG
JMFF014L17+           GGTTTTCTTTTGGATCCCGCTTCATCCTTTGTCTCAGTCTTATCTGAAAAGGCGGTTTGG
                      ____________________________________________________________
consensus             GGTTTTCTTTTGGATCCCGCTTCATCCTTTGTCTCAGTCTTATCTGAAAAGGCGGTTTGG
 
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rJMFF014L17-          AGTANCATCGCACCCTGAGAAGCCAGAGCTTTTTCGCCCTCAGTTTCACCATCACCTTCT
JMFF014L17+           AGTAGCATCGCACCCTGAGAAGCCAGAGCTTTTTCGCCCTCAGTTTCACCATCACCTTCT
                      ____________________________________________________________
consensus             AGTAGCATCGCACCCTGAGAAGCCAGAGCTTTTTCGCCCTCAGTTTCACCATCACCTTCT
 
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rJMFF014L17-          GTGGTGTTTCCGGTATGCTCANAAGATTTATTTGCATTGTGTTCCACGTTACTGCACTTG
JMFF014L17+           GTGGTGTTTCCGGTATGCTCAGAAGATTTATTTGCATTGTGTTCCACGTTACTGCACTTG
                      ____________________________________________________________
consensus             GTGGTGTTTCCGGTATGCTCAGAAGATTTATTTGCATTGTGTTCCACGTTACTGCACTTG
 
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rJMFF014L17-          GA                                                          
JMFF014L17+           GAAGACCGACATGACACAACGCAATCGCGTCCTGCAGCTCGACACTCGCACCTTTGCGTT
                      ____________________________________________________________
consensus             GAAGACCGACATGACACAACGCAATCGCGTCCTGCAGCTCGACACTCGCACCTTTGCGTT
 
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JMFF014L17+           TTGCAGGACGAGCTCTTACTGCATTGGCAGCAAGGTGGAATGTACTCTACGTCAGAATCA
                      ____________________________________________________________
consensus             TTGCAGGACGAGCTCTTACTGCATTGGCAGCAAGGTGGAATGTACTCTACGTCAGAATCA
 
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JMFF014L17+           TTATCATTGTTGTCTGAATCTGATATCTCCATGTCCATATCTTCTAACAGTCCTCCACCA
                      ____________________________________________________________
consensus             TTATCATTGTTGTCTGAATCTGATATCTCCATGTCCATATCTTCTAACAGTCCTCCACCA
 
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JMFF014L17+           TTGTAAACAAAGGAACTACGGCTTCCCTTTGGCCTTAGGTCATAAACGTGTCCGTGGTGC
                      ____________________________________________________________
consensus             TTGTAAACAAAGGAACTACGGCTTCCCTTTGGCCTTAGGTCATAAACGTGTCCGTGGTGC
 
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JMFF014L17+           CCATTATTCTCCACCTTGGACTGTTTCTTTGAAACCAGCTTCTTGATTTGTTGCTCCTTA
                      ____________________________________________________________
consensus             CCATTATTCTCCACCTTGGACTGTTTCTTTGAAACCAGCTTCTTGATTTGTTGCTCCTTA