Contig 012832:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008A11Sequence572012832 (2)ref|XP_011097930.1|91.3PREDICTED: 21.7 kDa class VI heat shock protein [Sesamum indicum]725012832 (2)ref|XP_002282763.1|244PREDICTED: 21.7 kDa class VI heat shock protein [Vitis vinifera] emb|CBI20494.3|

Alignment

This contig is upended


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rJMFF008A11-            ATCTGTATGCATTCATGCATGTGTAATCTGCAGATACATACTAAGCGATCTCTGATGA
                      ____________________________________________________________
consensus               ATCTGTATGCATTCATGCATGTGTAATCTGCAGATACATACTAAGCGATCTCTGATGA
 
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rJMFF008A11-          GTCTTTTGCCGCTCCGTTGCTTCCTCGGCCGATTTCGGAATTGGGAGGAGCCTTTGGCAC
                      ____________________________________________________________
consensus             GTCTTTTGCCGCTCCGTTGCTTCCTCGGCCGATTTCGGAATTGGGAGGAGCCTTTGGCAC
 
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rJMFF008A11-          TCTTATCTGCAAAAATATGTCGTTGTTTATGCTCGCCTCTGTTTTCCTCCAATCTGCGTT
                      ____________________________________________________________
consensus             TCTTATCTGCAAAAATATGTCGTTGTTTATGCTCGCCTCTGTTTTCCTCCAATCTGCGTT
 
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rJMFF008A11-          TTCAGGGAGTTCGATCCTCCGCACGTATCCCTGTTCCCACCAATGGCCGCTTCTCCAGTC
JMFF008A11+                                       CCCTGTTCCCACCAATGGCCGCTTCTCCAGTC
                      ____________________________________________________________
consensus             TTCAGGGAGTTCGATCCTCCGCACGTATCCCTGTTCCCACCAATGGCCGCTTCTCCAGTC
 
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rJMFF008A11-          GTTGCTCGACCTAGCTTCTCGGACCTGCCTCCACAGGCCGCTGATTTCCAACACTTTCCG
JMFF008A11+           GTTGCTCGACCTAGCTTCTCGGACCTGCCTCCACAGGCCGCTGATTTCCAACACTTTCCG
                      ____________________________________________________________
consensus             GTTGCTCGACCTAGCTTCTCGGACCTGCCTCCACAGGCCGCTGATTTCCAACACTTTCCG
 
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rJMFF008A11-          GTTTGCTACGCAGATCTGAACTCCTGTCACTGGTAGTTCTGATTTGAGTATGTAGTCTGT
JMFF008A11+           GTTTGCTACGCAGATCTGAACTCCTGTCACTGGTAGTTCTGATTTGAGTATGTAGTCTGT
                      ____________________________________________________________
consensus             GTTTGCTACGCAGATCTGAACTCCTGTCACTGGTAGTTCTGATTTGAGTATGTAGTCTGT
 
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rJMFF008A11-          TTCCGTTTGGAGCCAATCGACGGTGCAGTGATTTGAGCAGCGGAGATTGGCCAACAGAA-
JMFF008A11+           TTCCGTTTGGAGCCAATCGACGGTGCAGTGATTTGAGCAGCGGAGATTGGCCAACAGAAC
                      ____________________________________________________________
consensus             TTCCGTTTGGAGCCAATCGACGGTGCAGTGATTTGAGCAGCGGAGATTGGCCAACAGAAC
 
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rJMFF008A11-          CGTCCGATTC-GAACTCCCATAGCGGGAAAGCGTCGGAAGGATCGAAGAATTTCCCGAAC
JMFF008A11+           CGTCCGATTCGGAACTCCCATAGCGGGAAAGCGTCGGAAGGATCGAAGAATTTCCCGAAC
                      ____________________________________________________________
consensus             CGTCCGATTCGGAACTCCCATAGCGGGAAAGCGTCGGAAGGATCGAAGAATTTCCCGAAC
 
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rJMFF008A11-          AGAAACGGACTGAAGAGTGAGCCTTGGGAGAAGACCTTCTGCGCCGCCGCGGTTGCGTTA
JMFF008A11+           AGAAACGGACTGAAGAGTGAGCCTTGGGAGAAGACCTTCTGCGCCGCCGCGGTTGCGTTA
                      ____________________________________________________________
consensus             AGAAACGGACTGAAGAGTGAGCCTTGGGAGAAGACCTTCTGCGCCGCCGCGGTTGCGTTA
 
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rJMFF008A11-          TTCCCCTTCTCCATTAAGCTGGCAAACGCGTCTTCCTTTAGCGGCACGCACCATTTCCGC
JMFF008A11+           TTCCCCTTCTCCATTAAGCTGGCAAACGCGTCTTCCTTTAGCGGCACGCACCATTTCCGC
                      ____________________________________________________________
consensus             TTCCCCTTCTCCATTAAGCTGGCAAACGCGTCTTCCTTTAGCGGCACGCACCATTTCCGC
 
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rJMFF008A11-          GGATTTGGATCTTCAAATCCAACCTCAAGCTGTTTGTAGCTTGTCATTCAATTCGCCCCG
JMFF008A11+           GGATTTGGATCTTCAAATCCAACCTCAAGCTGTTTGTAGCTTGTCATTCAATTCGCCCCG
                      ____________________________________________________________
consensus             GGATTTGGATCTTCAAATCCAACCTCAAGCTGTTTGTAGCTTGTCATTCAATTCGCCCCG
 
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rJMFF008A11-          TTGGGAAAATTTTAAGCTGCAGATTAGAGCTCTGCTGAAGAGAATTTGAGTTTGGGTGGT
JMFF008A11+           TTGGGAAAATTTTAAGCTGCAGATTAGAGCTCTGCTGAAGAGAATTTGAGTTTGGGTGGT
                      ____________________________________________________________
consensus             TTGGGAAAATTTTAAGCTGCAGATTAGAGCTCTGCTGAAGAGAATTTGAGTTTGGGTGGT
 
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rJMFF008A11-          TCTTTATAG                                                   
JMFF008A11+           TCTTTATAGTTCCGGTCGAGAAATGGCTATACAGAAGGAACAAATTCTCGTGGAGACATT
                      ____________________________________________________________
consensus             TCTTTATAGTTCCGGTCGAGAAATGGCTATACAGAAGGAACAAATTCTCGTGGAGACATT