| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010P06 | Sequence | 594 | 012845 (6) | gb|ABB54381.2| | 1e-93 | FVE [Ipomoea nil] | 776 | 005724 (6) | gb|KCW53598.1| | 1e-112 | hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis] |
| JMFF041E02 | Sequence | 644 | 012845 (6) | ref|XP_010242216.1| | 4e-113 | PREDICTED: WD-40 repeat-containing protein MSI4-like [Nelumbo nucifera] | 614 | 005724 (6) | ref|XP_009762754.1| | 3e-71 | PREDICTED: WD-40 repeat-containing protein MSI4-like, partial [Nicotiana sylves |
| JMFF046K13 | Sequence | 618 | 012845 (6) | ref|XP_008228297.1| | 6e-111 | PREDICTED: WD-40 repeat-containing protein MSI4-like [Prunus mume] | 535 | 005724 (6) | gb|KCW53598.1| | 4e-54 | hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis] |
| JMFF049E05 | Sequence | 529 | 012845 (6) | gb|ABB54381.2| | 4e-93 | FVE [Ipomoea nil] | 540 | 005724 (6) | gb|KCW53598.1| | 2e-43 | hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis] |
| JMSF030J04 | Sequence | 654 | 012845 (6) | ref|XP_010242216.1| | 7e-115 | PREDICTED: WD-40 repeat-containing protein MSI4-like [Nelumbo nucifera] | 738 | 005724 (6) | gb|KCW53598.1| | 3e-80 | hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis] |
| JMSF034K08 | Sequence | 676 | 012845 (6) | ref|XP_010242216.1| | 3e-124 | PREDICTED: WD-40 repeat-containing protein MSI4-like [Nelumbo nucifera] | 782 | 005724 (6) | gb|KCW53598.1| | 3e-115 | hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis] |
This contig is upended
. : . : . : . : . : . :
JMFF046K13+ CAAGTGCAAATTCAGCATA
JMSF034K08+ TCCCTCCAGATAGCACAAAGGGCTCCGTTGGGCACATGGCAAGTGCAAATTCAGCATT
JMFF041E02+ CAAGTGCAAATTCAGCATT
JMSF030J04+ CAAGTGCAAATTCAGCATT
____________________________________________________________
consensus TCCCTCCAGATAGCACAAAGGGCTCCGTTGGGCACATGGCAAGTGCAAATTCAGCATT
. : . : . : . : . : . :
JMFF046K13+ TTCTGNATGACCTGTCAACACCAAGTCTGGCTAGAGTNCAGAGGCTCCCAAAACAGCATG
JMSF034K08+ ATCTTGATGACCTGTCAACACCAAGTCTGGCTTAGAGTCAGAGGCTCCCAAAACAGCATG
JMFF041E02+ ATCTTGATGACCTGTCAACACCAAGTCTGGCTTAGAGTCAGAGGCTCCCAAAACAGCATG
JMSF030J04+ ATCTTGATGACCTGTCAACACCAAGTCTGGCTTAGAGTCAGAGGCTCCCAAAACAGCATG
____________________________________________________________
consensus ATCTTGATGACCTGTCAACACCAAGTCTGGCTTAGAGTCAGAGGCTCCCAAAACAGCATG
. : . : . : . : . : . :
JMFF046K13+ TCGACTAGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
JMSF034K08+ TCGACTAGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
JMFF049E05+ TAGGCTGAGACTCAACATCCCAGATGAGACCATCCGGACTGTCAGTGTGTGTGGC
JMFF041E02+ TCGACTAGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
JMSF030J04+ TCGACTAGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
JMFF010P06+ AGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
____________________________________________________________
consensus TCGACTAGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
. : . : . : . : . : . :
JMFF046K13+ CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
JMSF034K08+ CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
JMFF049E05+ CACTATCTGGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
JMFF041E02+ CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
JMSF030J04+ CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
JMFF010P06+ CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
____________________________________________________________
consensus CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
. : . : . : . : . : . :
JMFF046K13+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
JMSF034K08+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
JMFF049E05+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
JMFF041E02+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
JMSF030J04+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
JMFF010P06+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
____________________________________________________________
consensus TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
. : . : . : . : . : . :
JMFF046K13+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
JMSF034K08+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
JMFF049E05+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
JMFF041E02+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
JMSF030J04+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
JMFF010P06+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
____________________________________________________________
consensus TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
. : . : . : . : . : . :
JMFF046K13+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
JMSF034K08+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
JMFF049E05+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
JMFF041E02+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
JMSF030J04+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
JMFF010P06+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
____________________________________________________________
consensus ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
. : . : . : . : . : . :
JMFF046K13+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
JMSF034K08+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
JMFF049E05+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
JMFF041E02+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
JMSF030J04+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
JMFF010P06+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
____________________________________________________________
consensus CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
. : . : . : . : . : . :
JMFF046K13+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
JMSF034K08+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
JMFF049E05+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
JMFF041E02+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
JMSF030J04+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
JMFF010P06+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
____________________________________________________________
consensus GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
. : . : . : . : . : . :
JMFF046K13+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
JMSF034K08+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
JMFF049E05+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
JMFF041E02+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
JMSF030J04+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
JMFF010P06+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
____________________________________________________________
consensus ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
. : . : . : . : . : . :
JMFF046K13+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCT
JMSF034K08+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCTCAAGCG
JMFF049E05+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCT
JMFF041E02+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCTCAAGCG
JMSF030J04+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCTCAAGCG
JMFF010P06+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCTCAAGCG
____________________________________________________________
consensus CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCTCAAGCG
. : . : . : . : . : . :
JMSF034K08+ CAAACCACTGCTACGCT
JMFF041E02+ CAAACCACTGCTACGCT
JMSF030J04+ CAAACCACTGCTACGCTGCCCTTCC
JMFF010P06+ CAAACCACTGCTACGCTGCCCTTCCACTTAGGTACTTGTGGCCTTTTCCCCCGGTATATC
____________________________________________________________
consensus CAAACCACTGCTACGCTGCCCTTCCACTTAGGTACTTGTGGCCTTTTCCCCCGGTATATC