Contig 012844:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF010M05-                                 ATGGTTGCAATACCACATAATCTTTCATTTTTGAACC
                      ____________________________________________________________
consensus                                    ATGGTTGCAATACCACATAATCTTTCATTTTTGAACC
 
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rJMFF010M05-          TCCTGTATCAAATCTAGCAAGCATTACAACTATTAGTGTAGTTTTCTCCAGTTCAGCTAC
rJMFF029P13-                    AATCTAGCAAGCATTACAACTATTAGTGTAGTTTTCTCCAGTTCAGCTAC
                      ____________________________________________________________
consensus             TCCTGTATCAAATCTAGCAAGCATTACAACTATTAGTGTAGTTTTCTCCAGTTCAGCTAC
 
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rJMFF010M05-          ACACATTTCTGGATAATGATTGGTTTGTAACTTTCGCGAATGACGGATCAAGTCACAGTC
rJMFF029P13-          ACACATTTCTGGATAATGATTGGTTTGTAACTTTCGCGAATGACGGATCAAGTCACAGTC
                      ____________________________________________________________
consensus             ACACATTTCTGGATAATGATTGGTTTGTAACTTTCGCGAATGACGGATCAAGTCACAGTC
 
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rJMFF010M05-          GACAATCAGCTTTTTAGGATTCAAATGATCCTGATAAATTACACCATTTTCCTAGAGTTA
rJMFF029P13-          GACAATCAGCTTTTTAGGATTCAAATGATCCTGATAAATTACACCATTTTCCTAGAGTTA
                      ____________________________________________________________
consensus             GACAATCAGCTTTTTAGGATTCAAATGATCCTGATAAATTACACCATTTTCCTAGAGTTA
 
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rJMFF010M05-          CCCGCTCTCGCTGGTGTAGAATATCTTGAACCAATAGGACATAACGAGCATCAACCTAGT
rJMFF029P13-          CCCGCTCTCGCTGGTGTAGAATATCTTGAACCAATAGGACATAACGAGCATCAACCTAGT
                      ____________________________________________________________
consensus             CCCGCTCTCGCTGGTGTAGAATATCTTGAACCAATAGGACATAACGAGCATCAACCTAGT
 
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rJMFF010M05-          CTTGCTTCTCTTCGTAGAACCTCATCAGAAAATTTAATCAAAATGGTAGTCCGAGGTCGC
rJMFF029P13-          CTAGCTTCTCTTCGTAGAACCTCATCAGAAAATTTAATCAAAATGGTAGTCCGAGGTCGC
                      ____________________________________________________________
consensus             CTTGCTTCTCTTCGTAGAACCTCATCAGAAAATTTAATCAAAATGGTAGTCCGAGGTCGC
 
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rJMFF010M05-          TGCTGCCCCTCCACTGGAACAAAATGGGCAGTTACAACAGCTGGGAAACCGGCATTGTCA
rJMFF029P13-          TGCTGCCCCTCCACTGGAACAAAATGGGCAGTTACAACAGCTGGGAAACCGGCATTGTCA
JMFF010M05+                          GGAACAAAATGGGCAGTTACAACAGCTGGGAAACCGGCATTGTCA
                      ____________________________________________________________
consensus             TGCTGCCCCTCCACTGGAACAAAATGGGCAGTTACAACAGCTGGGAAACCGGCATTGTCA
 
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rJMFF010M05-          AGTACACCCCTTACAATGCCCGCAACAAAAGCTCCACAATTGAAAGCACCCATATCTTTA
rJMFF029P13-          AGTACACCCCTTACAATGCCCGCAACAAAAGCTCCACAATTGAAAGCACCCATATCTTTA
JMFF010M05+           AGTACACCCCTTACAATGCCCGCAACAAAAGCTCCACAATTGAAAGCACCCATATCTTTA
                      ____________________________________________________________
consensus             AGTACACCCCTTACAATGCCCGCAACAAAAGCTCCACAATTGAAAGCACCCATATCTTTA
 
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rJMFF010M05-          GGAATTGAGATAAATCTGTTCACAAGGAGCTCCTTTTCGCTGATCATATATTCATCTTCA
rJMFF029P13-          GGAATTGAGATAAATCTGTTCACAAGGAGCTCCTTTTCGCTGATCATATATTCATCTTCA
JMFF029P13+                                                  CTGATCATATANTCATCTTCA
JMFF010M05+           GGAATTGAGATAAATCTGTTCACAAGGAGCTCCTTTTCGCTGATCATATATTCATCTTCA
                      ____________________________________________________________
consensus             GGAATTGAGATAAATCTGTTCACAAGGAGCTCCTTTTCGCTGATCATATATTCATCTTCA
 
