Contig 012841:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010D08Sequence575012841 (3)ref|XP_010322267.1|9e-69PREDICTED: CONSTANS interacting protein 2b isoform X2 [Solanum lycopersicum]770012841 (3)emb|CDO99003.1|4e-97unnamed protein product [Coffea canephora]
JMFN015B13Sequence633012841 (3)emb|CDO99003.1|9e-93unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF010D08-                              TTTGGCATTACTTCTATCTCAAAATATTACAACCTTAACA
                      ____________________________________________________________
consensus                                 TTTGGCATTACTTCTATCTCAAAATATTACAACCTTAACA
 
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rJMFF010D08-          ACATTCTTTTTCACTTTTTAATTAAAATATACATGATAGAAGGCATAGAGTTTATGGCAT
                      ____________________________________________________________
consensus             ACATTCTTTTTCACTTTTTAATTAAAATATACATGATAGAAGGCATAGAGTTTATGGCAT
 
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rJMFF010D08-          GCCAGATTGAGCTACACTATAAAAAAACAACAGGAAGCTGAGTGCTTCATATTCCATCCT
                      ____________________________________________________________
consensus             GCCAGATTGAGCTACACTATAAAAAAACAACAGGAAGCTGAGTGCTTCATATTCCATCCT
 
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rJMFF010D08-          GTATTCACTTTTATACTATGCAGCCTGCTTGCTCAATGATGTGTCCAGTGCTCAGGTAGT
                      ____________________________________________________________
consensus             GTATTCACTTTTATACTATGCAGCCTGCTTGCTCAATGATGTGTCCAGTGCTCAGGTAGT
 
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JMFN015B13+                                        TGCTTATGAATCTGATGGTGGTTGCTGCTGC
rJMFF010D08-          ACTATTATTTCATCCCGGTTTCTGACTCCTGCTTATGAATCTGATGGTGGTTGCTGCTGC
                      ____________________________________________________________
consensus             ACTATTATTTCATCCCGGTTTCTGACTCCTGCTTATGAATCTGATGGTGGTTGCTGCTGC
 
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JMFN015B13+           TGCTGAGGCCACATTGGCTGAGCCATATAGGGACGAGGCTGCTGACCATAAGGAGTTTGA
rJMFF010D08-          TGCTGAGGCCACATTGGCTGAGCCATATAGGGACGAGGCTGCTGACCATAAGGAGTTTGA
                      ____________________________________________________________
consensus             TGCTGAGGCCACATTGGCTGAGCCATATAGGGACGAGGCTGCTGACCATAAGGAGTTTGA
 
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JMFN015B13+           TCCACTGGCTTACCCATATACATCCCTGAGGTTCCAACCTGAGGAGCAGATTGTGCTTGC
rJMFF010D08-          TCCACTGGCTTACCCATATACATCCCTGAGGTTCCAACCTGAGGAGCAGATTGTGCTTGC
                      ____________________________________________________________
consensus             TCCACTGGCTTACCCATATACATCCCTGAGGTTCCAACCTGAGGAGCAGATTGTGCTTGC
 
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JMFN015B13+           ATGTAGTAGTATGGAAGCTCTGCAGGTCCACCAACAGGAAGGGTTCCTCTAGGGATTGAT
rJMFF010D08-          ATGTAGTAGTATGGAAGCTCTGCAGGTCCACCAACAGGAAGGGTTCCTCTAGGGATTGAT
                      ____________________________________________________________
consensus             ATGTAGTAGTATGGAAGCTCTGCAGGTCCACCAACAGGAAGGGTTCCTCTAGGGATTGAT
 
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JMFN015B13+           GCAAGCACCTCATCTTTCAAATCCTCTCTTGGCACAATGTCGACCAAGAAATCAAAGATG
rJMFF010D08-          GCAAGCACCTCATCTTTCAAATCCTCTCTTGGCACAATGTCGACCAAGAAATCAAAGATG
JMFF010D08+                                    CTCTTGGCACAATGTCGACCAAGAAATCAAAGATG
                      ____________________________________________________________
consensus             GCAAGCACCTCATCTTTCAAATCCTCTCTTGGCACAATGTCGACCAAGAAATCAAAGATG
 
