Contig 012837:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008P12Sequence562012837 (2)ref|XP_006361963.1|2e-53PREDICTED: protein NEDD1-like isoform X1 [Solanum tuberosum] ref|XP_006361964.1|727019067emb|CDP00148.1|3e-60unnamed protein product [Coffea canephora]
JMFS054H05Sequence631012837 (2)emb|CDP00148.1|3e-107unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS054H05+                                  TAACCAACAAGTGTCTGCTAATCCTAGAATAATCGAG
                      ____________________________________________________________
consensus                                    TAACCAACAAGTGTCTGCTAATCCTAGAATAATCGAG
 
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JMFS054H05+           CACTCTCAGAACCTGCTCATTAGGATCCTTGAGTTCAGCAGCCCTAGCACCAGAAGCAAG
                      ____________________________________________________________
consensus             CACTCTCAGAACCTGCTCATTAGGATCCTTGAGTTCAGCAGCCCTAGCACCAGAAGCAAG
 
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JMFS054H05+           GTTGTGAAGTATAAGATCCCCATTAAGGCTGATAGAAGCTAGGTGCTCATCTTTACAATT
                      ____________________________________________________________
consensus             GTTGTGAAGTATAAGATCCCCATTAAGGCTGATAGAAGCTAGGTGCTCATCTTTACAATT
 
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JMFS054H05+           GTACATTGCACCAGTTATTGTATCACTATGACCTTTCAACCATTTAATGCATCGTTTCCG
JMFF008P12+                                                AACCATTTAATGCATCGTTTCCG
                      ____________________________________________________________
consensus             GTACATTGCACCAGTTATTGTATCACTATGACCTTTCAACCATTTAATGCATCGTTTCCG
 
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JMFS054H05+           CTGCAAATCCCATATTCTAACAACTTGACCACTTCCTCCAGAACAAAGATATCTTGATCC
JMFF008P12+           CTGC-AATCCCATATTCTAACAACTTGACCACTTCCTCCAGAACAAAGATATCTTGATCC
                      ____________________________________________________________
consensus             CTGCAAATCCCATATTCTAACAACTTGACCACTTCCTCCAGAACAAAGATATCTTGATCC
 
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JMFS054H05+           TTTATTGTTAAAGTTGATGGTAGAAATGGATTCCTCGATACTATCACCACTATCGCTGCC
JMFF008P12+           TTTATTGTTAAAGTTGATGGTAGAAATGGATTCCTCGATACTGTCACCACTATCGCTGCC
                      ____________________________________________________________
consensus             TTTATTGTTAAAGTTGATGGTAGAAATGGATTCCTCGATACTGTCACCACTATCGCTGCC
 
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JMFS054H05+           TGCTGCCGGAATAGTCCCCAGCGTCTGCCCATTCTTTCTCCACAAGGAAATCTTCTTGTC
JMFF008P12+           TGCTGCCGGAATAGTCCCCAGCGTCTGCCCATTCTTTCTCCACAAGGAAATCTTCTTGTC
                      ____________________________________________________________
consensus             TGCTGCCGGAATAGTCCCCAGCGTCTGCCCATTCTTTCTCCACAAGGAAATCTTCTTGTC
 
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JMFS054H05+           GTCTCCGGCACTAGCCACCACCAAATTGGTGTGGCTCCACTTGACGGAGTTAACTTGCGA
JMFF008P12+           GTCTCCGGCACTAGCCACCACCAAATTGGTGTGGCTCCACTTGACGGAGTTAACTTGCGA
                      ____________________________________________________________
consensus             GTCTCCGGCACTAGCCACCACCAAATTGGTGTGGCTCCACTTGACGGAGTTAACTTGCGA
 
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JMFS054H05+           GCCCGGAGACGGAGTGTAGGTGAGAATGCAGGTGTCGCGAGGCTCCAACGAGAGGTCGAA
JMFF008P12+           GCCCGGAGACGGAGTGTAGGTGAGAATGCAGGTGTCGCGAGGCTCCAACGAGAGGTCGAA
                      ____________________________________________________________
consensus             GCCCGGAGACGGAGTGTAGGTGAGAATGCAGGTGTCGCGAGGCTCCAACGAGAGGTCGAA
 
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JMFS054H05+           GAGCTTCACGGTGTCGCCGCCGCCAGCGGCCAATAGTGCCTTTATCGAATCCGTGGAATT
JMFF008P12+           GAGCTTCACGGTGTCGCCGCCGCCAGCGGCCAATAGTGCCTTTATCGAATCCGTGGAATT
                      ____________________________________________________________
consensus             GAGCTTCACGGTGTCGCCGCCGCCAGCGGCCAATAGTGCCTTTATCGAATCCGTGGAATT
 
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JMFS054H05+           CATCTGCCGCCCTGCGATGCGGGTTTAGAGTGTACGTATACAATTATGAGTGAA      
JMFF008P12+           CATCTGCCGCCCTGCGATGCGGGTTTAGAGTGTACGTATACAATTATGAGTGAAATTATA
                      ____________________________________________________________
consensus             CATCTGCCGCCCTGCGATGCGGGTTTAGAGTGTACGTATACAATTATGAGTGAAATTATA
 
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JMFF008P12+           GCTCCGGCGGATTTGAATTTGCAGTGAAGTAATCAAGTGAAAACAGAAACAACAAAAACA
                      ____________________________________________________________
consensus             GCTCCGGCGGATTTGAATTTGCAGTGAAGTAATCAAGTGAAAACAGAAACAACAAAAACA
 
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JMFF008P12+           AAAACAAAACAAAAAAACTGGGAATTTTTGGAGCTGTGGAGCGAAAAGAGCAGCCTTAGC
                      ____________________________________________________________
consensus             AAAACAAAACAAAAAAACTGGGAATTTTTGGAGCTGTGGAGCGAAAAGAGCAGCCTTAGC