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rJMFF010M05-          TGTTCAGTACCCTTCTCAAGGGAGTCAGCAACCTTTCCAAACAAAACCTTCCACACA-GT
rJMFF029P13-          TGTTCAGTACCCTTCTCAAGGGAGTCAGCAACCTTTCCAAACAAAACCTTCCACACA-GT
JMFF029P13+           TGTTCAGTACCCTTCTCAAGGGAGTCAGCAACCTTTCCAAACAAAACCTTCCACACA-GT
JMFF010M05+           TGTTCAGTACCCTTCTCAAGGGAGTCAGCAACCTTTCCAAACAAAACCTTCCACACAGGT
                      ____________________________________________________________
consensus             TGTTCAGTACCCTTCTCAAGGGAGTCAGCAACCTTTCCAAACAAAACCTTCCACACA-GT
 
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rJMFF010M05-          GCTGTGCACAAAGGACAAAATACCTAGCAACCGTGTCTCCCTTCTATTTCCCTTTTCTCG
rJMFF029P13-          GCTGTGCACAAAGGACAAAATACCTAGCAACCGTGTCTCCCTTCTATTTCCCTTTTCTCG
JMFF029P13+           GCTGTGCACAAAGGACAAAATACCTAGCAACCGTGTCTCCCTTCTATTTCCCTTTTCTCG
JMFF010M05+           GCTGTGCACAAAGGACAAAATACCTAGCAACCGTGTCTCCCTTCTATTTCCCTTTTCTCG
                      ____________________________________________________________
consensus             GCTGTGCACAAAGGACAAAATACCTAGCAACCGTGTCTCCCTTCTATTTCCCTTTTCTCG
 
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rJMFF010M05-          ATGGCAGAGAAGTTCCAGAACTCGTGCCCCAACAGCATAGCCTGCATCCTCTAACCTTCT
rJMFF029P13-          ATGGCAGAGAAGTTCCAGAACTCGTGCCCCAACAGCATAGCCTGCATCCTCTAACCTTCT
JMFF029P13+           ATGGCAGAGAAGTTCCAGAACTCGTGCCCCAACAGCATAGCCTGCATCCTCTAACCTTCT
JMFF010M05+           ATGGCAGAGAAGTTCCAGAACTCGTGCCCCAACAGCATAGCCTGCATCCTCTAACCTTCT
                      ____________________________________________________________
consensus             ATGGCAGAGAAGTTCCAGAACTCGTGCCCCAACAGCATAGCCTGCATCCTCTAACCTTCT
 
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rJMFF010M05-          TTCCAATTCAGCAATGTTATCAACTTGGGTCTGATTGTACTGAACAAGC           
rJMFF029P13-          TTCCAATTCAGCAATGTTATCAACTTGGGTCTGATTGTACTGAACAAGCTCCGAGAACAA
JMFF029P13+           TTCCAATTCAGCAATGTTATCAACTTGGGTCTGATTGTACTGAACAAGCTCCGAGAACAA
JMFF010M05+           TTCCAATTCAGCAATGTTATCAACTTGGGTCTGATTGTACTGAACAAGCTCCGAGAACAA
                      ____________________________________________________________
consensus             TTCCAATTCAGCAATGTTATCAACTTGGGTCTGATTGTACTGAACAAGCTCCGAGAACAA
 
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rJMFF029P13-          GAATGCAAACGCGCTCAAACTAACCTCTTGTTTGCCC                       
JMFF029P13+           GAATGCAAACGCGCTCAAACTAACCTCTTGTTTGCCCTTGCTGAGAGGTCTATCGAGAAC
JMFF010M05+           GAATGCAAACGCGCTCAAACTAACCTCTTGTTTGCCCTTGCTGAGAGGTCTATCGAGAAC
                      ____________________________________________________________
consensus             GAATGCAAACGCGCTCAAACTAACCTCTTGTTTGCCCTTGCTGAGAGGTCTATCGAGAAC
 
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JMFF029P13+           GTTAGTGTATTGCTTGATTTTCCCAACTCCTATCATCCTCACTGTCCGCAGATCGCCTAC
JMFF010M05+           GTTAGTGTATTGCTTGATTTTCCCAACTCCTATCATCCTCACTGTCCGCAGATCGCCTAC
                      ____________________________________________________________
consensus             GTTAGTGTATTGCTTGATTTTCCCAACTCCTATCATCCTCACTGTCCGCAGATCGCCTAC
 
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JMFF029P13+           CTCTGCGCCTTTTTTCTTCTTTGTTTCAGCTTC                           
JMFF010M05+           CTCTGCGCCTTTTTTCTTCTTTGTTTCAGCTTCGAGGGGTTTGTGAGTCGTGCGTGGAAT
                      ____________________________________________________________
consensus             CTCTGCGCCTTTTTTCTTCTTTGTTTCAGCTTCGAGGGGTTTGTGAGTCGTGCGTGGAAT