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JMFN015B13+           TCAGTCCTTGTAATGGCTGCAGCAATGTCGTTTTTCTGAAGTGTCCTCCTTTTGTTCTCC
rJMFF010D08-          TCAGTCCTTGTAATGGCTGCAGCAATGTCGTTTTTCTGAAGTGTCCTCCTTTTGTTCTCC
JMFF010D08+           TCAGTCCTTGTAATGGCTGCAGCAATGTCGTTTTTCTGAAGTGTCCTCCTTTTGTTCTCC
                      ____________________________________________________________
consensus             TCAGTCCTTGTAATGGCTGCAGCAATGTCGTTTTTCTGAAGTGTCCTCCTTTTGTTCTCC
 
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JMFN015B13+           TCTGTGTGGTTCCATGCACGCAGTGTCAACTCAAGGATAAACATCTCACAAGCCCGGGCA
rJMFF010D08-          TCTGTGTGGTTCCATGCACGCAGTGTCAACTCAAGGATAAACATCTCACAAGCCCGGGCA
JMFF010D08+           TCTGTGTGGTTCCATGCACGCAGTGTCAACTCAAGGATAAACATCTCACAAGCCCGGGCA
                      ____________________________________________________________
consensus             TCTGTGTGGTTCCATGCACGCAGTGTCAACTCAAGGATAAACATCTCACAAGCCCGGGCA
 
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JMFN015B13+           AAAACAACAGGTGCTTCTGCTGATATCATCCTAACATCTTCGTCTGCCTTCATGATTTTC
rJMFF010D08-          AAAACAACAGGTGCTTCTGCTGATATCATCCTAACATCTTCGTCTGCCTTCATGATTTTC
JMFF010D08+           AAAACAACAGGTGCTTCTGCTGATATCATCCTAACATCTTCGTCTGCCTTCATGATTTTC
                      ____________________________________________________________
consensus             AAAACAACAGGTGCTTCTGCTGATATCATCCTAACATCTTCGTCTGCCTTCATGATTTTC
 
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JMFN015B13+           TTGATCCTTGCCAACGGCAAGCTATGGTTCTTGAAATCAG                    
rJMFF010D08-          TTGATCCTTGCCAACGGCAAGCTATGGTTCTTGAAATCAGTAACCTGTTCAATTTCTTGG
JMFF010D08+           TTGATCCTTGCCAACGGCAAGCTATGGTTCTTGAAATCAGTAACCTGTTCAATTTCTTGG
                      ____________________________________________________________
consensus             TTGATCCTTGCCAACGGCAAGCTATGGTTCTTGAAATCAGTAACCTGTTCAATTTCTTGG
 
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rJMFF010D08-          TATTGATTTG                                                  
JMFF010D08+           TATTGATTTGCCCAGAAAGCCTGAAGTTGTTGCTGCAACTGTTGTTGCTGCTGTTGGTGT
                      ____________________________________________________________
consensus             TATTGATTTGCCCAGAAAGCCTGAAGTTGTTGCTGCAACTGTTGTTGCTGCTGTTGGTGT
 
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JMFF010D08+           ATGTGCTGATATGCGAGCTGATGTTGTGCCATCTGAGATGAAGAGGCGGGAAGACCTGGT
                      ____________________________________________________________
consensus             ATGTGCTGATATGCGAGCTGATGTTGTGCCATCTGAGATGAAGAGGCGGGAAGACCTGGT
 
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JMFF010D08+           GGTGGCTGTCCGTTTCCATGCTGATCCATTTCACCTCTTTCAACTTGCAGGGAAACTCAG
                      ____________________________________________________________
consensus             GGTGGCTGTCCGTTTCCATGCTGATCCATTTCACCTCTTTCAACTTGCAGGGAAACTCAG
 
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JMFF010D08+           GGATATTTTATTTCCTGAACAGAAATTATCGCCGGTGAATTCTTGCTTCCTCCCGGCGAT
                      ____________________________________________________________
consensus             GGATATTTTATTTCCTGAACAGAAATTATCGCCGGTGAATTCTTGCTTCCTCCCGGCGAT
 
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JMFF010D08+           AAAACAAAAACAAAGAAGAAAAAAGCGAAGGTTGAAGAGAGAGAGAGAGAGAGTGTGTGT
                      ____________________________________________________________
consensus             AAAACAAAAACAAAGAAGAAAAAAGCGAAGGTTGAAGAGAGAGAGAGAGAGAGTGTGTGT